Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0175 ATGGGAGCTCGTTGCTCTAAATTCTCCCTGTGTTGGTGGCCATCTCATATCAAATCAAACCTTCATGACTTGTCTGATAATGATGATGATGGGAAGAAGAATGAAAAAGATTCTTGGGCTGTGTTCACTGAGTACAGTTTGGATCAGCTGAAAGTTGCCACTTCAGGATTTTTACCAGACAACATTGTCTCAGAGCATGGTGAGAAGGCTCCCAATGTTGTCTACAGAGGAATGCTTGAAGATGATAGGTTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCCTAGAGGAAGCACGGGCAGTGGGGCAGCTAAGGAATGAAAGATTAGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCAGAGTTCATGCCTAATGAAACTCTCTCCAAACATCTCTTTCATTGGGAAACTCAGCCCATGAAATGGGCAATGAGGCTGAGAGTGGCCTTGTATTTAGCACAAGCTTTAGAATACTGCAGCATTAGAGGAAGGGCATTGTACCATGATCTTAATGCTTATAGAGTTTTGTTTGATCAGGAAGGCAATCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGTAGAGATGGCAGAAGCTATAGTACAAATTTAGCATTCACTCCTCCCGAGTACTTAAGGACAGGAAGAATCACCGCAGAAAGTGTAGTTTACAGTTTTGGTACCCTATTGCTTGATCTTCTGAGTGGAAAGCATATCCCACCCAGTCATGCACTTGACCTTATACGAGGCAAAAATTTTCTGTTGCTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGCGATTAGCTTCACGTTGTTTACAATATGAACCACGTGAGAGACCAAATGTTAAGTCACTTGTGACTGCTCTAACCTCTCTTCAGAAAGAAACTTCAGTACCATCATATGTTTTAATGGGCATACCAGATAGGAATCTGTCATCAAAGGAAACAGTTTCATTGATGCCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTGACCGCAATACATGAACTTTTGGAAAAGGTGGGCTACAAGGATGATGAAGATGTTGCAAATGAGCTGTCCTTCCAAATGTGGACAAATCAAATACAAGAAACTCTAAATTGTAAGAAGCAAGGCGATTCTGCTTTTCATGCCAAAGACTTCTCTATGGCCATTGAATGTTATACACAATTCATCGATGGTGGGACCATGGTATCACCAACTGTGTATGCCAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCGCTTGGAGACGCCATGCAAGCTCAATCGGTATCTCCCACATGGCCAACTGCATACTATCTTCAAGCAGCTGCTCTCTTCAGCCTTGGCATGGACAATGATGCACAGGAAAGTCTTAAAGATGGCACAACACTGGAAACAAGGAAGTATAGAAATTGA 1479 0.426 MGARCSKFSLCWWPSHIKSNLHDLSDNDDDGKKNEKDSWAVFTEYSLDQLKVATSGFLPDNIVSEHGEKAPNVVYRGMLEDDRLVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVALYLAQALEYCSIRGRALYHDLNAYRVLFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLLLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNVKSLVTALTSLQKETSVPSYVLMGIPDRNLSSKETVSLMPFGEACSRRDLTAIHELLEKVGYKDDEDVANELSFQMWTNQIQETLNCKKQGDSAFHAKDFSMAIECYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSVSPTWPTAYYLQAAALFSLGMDNDAQESLKDGTTLETRKYRN* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0175 492 Gene3D Phosphorylase Kinase; domain 1 30 135 - -
Apr5g0175 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 492 IPR045845 GO:0004672|GO:0009742
Apr5g0175 492 SUPERFAMILY TPR-like 389 488 IPR011990 GO:0005515
Apr5g0175 492 ProSiteProfiles Protein kinase domain profile. 60 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0175 492 Gene3D Tetratricopeptide repeat domain 385 491 IPR011990 GO:0005515
Apr5g0175 492 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 492 - -
Apr5g0175 492 SUPERFAMILY Protein kinase-like (PK-like) 39 320 IPR011009 -
Apr5g0175 492 Gene3D Transferase(Phosphotransferase) domain 1 137 329 - -
Apr5g0175 492 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0175 Apr-Chr5 1581267 1585344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0175 14 340 Glycoside Hydrolase AT3G07070 32.033 5.18e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Apr5g0175 PK_Tyr_Ser-Thr 3.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0175 - - gmx:732542 916.376