Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0171 ATGAACATGGACGAGCACATGCACGGAATGGGAGGGATGGGACCAACGCAGCCATCAACGAATGGGAGCATGACGATGCATCATAAGATGATGATGCACATGACCTTCTTCTGGGGAAAGGACGCGCAGATTCTCTTCTCAAGCTGGCCTGGAGGCAAATCTGGCATGTACGTGTTGGCCTTGGTCTGTGTGTTCGTGGTGGCTGTTTTCGTCGAGTTGCTCTCTCACACACGCTTCATCAAACCTGGTTTGAACCATGTGGTAGCAGGTTTGATTCAAACCTTGTTGCATGTCCTGAGGGTTGGTCTGGCTTACTTGGTCATGCTTGCACTCATGTCTTTCAATGGGGGTGTCTTCCTTGTTGCTTTGCTCGGTCATGCTTTGGGATTCTTCCTTTGTAGCATGGCCTTCAAAAAACCCCACCAAGATCAGGGATTTGATCTTCCCCCAATTTCATGTTAA 462 0.4913 MNMDEHMHGMGGMGPTQPSTNGSMTMHHKMMMHMTFFWGKDAQILFSSWPGGKSGMYVLALVCVFVVAVFVELLSHTRFIKPGLNHVVAGLIQTLLHVLRVGLAYLVMLALMSFNGGVFLVALLGHALGFFLCSMAFKKPHQDQGFDLPPISC* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0171 153 PANTHER COPPER TRANSPORTER 6-LIKE 1 152 - -
Apr5g0171 153 Pfam Ctr copper transporter family 34 78 IPR007274 GO:0005375|GO:0016021|GO:0035434
Apr5g0171 153 Pfam Ctr copper transporter family 87 133 IPR007274 GO:0005375|GO:0016021|GO:0035434
Apr5g0171 153 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 152 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0171 Apr-Chr5 1549012 1549686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0171 35 153 Inorganic Solute Cotransporters AT5G59030 52.419 6.32e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0171 K14686 - gmx:100306175 241.506