Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0091 ATGGAACAGGAGATGCAAGACAGAGAGTCTCAAACTAATTACAGAGTGCAAGAGGAAGTGCCTGACATATTTCACAAAGGGAATCCTCCAGTAACAGTAAAGTTTCATGATGTTGTCTATAAAATTAAGACCAAAAAGTGGGGATTGCTTGAGAAGAACACAAAGGCAGAAGAGAAAGTAATACTGAATGGAGTGACAGGCATGGTTCAACCTGGTGAAATTCTGGCCATGTTAGGTCCATCTGGAAGTGGCAAAACAACTCTACTAGCAGCATTGGGGGGCAGGCTTGGAGGGAAACTCTATGGAAGCATAACATACAATGGAAAAGCCTTTTCAAGTGCAACGAAAAGGAGCACTGGTTTTGTTACACAAGATGATGTTCTCTATCCCCACTTGACTGTGACTGAAACTCTAGTATTCACTGCCCTTCTAAGATTGCCAAGTAGTTTAACCAAAGAAGAGAAAATTGTGCACGCAAAAGCGGTTATAGATCAACTTGGTTTAACCAAGTGCAAGGATAGCATCATTGGAGGGCCATTGCTAAGAGGGGTTTCTGGTGGTGAGAGAAAAAGGGTTAGTATTGGACAAGAAATGCTCATAAACCCAAGCTTGTTGTTTCTTGATGAACCAACCTCTGGCCTAGACTCAACAACTGCACAAAGAATTGTCTTAACTTTGTGGGAGCTAGCAAATGGAGGGAGAACTGTTGTGATGACAATACATCAACCTTCAAGTAGGATATACTATATGTTTCATAGAGTGTTATTGCTTTCAGAAGGAAACCTATTGTATTTTGGAAAAGGGTCTGAAGCTATTGAATACTTTTCAAATATTGGATATGCCCCTATAATGGCCATGAACCCCTCAGATTTTCTTTTGGATCTTGCAAATGGTGTCTATACTAATCAACCGAATGAAGACCATGCCTCAAATAAGCATATATTGATTTCTTCATACAAGAACTACTTCAATGCCAAATTGAAGCCGGTTCTCTATGAAGTTCCTGATTATGATATAAGTCAGGGTGAATTTGAAGACAGTGGCTTTGGTGAATGGCCAAATAGTTGGTCGCAACAATTCCTTGTGCTGCTGAAAAGAAATGTCAAAGAGAGAAAATATGAATCATTCTCTGGCATGCGGATTTGTCAGATTCTTGTAGCTGCTCTTATTTCAGGATTACTATGGTATAAATCCGATATTTCACATTTGCGGGATCAGATTGGACTTTTATTCTTCATTTCTAGCTTCTGGGGTGCCATGCCTCTCTACCATGCAATATTTACCTTCCCCCGAGAGCTAACAATGTTGGAGAAGGAAAGATCCTCTGGAATGTACAGACTCTCCTCCTATTTCATGTCAATGGCGGTAGGTGACCTTCCAATGGAGCTTGTGCTTCCCACCATATTTCTTATCATAAACTATTGGATGGCAGGCCTGAAAGCTAATGTGGTAAACTTTTTATACACATTGTTCAGTGTCCTACTCAATGTGTTAGTTGCAGAAGGAATGGGCCTTGCAATTGGTGCTGTTGTAATGGATCAGAAATCAGCAACCACACTTGCCTCAGTGATCATGCTAAGTTTTGTTCTAGTTGGTGGATACTATGTTCAACATGTGCCAAAATTTATAGCATGGTTGAAGTACATCTCCATCAACCACTACATATACAAGCTCTTGGTGGGGTCTCAGTATGACACTAATGACACATACCCATGTTCTGATGGACAATGTTTGGTTGCTGAATTTCCAATGATAAAGCAAATGGGGCTACATTTTGAAGGGCAAATCATGGCTGCATTGGCTCTATTCATAATGCTAATTGGCTTTAGACTAGTGGCTTATTTTGCTCTTATGAGGGTTGGGGTGACAAAGTAA 1875 0.4043 MEQEMQDRESQTNYRVQEEVPDIFHKGNPPVTVKFHDVVYKIKTKKWGLLEKNTKAEEKVILNGVTGMVQPGEILAMLGPSGSGKTTLLAALGGRLGGKLYGSITYNGKAFSSATKRSTGFVTQDDVLYPHLTVTETLVFTALLRLPSSLTKEEKIVHAKAVIDQLGLTKCKDSIIGGPLLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRIVLTLWELANGGRTVVMTIHQPSSRIYYMFHRVLLLSEGNLLYFGKGSEAIEYFSNIGYAPIMAMNPSDFLLDLANGVYTNQPNEDHASNKHILISSYKNYFNAKLKPVLYEVPDYDISQGEFEDSGFGEWPNSWSQQFLVLLKRNVKERKYESFSGMRICQILVAALISGLLWYKSDISHLRDQIGLLFFISSFWGAMPLYHAIFTFPRELTMLEKERSSGMYRLSSYFMSMAVGDLPMELVLPTIFLIINYWMAGLKANVVNFLYTLFSVLLNVLVAEGMGLAIGAVVMDQKSATTLASVIMLSFVLVGGYYVQHVPKFIAWLKYISINHYIYKLLVGSQYDTNDTYPCSDGQCLVAEFPMIKQMGLHFEGQIMAALALFIMLIGFRLVAYFALMRVGVTK* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0091 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 284 IPR003439 GO:0005524
Apr5g0091 624 SMART AAA_5 71 261 IPR003593 -
Apr5g0091 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 621 - -
Apr5g0091 624 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
Apr5g0091 624 Gene3D - 50 278 IPR027417 -
Apr5g0091 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 276 IPR027417 -
Apr5g0091 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 19 621 - -
Apr5g0091 624 Pfam ABC transporter 62 212 IPR003439 GO:0005524
Apr5g0091 624 Pfam ABC-2 type transporter 358 564 IPR013525 GO:0016020|GO:0140359
Apr5g0091 624 Pfam ABC-2 type transporter 241 309 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0091 Apr-Chr5 841088 844489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0091 61 407 Calmodulin-binding Proteins AT2G36910 24.110 6.68e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0091 K05681 - gmx:100812397 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0091 5 841088 844489 Apr5g0091 5 841088 844489 ECH