Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0083 ATGAGGATACCATTTTGTCTAGCTTTTCTTCTATACTTGTGTAAGGAATCACTTGCCTCTTTCATTCCCATAGATAATTATTTAGTTGCATGTGGTTCTTCCGACAAACTCACCTTTCAGGATCGAACTTTCATTCCTGACTCTGAACATGCCAACGTAGAAATAAAAGCCATGAAATCTGTGGCACTTACCACTAAACATGGTGTCCCTTCTCCATTGTATCAGTCAGCTCGAGTCTTCTCAGAACAGTCATCATATAAATTCAAAATTGAACAACAAGGGAGGCATTGGATCCGCCTTTATTTTCACCCTTTTCCTCATTCAAACCCCAACATGGCCTTTGCCTCAATAACAGTAGTCACTGATAATAGTTTTGTGCTTCTCAATAATTTCATATTCCAAGACAACAAGGACTCTTACTTGTTCAAGGAATATGTAATCATTGTAACATCAAATGAGTTGTTACTCACATTCATCCCTCACCACAATTCAATTGTGTTTGTTAATGCTGTTGAAGTTGTCTCTATGCCAGATTTGCTCTTTCCTCAACTTCTAAACCCACCAGTACCTTCAAATTTTGCCCTTGAAACTGTCTACCGGTTGAATATTGGTGGTGCATCCATTGCTTCTCATGATGACATCCTTAGTAGGACTTGGGAGAATGATGAAATCTACTTTCACTCTGCAAGTACTGCTGTTAATATTTCAACAAACACTTCATCTATAAAGCCTATGGATTTTTTACCAATTACAGCACCACCATTGGTTTATGCTAGTGCCAAAGCCTGGGGAGATGATGCTACATCGGGGTCCAGATTAAGCTGGAATTTCTCTGTAAGTCCTGATTTTATATATTTTGTTCGGATTCATTTCTGTAACATAATTAGCAACGTTTCCAACTCTCTTCATTTGGACCTATTTATAAATGAAGGCATTACACTAAAAAGCCTTGTCCTGTCTTTTCTCACTGGTGACCTTGCTGAGCCATATTTCAAGGGTTTTGTCACCAACGGCAAAGGAAATAGTTTGACAGTAAGTGTTAGTCCTGACATGATGACCGATTCCACAAATGCAACCATGAATGGGTTGGAGATATTGAAGATCAGCAACGATTTCGGTAGCTTAGATGGGTTTTCCTCTGTTGACGATATTCTTACCAAATCTTCAAAAATAAGTACAAAATTAAAAGTCATTATAATTGGTTGCACTGTTAGTGTTTTTATGTTTCTAGCATTTCTTGGGCTGTCACTTTGTTACTTAATAGCTCGCAGGAGAGAAAAAAAATCAGAAATCACTTTCAAATTTCCAAAACGTTTTACTTTACAAGCAATCAAGCAAGCCACCAATGATTTTGACCAGAGCCTGCTGATTGGAGAAGGAGGATTTGGCAAGGTGTATCAAGGAACACTAGAAAATGGGGAAACTGTAGCAATCAAAGTAGCAAATCATGAATCCAAACAAGGTCTCAATGAGTTCCATAATGAGATAGAATTGTTATCTGGACTTGGCCATCCAAACCTTGTATCTCTTATAGGATGCTGTACTGAAAATTCAGAACTGATTCTGGTATACAAATACATGGCAAAAGGATCTTTCAGTAGTCATCTTTATGGGACAGACTTTGTTCCTCTATCATGGAAGCAACGTCTTGGGATATGCATTGGGGCTGCAAAGGGACTTTGCTATCTTCACTTTGGAGCTAAACATAGCATAATTCATCGTGATGTGAAGACAGCAAACATTCTCTTGGATGAAAATCTTGTGGCAAAAGTTGCTGATTTTGGGATCTCAAAAAAGGGTCGTCTTGATAAAAGCCATGTGACAACCAATGTAAAGGGTAGTTTTGGATACCTTGATCCTGATTATTTTAGGACCAAGTGTCTCACTGAGAAATCAGATGTTTATTCATTTGGGGCAGTGTTGATTGAAGTTATCTGCGGCAAGCCTGCTTTAGATGATGCGCGTCCAACACAGCATGTTAATTTGGCAATTTGGGCATTAAATTGCCATGAAAATGGCACCTTTCATGAAATGATGGACCCATATTTGATTGGTAAAGTGAATATGGATTCTTTAACTAAGGTTTCTGAGTTGGCTTGGAAGTGCTTGCACGATAGTCGGGTGAAAAGGCCTCCAATGGCGTACGTATTGTGTCAACTTGAAGAGGCTCTTCATCTTGAGTTGTCATCACCACTTTGTAATGGAAGTGCAGATTCTGTCTCCCATGCCCATTTAGAAAATGGATTCGCAAATGGTATAGAAGATGTTGCTTAA 