Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0127 ATGGTGGGCTCAGGAACAACAACAACAACAGATAGAAGCAAAGAAGCTGTTGGGATGATGGCCCTTCACGAGGCCCTCAGAAGTGTATGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGGGTCAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAACGGTAGTTTGATGTTGATGTGGGAAGATGGGTTTTGCCGTGGAAGGCTTTCTTCAGATTGTTTGGAAGAGATTGACGGAGAGGATCCTATCAGAAAATCGTTTAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGTCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGAGCCTAATATTTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCACCTGAATGGATAGATCAGTTTGAGTCCGGCATTCAGACAATCGCTGTAATTCAAGCTGGGCATGGCCTTCTACAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTATCAATCAGGGTTTTACCTCTCCCAGCTTTTCTCTTCCACTAGGAACACTTCCTCTTCTACTTCACTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCTCCTCCACTCCTCAACTGGGGTCAAAGGCCAGTTGGGTCAGCTACTTCTATGCTATCCTCTCCCACCTTTCAACATGCAGCTAGATTGGGGTTCCCACAGGCTAAAGATGAGACTCATATGTTCCTCATGCCTCATGCATCTGAGCAAACAAGAATGGAAGACATGATGGGGGAACATGAAAATGACATAAAATGGCCAAATGGGTTATCCATATTCAATGCACTCACTGGAAGAACTGATGATGCTAAACTTTTGTTCAATCCAGATACCTCCAACATGCAAAATACTAGTGTGGCCAACCCAAATGAGTTTTTGAGCTTGGATAGCCACCCTGAAGGGACAAGGAAAGTGGACAAGTTTAAGAGGAGCTTCACTCTACCTTCTAGAGTGGCTTCCTCATCATCTTCAACTTCAATGGATCACCATCAACAAGCAACTATGGAGTATAGAAATTCAGAAGGAGGCATGTACCCTGATGTCATGGAGACATTTTTAGAATGA 1191 0.445 MVGSGTTTTTDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRLSSDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSTIPIRPPPPLLNWGQRPVGSATSMLSSPTFQHAARLGFPQAKDETHMFLMPHASEQTRMEDMMGEHENDIKWPNGLSIFNALTGRTDDAKLLFNPDTSNMQNTSVANPNEFLSLDSHPEGTRKVDKFKRSFTLPSRVASSSSSTSMDHHQQATMEYRNSEGGMYPDVMETFLE* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0127 396 PANTHER GB|AAF34833.1 1 396 - -
Apr5g0127 396 MobiDBLite consensus disorder prediction 212 234 - -
Apr5g0127 396 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 22 191 IPR025610 -
Apr5g0127 396 PANTHER GB|AAF34833.1 1 396 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0127 Apr-Chr5 1130954 1133739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0127 23 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.693 9.87e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0127 - - gmx:100789006 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0127 5 1130954 1133739 Apr5g0127 5 1130954 1133739 ECH