Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0071 ATGGTGTTATCAGCTTCGCCATGTTCCTTGGCGAGGAGCTCGCTGGAAGAGATGCTTGATTCGCTTCGACGGAGGGACGAAGAGGAAGAAAAGAAAAAGGACTCGCCGCCGGCGTTGCCTGCGAGGCCGGCCTCGCGGGCCCGGCTTCCTCCGGCGCGACGATCACTGCCTAATGACTTTAAGGTAGGCGGCAGCGACCAAGTTGTCGTGCCGGAGAAGGGAATTGGTTCCAATGAAGATGGTGAGGTGAAGGAAAAAGACTCGGGGCATAAGAGGAGGAGGAGTGATTTTGGAAACAAAAGGATGAAGAGGGATGAGGAGTCGCCTTATGTGACAGTATCTTCCGCTGCTTCATCAGGGATGGTTTGGGAATTGGAGGGTGATGATCACATTTCTTATTTCATGAAAAAGAAGCTTCGGGTTTGGTGTAGGCAACCAAGAGGGCAATGGGAGCTAGGAACGATACAGTCAACTTCAGGAGAGGAAGCACGTGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGCCAGATCAGAGATCCTACCAGCTAATCCTGATATTTTGGAGGGTGTGGATGATCTTATTAAGCTTGGTTATCTGAATGAGCCATCGGTTCTTCACAATCTTAAGTCTAGATATTCTCGGGGGATGATTTATAGTAAAGCGGGGCCTGTTTTAATTGCACTGAATCCCTTCAAAGATCTTCAGATTTATGGAAATGATTATGTCTCAGCATATAGGCAGAGATCTGTTGATAGTCCTCATGTTTATGCTATGGCAGATGCAGCTTATAACAATATGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGGGAGTGGATCAGGGAAGACAGAGACAGCTAAAATTGCATTACAATACTTAGTTGTTCTTGGTGGTGGTGGCAGTGGCAGTTATGGAATAGAAAAGGAAATTCTTCAGACAAATTGTATTCTGGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTCATTTCAGCTCCATGGGTAAAATATGTGGGGCCAAAATTCAAACCTTTCTGTTGGAAAAGTCCAGAGTTGTTCAACTGGCCAGTGGTGAGAGATCCTATCACATATTCTATCAACTTTGTGCTGGATCTTCGTCTGGTCTTAAAGAGAAATTGAATCTTAGAGCAGTCAGTGAATATAAATATCTAAACCAGAGTGACTGCATGATAATTGATGCTGTTGATGATGCTAAAAACTTTCATCAGCTGATGAAAGCGTTGGACACTGTTCAAATTTGTAAAGAGGATCAAGAGCTGATCTTTAAGATGCTTGCTGCAATACTATGGATGGGAAATATATCATTCCATATTACTGACAGTGAAAATCACATTGAGGTTGTTGATGATGAAGCTGTAATCAGTGCTGCCCGGCTGATGGGTTGTAGTTCCCTGGATTTAGTGGCGGCACTATCTACCCATAAAATCCATTCTGACAAGGATACTATTGCCAAAAGTTTGACATTGCGTCAGGCAATTGAAAGAAGAGATGCAATTGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAAAAAAGTACTAGGAAATCCATAAGTATCCTTGATATTTATGGATTTCAGACATTCCAGACAAACAACTTTGAACAGTTTTGTATAAATTATGCCAATGAGAGACTTCAACAACATTTTAATCGGCATTTGTTTAAACTTGAGCAGCAGGACTATGAATTGGATGGTGTTGATTGGACTAATGTAGATTTTGAGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCTGTGGGTCTTATCTCTTTGTTGGATGAGGAGTCAAGTTTACCCAAGGCTTCGGATTTAACATTTGCTAACAAACTTAAGCATCGTCTAGATGCTAATCCTTGCTTCAAAGGTGAAAGAGGCAGAGCTTTCCGAGTTCGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATACATTGTCTTTTGATTCCATTCAACTCCTGTCATCATGTAATTGTAAACTGCTGCAGCTGTTCTCCAAAATGTTTAACCAGTGTCAAAAGCAGAGTGTTGGAACTAAATTCAAGGATCAATTGTTCAAGTTGATGCACCATTTGGAGAGCACCAACCCTCACTTTATTCGCTGCATAAAGCCAAATACTAAGCAGCTTCCTGGCATTTATGATGATGACCTTGTCCTACAACAGCTCAGGTTTTTTGGAGTTCTACAAGTTGTTAGACTTTCAAGAGCTGGATATCCTACTCGCATGACCCATCAAGAGTTTTCAAGAAGGTATGGATTTCTGCTTTCTGAGGGCAATGTATCCAAGGATCCATTGAGCATATCAGTTGCTGTTTTGCAAAACTTTAACATCCCTTCTGAAATGTACCAAGTTGGCTACACCAAATTGTTTCTTCGAGCAGGGCAGATTGGTGCACTGGAGGACAAGAGGAAACATGTTTTGCAGGGAATACTTGGGATTCAAAAATACTTCCGTGGTTGTCAAGCTCGTGGTTATTTCCGTGAACTTAAGAATGGAGTCACAACATTACAATCATTTATTCGTGGAGAAATTACAAGAAGGAAATATGGTGTTGCGATGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGGTGGCTGGTTAGAAAGGATGTTAGTCACATGAATAACATGATTAGGTTGAAGAAACATCCTGAAAATGCTAAACCTAGGCGGAAGTCCCGTATGAAGATACCAGAAGTAAAGGATTTATCTAGAGAGCCTGTGCAGAATCTACTTACTGCTTTTGCTGAACTCAAAAAGCAGTTTGAGAAAGCTGATTCAATAGTGGAGCAAAAGGAAGAGGAAAATACTGAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGAGGATAGAATATGAGACAAAAATGAAATCAATGGAGGATGCTTGGCAAAAACAAATGGCATCTTTGCAAATGAGTCTTGTTGCAGCTAGAAAAAGCCTTGCTCCCGAGAATGCTATCGTTCAACCTGTAAGACGTGATCTTGTGTCGCCTCGCGGTTATGATTCTGAAGATGCTATTTCCATGGGATCTCGAACACCTGGTGGGAGCACACCAAAGTTTTCTAGTAGTCTATCTGTCTCTGATGCAGGGAGACAGGTCAATGGTACATTGACCACAGTCAGCAATCTGATGAAGGAATTTGAGCAGCAAAGGCAGAACTTTGACGACGAAGTAAAAGCTCTGATTGAGGTTAAACAGGGGCAGTCTACCACTGCAAAATCCGGTGAAGAACTTCAGAAACTTAAACATAGATTTGAAGGATGGAAGACACAGTACAAGGTTAGATTACGTGAGGCTAAAACAAGGCTTCGAAAGTTAGGAAATTCAGAAACTGAGAAAAGCCGGCGAACATGGTGGGAGAAGTTAAGCTTAAGAGCATAA 3564 0.4122 MVLSASPCSLARSSLEEMLDSLRRRDEEEEKKKDSPPALPARPASRARLPPARRSLPNDFKVGGSDQVVVPEKGIGSNEDGEVKEKDSGHKRRRSDFGNKRMKRDEESPYVTVSSAASSGMVWELEGDDHISYFMKKKLRVWCRQPRGQWELGTIQSTSGEEARVSLSNGNVMKVARSEILPANPDILEGVDDLIKLGYLNEPSVLHNLKSRYSRGMIYSKAGPVLIALNPFKDLQIYGNDYVSAYRQRSVDSPHVYAMADAAYNNMIRDEVNQSIIISGGSGSGKTETAKIALQYLVVLGGGGSGSYGIEKEILQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSSMGKICGAKIQTFLLEKSRVVQLASGERSYHIFYQLCAGSSSGLKEKLNLRAVSEYKYLNQSDCMIIDAVDDAKNFHQLMKALDTVQICKEDQELIFKMLAAILWMGNISFHITDSENHIEVVDDEAVISAARLMGCSSLDLVAALSTHKIHSDKDTIAKSLTLRQAIERRDAIAKFIYASLFDWLVEQVNKSLEVGKKSTRKSISILDIYGFQTFQTNNFEQFCINYANERLQQHFNRHLFKLEQQDYELDGVDWTNVDFEDNQGCLDLFEKKPVGLISLLDEESSLPKASDLTFANKLKHRLDANPCFKGERGRAFRVRHYAGEVLYDTNGFLEKNRDTLSFDSIQLLSSCNCKLLQLFSKMFNQCQKQSVGTKFKDQLFKLMHHLESTNPHFIRCIKPNTKQLPGIYDDDLVLQQLRFFGVLQVVRLSRAGYPTRMTHQEFSRRYGFLLSEGNVSKDPLSISVAVLQNFNIPSEMYQVGYTKLFLRAGQIGALEDKRKHVLQGILGIQKYFRGCQARGYFRELKNGVTTLQSFIRGEITRRKYGVAMKSSITIYSRKLEEIHAIILLQSVIRGWLVRKDVSHMNNMIRLKKHPENAKPRRKSRMKIPEVKDLSREPVQNLLTAFAELKKQFEKADSIVEQKEEENTELREQLKQSERKRIEYETKMKSMEDAWQKQMASLQMSLVAARKSLAPENAIVQPVRRDLVSPRGYDSEDAISMGSRTPGGSTPKFSSSLSVSDAGRQVNGTLTTVSNLMKEFEQQRQNFDDEVKALIEVKQGQSTTAKSGEELQKLKHRFEGWKTQYKVRLREAKTRLRKLGNSETEKSRRTWWEKLSLRA* 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0071 1187 Coils Coil 1098 1125 - -
Apr5g0071 1187 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 ProSiteProfiles Myosin motor domain profile. 189 848 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 Gene3D Kinesin motor domain 188 781 IPR036961 -