2274 0.3874 MRIPFCLAFLLYLCKESLASFIPIDNYLVACGSSDKLTFQDRTFIPDSEHANVEIKAMKSVALTTKHGVPSPLYQSARVFSEQSSYKFKIEQQGRHWIRLYFHPFPHSNPNMAFASITVVTDNSFVLLNNFIFQDNKDSYLFKEYVIIVTSNELLLTFIPHHNSIVFVNAVEVVSMPDLLFPQLLNPPVPSNFALETVYRLNIGGASIASHDDILSRTWENDEIYFHSASTAVNISTNTSSIKPMDFLPITAPPLVYASAKAWGDDATSGSRLSWNFSVSPDFIYFVRIHFCNIISNVSNSLHLDLFINEGITLKSLVLSFLTGDLAEPYFKGFVTNGKGNSLTVSVSPDMMTDSTNATMNGLEILKISNDFGSLDGFSSVDDILTKSSKISTKLKVIIIGCTVSVFMFLAFLGLSLCYLIARRREKKSEITFKFPKRFTLQAIKQATNDFDQSLLIGEGGFGKVYQGTLENGETVAIKVANHESKQGLNEFHNEIELLSGLGHPNLVSLIGCCTENSELILVYKYMAKGSFSSHLYGTDFVPLSWKQRLGICIGAAKGLCYLHFGAKHSIIHRDVKTANILLDENLVAKVADFGISKKGRLDKSHVTTNVKGSFGYLDPDYFRTKCLTEKSDVYSFGAVLIEVICGKPALDDARPTQHVNLAIWALNCHENGTFHEMMDPYLIGKVNMDSLTKVSELAWKCLHDSRVKRPPMAYVLCQLEEALHLELSSPLCNGSADSVSHAHLENGFANGIEDVA* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0083 757 Pfam Malectin-like domain 30 367 IPR024788 -
Apr5g0083 757 Gene3D Phosphorylase Kinase; domain 1 421 526 - -
Apr5g0083 757 PANTHER OS07G0166700 PROTEIN 13 736 IPR045272 GO:0004714|GO:0006468
Apr5g0083 757 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 13 736 - -
Apr5g0083 757 Pfam Protein tyrosine and serine/threonine kinase 456 716 IPR001245 GO:0004672|GO:0006468
Apr5g0083 757 SMART serkin_6 451 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0083 757 Gene3D Transferase(Phosphotransferase) domain 1 527 730 - -
Apr5g0083 757 ProSitePatterns Protein kinases ATP-binding region signature. 457 479 IPR017441 GO:0005524
Apr5g0083 757 ProSiteProfiles Protein kinase domain profile. 451 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0083 757 CDD STKc_IRAK 457 722 - -
Apr5g0083 757 Gene3D - 26 176 - -
Apr5g0083 757 Gene3D - 193 370 - -
Apr5g0083 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Apr5g0083 757 SUPERFAMILY Protein kinase-like (PK-like) 430 720 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0083 Apr-Chr5 769474 771835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0083 19 740 Receptor kinase-like Gene Family AT2G21480 41.527 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr5g0083 Malectin_like 2.2e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0083 - - mtr:MTR_8g467150 919.072