Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0119 ATGGAGTTTCAAACCCCTCTTTGCCTTTTCTTGTTTCTCTTCACTCTTCTTCCAAGCTCCCAAGCCTACCAATTTACTGTTGGGGGAAGCCAAGGATGGGTTCCAAACCCTTCCCAGAGTTACAATCAATGGGCTGGAAATAACAGGTTCCAAATCAATGACACAATAGTTTTCAAGTACAAGAAGGGATCAGACTCGGTTTTGGAAGTGAAGAAAGATGATTATGACAATTGCAATAACACAAAGCCAGTTAAGAAATTTGAAGACGGAGACACAGTGTTCAAGTTTGATCGATCAGGACCATTCTACTTCATTAGTGGAAAAGATGGAAACTGTGGAAAGGGTCAAAAATTGATCGTTGTTGTGTTGTCCCCAAGAACACCACCATCACAGTCACCACCACCAAAACCTTCACCTTCCCCGTCTCCAAATCCAAACCCACCACCATCGTCCCCACCAACCTCACCATCTCCGGCGGGTCAACCTCCGACTTCATCTCCCTCTCCGACACCTACCGTCCAACCTCCGGCGACGTCTCCGGCACCGACTGGAAAATCACCTTCGCCATCTCCATCAGCCACATCGCCAACTCCGTCTCCGACGGCCTCCACGCCTGGGCCGTCTCCGGCAACTACATCACCCTCTCCGTCTCCGATTATCTCCCCGCCAGCTCCGTCGCCGACTACATCACCGTCTCCCTCAAGCTCCCCGCCGGCTCCGTCTCCCACAAGCTCCCCGCCAGCTCCGTCTCCGCCTACACCGTCACCTTCTTCTCCGACGGGACCAACTCCGTCGCCAGCGTCTAATTCAACGGCGCCGCCACCGGGAAGCGGTGGTTCATCATCTGTGGCTCCTTCAAGCTTTTGGGTGTATTTGCTAACTATGGGTGTTGGTGTTGCGCTGTTGCGTTATTGA 915 0.5246 MEFQTPLCLFLFLFTLLPSSQAYQFTVGGSQGWVPNPSQSYNQWAGNNRFQINDTIVFKYKKGSDSVLEVKKDDYDNCNNTKPVKKFEDGDTVFKFDRSGPFYFISGKDGNCGKGQKLIVVVLSPRTPPSQSPPPKPSPSPSPNPNPPPSSPPTSPSPAGQPPTSSPSPTPTVQPPATSPAPTGKSPSPSPSATSPTPSPTASTPGPSPATTSPSPSPIISPPAPSPTTSPSPSSSPPAPSPTSSPPAPSPPTPSPSSPTGPTPSPASNSTAPPPGSGGSSSVAPSSFWVYLLTMGVGVALLRY* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0119 304 CDD OsENODL1_like 23 123 IPR041846 -
Apr5g0119 304 Gene3D - 21 126 IPR008972 -
Apr5g0119 304 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Apr5g0119 304 PRINTS Proline rich extensin signature 126 138 - -
Apr5g0119 304 PRINTS Proline rich extensin signature 138 159 - -
Apr5g0119 304 PRINTS Proline rich extensin signature 160 176 - -
Apr5g0119 304 PRINTS Proline rich extensin signature 179 196 - -
Apr5g0119 304 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Apr5g0119 304 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Apr5g0119 304 PANTHER BLUE COPPER PROTEIN 1 302 IPR039391 GO:0009055
Apr5g0119 304 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 302 - -
Apr5g0119 304 MobiDBLite consensus disorder prediction 125 284 - -
Apr5g0119 304 MobiDBLite consensus disorder prediction 127 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0119 Apr-Chr5 1057374 1058846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0119 7 192 Phytocyanin Superfamily AT5G53870 51.020 1.53e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0119 - - aprc:113865536 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0119 5 1057374 1058846 Apr5g0119 5 1057374 1058846 ECH