Apr5g0071 1187 ProSiteProfiles IQ motif profile. 852 879 IPR000048 GO:0005515
Apr5g0071 1187 Gene3D - 375 431 - -
Apr5g0071 1187 PANTHER MYOSIN-2 ISOFORM X1 124 1186 - -
Apr5g0071 1187 ProSiteProfiles IQ motif profile. 873 902 IPR000048 GO:0005515
Apr5g0071 1187 Gene3D Myosin VI head, motor domain, U50 subdomain 432 540 - -
Apr5g0071 1187 SMART MYSc_2a 183 849 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 MobiDBLite consensus disorder prediction 17 37 - -
Apr5g0071 1187 Pfam IQ calmodulin-binding motif 877 893 IPR000048 GO:0005515
Apr5g0071 1187 Pfam IQ calmodulin-binding motif 912 929 IPR000048 GO:0005515
Apr5g0071 1187 Gene3D - 782 849 - -
Apr5g0071 1187 Coils Coil 974 1022 - -
Apr5g0071 1187 Gene3D - 563 738 - -
Apr5g0071 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 894 IPR027417 -
Apr5g0071 1187 CDD MYSc_Myo8 203 836 IPR036022 -
Apr5g0071 1187 Coils Coil 12 32 - -
Apr5g0071 1187 ProSiteProfiles IQ motif profile. 910 938 IPR000048 GO:0005515
Apr5g0071 1187 PANTHER MYOSIN 124 1186 - -
Apr5g0071 1187 Pfam Myosin head (motor domain) 191 836 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 MobiDBLite consensus disorder prediction 1058 1088 - -
Apr5g0071 1187 MobiDBLite consensus disorder prediction 14 111 - -
Apr5g0071 1187 MobiDBLite consensus disorder prediction 1070 1088 - -
Apr5g0071 1187 Gene3D - 854 900 - -
Apr5g0071 1187 MobiDBLite consensus disorder prediction 77 108 - -
Apr5g0071 1187 PRINTS Myosin heavy chain signature 219 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 PRINTS Myosin heavy chain signature 273 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 PRINTS Myosin heavy chain signature 319 346 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 PRINTS Myosin heavy chain signature 551 579 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 PRINTS Myosin heavy chain signature 604 632 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr5g0071 1187 SMART iq_5 872 894 IPR000048 GO:0005515
Apr5g0071 1187 SMART iq_5 909 931 IPR000048 GO:0005515
Apr5g0071 1187 SMART iq_5 849 871 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0071 Apr-Chr5 673195 684863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0071 1 1182 Myosins gene family AT5G54280 59.497 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0071 K10357 - gmx:100802074 1804.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0071 5 673195 684863 Apr5g0071 5 673195 684863 ECH