Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0057 ATGGCATCGACTTTTTCTTCAGCCACCTTTACGTCCATATCAACACTGTTTTGCTTCTGCATGTTTTGCATCAATGCAACAACCAACAAAGAATTCATACTAATGGGGCAATCATTGGGAACTTCAGACACCATTGTTTCTTACGGTGGCAACTTTGAACTGGGCTTTTTCTCCAGAATCAGAGACAGCACCACCAAGTACTACATAGGCATATGGTTTAAAAAAGTTCCACACGACAAGGTTGTGTGGGTTGCTAATAGAGATTACGCAGTTCAAACATCCTCAGCAGTTCTTACTATTCATTCTGATGGAAATATTGTGATCATAGATGGACCAATGATGTACCATGTGAACAACGTTTCAAATAATTTTAGTACCTATGCCACGCTCTTAGACTCGGGAAACTTAGTACTGCTCAACAACTCAAATAAAGCGGTTTTGTGGCAGAGTTTTGATTATCCAACCGATACCCTTTTACCAGGAATGAACCTAGGACATGATGCAGCCTTAGGTTACACTTGGTCGTTAAGATCATGGACAAGTGCTAATGATCCTGCTCCAGGAGCTTTTTCCCTGGAGTACGATTTTGGCAGGGCCAGTTTAATAGTCAATAAGGGTTCTAATGTGTTTTGGATTGATGACCATTCAAATGTAACTATTGAGAGTGTTATTAACCGAATTGGTGCGGTAATGAACAATTTAGATTATTGGACTTGGCCTGCGGATAGTAACTCTAGGCTGGTACTAGAAGTTTCTGGTGAGCTTAATGAGGAGTTTTGGTCAGAGGAAGCAAAGCGTTGGGTTTCTTTACAATCATCAAAGTGTGGAACGAACAATTCATGTGGAGTTTTTTCCATTTGTAACCCGCAAGCTCTTCACCCTTGTGACTGTCTCCATGGTTTCAAGCCGTTTGATATTGATTCGTGGAGGAAGGGGAACAAATCTGCTGGCTGCGTTAGGAAAACGGACTTGTCTTGCAGAAATAGCAGCAGTAATGATGGATTCCTCCAGTTCAATGAAGTGGAATTACCACCAACTTTGGACGGATATAGTGAGAAAACAAAGACCAATATGGCGAAAGAGTGTGAAAGTAATTGCTCCAGAAATTGTTCTTGTGTTGCTTATGCTTATGATTTAAACGGTAATTGCCAATTGTGGCTAGGTGAGGTATTGAGTCTAAAGAACATCTCAACATATGAGGATAAATTTTATAATACTAATCCAAGCTTTTATCTCAGACTTGCTGCCTCTGAATTGATTCTCACTGAGTCAAACACAACAAATGGTAAAGAACCAATGAATGATTTTCACAAGCATGAAAACAGGAGGAGGGATCTACTTCTAATTGTTATACTAATCTCATTTCTAACGTTTCTTATATTGGGCCTATTTGTTTACTGGACTAGAAGGCAAAGGAGAAAAGGAGAAGATTTGCTACATTTTGATGTAGGCATGAGCATGAAAATCACAGACTCTGAGCTTAGTGAAACAGACAAGGGTGTGAAAGTTAAAAAGAAGGAAGTTAAATTGCCATTATTCAGTTTTGTGAGTGTTTCAGCAGCAACTGATAACTTTTCAGATGCAAATAAACTTGGTGAGGGTGGCTTTGGACCCGTTTACAAGGGTAAATTATTGAATGGAGATGAAGTTGCTGTGAAAAGGCTATCCCGAAGATCTGGTCAAGGGTGGGAAGAGTTGAGAAATGAAGCCTTATTAATTGCAAAACTGCAACACAACAATCTTGTTAGACTTCTAGGCTGCTGCATTGATCGAGATGAAAAGATGCTGATTTATGAATTTATGCCTAACAAAAGCTTAGATTTTTTTCTTTTTGATGCAACAAAAAGGAGGATGCTAGATTGGGGAACACGAGTTAGGATTATTGATGGGATTGCTCAAGGACTCATTTATCTTCATCAATATTCCAGGTTCCGCATCATTCACCGGGATCTAAAAGCTAGCAACATATTGTTAGACATCAACATGAATCCTAAAATATCAGATTTTGGAATGGCAAGAATATTTGGTGAGAATGAACTTGAAGCAAATACTAACCGGATAGTTGGAACTTATGGCTACATGTCGCCTGAATATGCCATGGAAGGCCTTTTCTCAATAAAATCAGATGTATTTAGCTTTGGAGTCCTGTTGTTGGAGATTGTACATGGCAAAAAGAATACTGGTCTTTATCAAACAAATTCCTTCAATCTTCTTGGATATGCTTGGGATCATTGGAGAAGCAATCAGGGAATTGAGCTAATGGATTCAACACTGGAAGATACCTCTAGTACGCATGTGGTACCAAGATATGTGAACATAGGACTTCTTTGTGTTCAAGAAAGTCCAGCAGATAGGCCAACAATGGCTGATGTTGTATCAATGATTGGGAATGAATTTGTGGCCCTTCCTTGTCCTAAACCACCTGCATTTCTAAATCTGAGAGGTGATGAAAATTCAAGATTTTCCAGAAACATGCCAGAAAACTTTTCTGTAAATGGTATCACAGATTCTCTTGTGGAAGCAAGATGA 