Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0165 ATGGAACAGGAGAAAGCCCTCATCTTGGAAGCTAGATCCATGCAGGAAATTGAGATACCCATTGTCTCTGATAGACTTGATGTTCCTCCAATGACAGTGGAGAGATCTTGCAGTTGTGTCTGTCCTTTTTCTGGGCATGAAAACAGTGCTGTGTCATCAGAAGAGTCATTAAAGTCGGCAAAGAAACTTTGTGGACTCATTTTTTTCTATGCTATTGTTATGGTTGTGGAAATTATTGGTGGTATAAAAGCTCACAGTTTAGCTGTTATTAGTGATGCAGCACACTTGCTTTCTGATATTGCTGGATTCTCCATCTCTCTCTTTGCAGTGTGGGCTTCCCGTTGGGAAGCAACTCCATATCAATCTTTTGGATACAATCGTCTTGAGGTTTTGGGTGCTCTCTTATCTGTGCAGTTAATTTGGTTGATATCTGGTTTTTTGATATATGAAGCAGTTGGTAGACTCGTTCTCCGAAATGCCAAGGTGAATGGAAAACTAATGTTTGCAATTGCAGCATTTGGGTTTGTCCTAAACTCTATCATGGTTGCATGGCTTGGTCATGATCATAGTCGTCATCATCATGGCTGTGATCATGATCATAGTCATCATCAGTGCCAGACTGATCATGATCATGGGAAGGAGGACATAACTAACATAACTGATGAGGAGAACCTTACCCTGGTATCAAGCAGTCATAGAGAGGCTACTGTATTGAACATAAATATCCAAGGGGCATATTTGCATGTCATGGCTGATATGATTCAATCTATTGGAGTGATGATTGCGGGAGCCATAATATGGGCTGAACCAGAGTGGTTTATAGTTGACCTTATATGCACTCTTATATTTTCTGTTTTATCTTTAAGTACTACTTTGCCCATGCTTAGGAATATTTATAGTATCCTAATGGAAGGGACACCCAGTGAAATCAACATCAGTAAGCTGGAAAAAGGCCTCAGAAGTATCAAGGGAGTGCAGGATGTTCATGATTTGCACGTCTGGGCTATAACTGTTGGAAAAAATGTTCTATGTTGCCATGTAGTGGCTGAGCCTGGCATCAGTCACATTGATCTACGTGGCGTGATTAAGTATTACTGTCAAAAAACATTCCAAATACAACATGTAACCATACAAATTGAGTAA 1143 0.4033 MEQEKALILEARSMQEIEIPIVSDRLDVPPMTVERSCSCVCPFSGHENSAVSSEESLKSAKKLCGLIFFYAIVMVVEIIGGIKAHSLAVISDAAHLLSDIAGFSISLFAVWASRWEATPYQSFGYNRLEVLGALLSVQLIWLISGFLIYEAVGRLVLRNAKVNGKLMFAIAAFGFVLNSIMVAWLGHDHSRHHHGCDHDHSHHQCQTDHDHGKEDITNITDEENLTLVSSSHREATVLNINIQGAYLHVMADMIQSIGVMIAGAIIWAEPEWFIVDLICTLIFSVLSLSTTLPMLRNIYSILMEGTPSEINISKLEKGLRSIKGVQDVHDLHVWAITVGKNVLCCHVVAEPGISHIDLRGVIKYYCQKTFQIQHVTIQIE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0165 380 SUPERFAMILY Cation efflux protein transmembrane domain-like 63 304 IPR027469 -
Apr5g0165 380 PANTHER METAL TOLERANCE PROTEIN B 1 380 - -
Apr5g0165 380 Pfam Cation efflux family 67 303 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Apr5g0165 380 TIGRFAM CDF: cation diffusion facilitator family transporter 61 380 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Apr5g0165 380 Gene3D Cation efflux protein transmembrane domain 59 302 IPR027469 -
Apr5g0165 380 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 307 380 IPR036837 -
Apr5g0165 380 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0165 Apr-Chr5 1517408 1519654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0165 1 380 Inorganic Solute Cotransporters AT2G29410 50.521 7.93e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0165 K14689 - gmx:100777590 573.163