Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0060 ATGCAAAGCAGAACCATTGCCCCCACAAAGCCAACAAAGAGAGAAATTGATTCTAAGAAAATGGAAGAGTGTTGTGCGCTGTGTGAGAAGAGAGCCATGATGCAGTGCGATTCGGACCAGGCTAAGCTATGTTGGGACTGCGATGAGAAAGTTCACAGTGCCAATTTCTTGGTCGCAAAGCATTCGAGGATTTTGTTGTGTCGTTTGTGTCATTCTCTCACTCCTTGGAAGGCTTCCGGCACCAAACTCACACCCACTGTTTCTTTCTGTCATCGTTGCGTCGCAGATCGACACAACAGGTTCACCCAATTGGACCGTAATGAGCAACTGCATCCGAACTATGTGGATGAGGATGGGGAATATGGCCATGCCCGTCATCATCATGATGATGATAATGATGATGATGAAGGAGAAGATGATGATGAAGAAGGAGAGAATCAAGTGGTTCCAATGTCCTCTGCTTCTGCCTCGTCACCACCAAGTGCCTCTGATTTAGCATTGAAGCGGTTGCGAAATAACTCTTTCTCTGTCGATTCTCATGAAGAGACAGGGTGTTCTTCATCTGAGATGCATAGTGGTGCAATGCCCAGTAGTGATGAATCAACCTCTATGAGCGTCTTTGGGTCATTGAAGAAGCATCGAAATGATGAGCGAAATTACTGA 663 0.46 MQSRTIAPTKPTKREIDSKKMEECCALCEKRAMMQCDSDQAKLCWDCDEKVHSANFLVAKHSRILLCRLCHSLTPWKASGTKLTPTVSFCHRCVADRHNRFTQLDRNEQLHPNYVDEDGEYGHARHHHDDDNDDDEGEDDDEEGENQVVPMSSASASSPPSASDLALKRLRNNSFSVDSHEETGCSSSEMHSGAMPSSDESTSMSVFGSLKKHRNDERNY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0060 220 MobiDBLite consensus disorder prediction 104 132 - -
Apr5g0060 220 CDD Bbox1_BBX-like 24 66 - -
Apr5g0060 220 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 21 202 - -
Apr5g0060 220 MobiDBLite consensus disorder prediction 104 220 - -
Apr5g0060 220 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 21 202 - -
Apr5g0060 220 MobiDBLite consensus disorder prediction 148 209 - -
Apr5g0060 220 SMART bboxneu5 20 66 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0060 Apr-Chr5 577926 579265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0060 21 109 C2C2-CO-like Transcription Factor Family AT4G27310 55.789 1.57e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0060 - - gmx:100818267 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0060 5 577926 579265 Apr5g0060 5 577926 579265 ECH