Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0125 ATGACCGGCAGAGAAATTCTTCATAAGATGAAGGAAAAAGTTTTGGGATCATCTGATCCTGACTCAGGTAAAGGAAAGAGCAAGATGAAGAAGCAGATAACTCATGGCTTTCACTTGGTAAAGGGAAGATCAGATCATGCTATGGAAGACTATGTTGTTGCTCAATTTAAGCAAGTTGATAACAATGAGTTAGGCTTATTTGCAATATTTGATGGCCACTCAGGTCACAGTGTACCTGATTACTTGAAGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTAACTTCTGGACAGAACCTGCGGATGCGGTCAAGACAGCATACATTATAACTGATTCCACTATTTTAGACAAATCAGGTGAACTGGGTAGAGGAGGTTCAACTGCTGTCACAGCAATATTGATCAATTGTCAGAAGCTAGTAGTGGCCAACATTGGGGATTCTCGTGCTGTTTTATGTAAGAACGGTGTGGCCAAACAACTATCAGTGGATCATGAACCAACCACAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTGTCAAACTTTCCAGGGGACGTTCCACGTGTTGATGGTCAGTTAGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGAAACACTTAAGCTCAGAGCCTCATGTGACTGTGGAGATGATAGATGATGATGCAGAGTTTGTAATTTTAGCTAGTGATGGGTTGTGGAAGGTAATGTCCAATCAAGAAGCAGTTGATGCCATCAAAGATATAAAGGATGCTAGATCTGCAGCAAAGCTCCTTACTGAAGAAGCAAAAAACAGGAAAAGCTCAGATGATATCTCTTGCGTTGTTGTGAGATTTCAGTGA 849 0.4075 MTGREILHKMKEKVLGSSDPDSGKGKSKMKKQITHGFHLVKGRSDHAMEDYVVAQFKQVDNNELGLFAIFDGHSGHSVPDYLKSHLFDNILKEPNFWTEPADAVKTAYIITDSTILDKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCKNGVAKQLSVDHEPTTESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPHVTVEMIDDDAEFVILASDGLWKVMSNQEAVDAIKDIKDARSAAKLLTEEAKNRKSSDDISCVVVRFQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0125 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Apr5g0125 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Apr5g0125 282 Gene3D - 16 282 IPR036457 -
Apr5g0125 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Apr5g0125 282 SMART PP2C_4 24 279 IPR001932 -
Apr5g0125 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Apr5g0125 282 CDD PP2Cc 35 281 IPR001932 -
Apr5g0125 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0125 Apr-Chr5 1120590 1125465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0125 1 282 PP2C-type Phosphatase Gene Family AT3G15260 78.893 4.14e-168 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0125 K17506 - gmx:100787942 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0125 5 1120590 1125465 Apr5g0125 5 1120590 1125465 ECH