2529 0.3911 MASTFSSATFTSISTLFCFCMFCINATTNKEFILMGQSLGTSDTIVSYGGNFELGFFSRIRDSTTKYYIGIWFKKVPHDKVVWVANRDYAVQTSSAVLTIHSDGNIVIIDGPMMYHVNNVSNNFSTYATLLDSGNLVLLNNSNKAVLWQSFDYPTDTLLPGMNLGHDAALGYTWSLRSWTSANDPAPGAFSLEYDFGRASLIVNKGSNVFWIDDHSNVTIESVINRIGAVMNNLDYWTWPADSNSRLVLEVSGELNEEFWSEEAKRWVSLQSSKCGTNNSCGVFSICNPQALHPCDCLHGFKPFDIDSWRKGNKSAGCVRKTDLSCRNSSSNDGFLQFNEVELPPTLDGYSEKTKTNMAKECESNCSRNCSCVAYAYDLNGNCQLWLGEVLSLKNISTYEDKFYNTNPSFYLRLAASELILTESNTTNGKEPMNDFHKHENRRRDLLLIVILISFLTFLILGLFVYWTRRQRRKGEDLLHFDVGMSMKITDSELSETDKGVKVKKKEVKLPLFSFVSVSAATDNFSDANKLGEGGFGPVYKGKLLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRDEKMLIYEFMPNKSLDFFLFDATKRRMLDWGTRVRIIDGIAQGLIYLHQYSRFRIIHRDLKASNILLDINMNPKISDFGMARIFGENELEANTNRIVGTYGYMSPEYAMEGLFSIKSDVFSFGVLLLEIVHGKKNTGLYQTNSFNLLGYAWDHWRSNQGIELMDSTLEDTSSTHVVPRYVNIGLLCVQESPADRPTMADVVSMIGNEFVALPCPKPPAFLNLRGDENSRFSRNMPENFSVNGITDSLVEAR* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0057 842 CDD STKc_IRAK 531 795 - -
Apr5g0057 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 26 840 - -
Apr5g0057 842 Gene3D Phosphorylase Kinase; domain 1 499 600 - -
Apr5g0057 842 Gene3D Transferase(Phosphotransferase) domain 1 601 800 - -
Apr5g0057 842 ProSiteProfiles PAN/Apple domain profile. 326 415 IPR003609 -
Apr5g0057 842 SMART serkin_6 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0057 842 CDD PAN_AP_plant 322 415 - -
Apr5g0057 842 Pfam Protein tyrosine and serine/threonine kinase 529 794 IPR001245 GO:0004672|GO:0006468
Apr5g0057 842 Gene3D - 25 151 IPR036426 -
Apr5g0057 842 PIRSF SRK 1 842 IPR024171 GO:0004674
Apr5g0057 842 SMART blect_4 36 154 IPR001480 -
Apr5g0057 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Apr5g0057 842 ProSiteProfiles Protein kinase domain profile. 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0057 842 CDD B_lectin 37 154 IPR001480 -
Apr5g0057 842 SMART ntp_6 330 406 IPR003609 -
Apr5g0057 842 SUPERFAMILY Protein kinase-like (PK-like) 509 813 IPR011009 -
Apr5g0057 842 Pfam PAN-like domain 326 392 IPR003609 -
Apr5g0057 842 Pfam D-mannose binding lectin 81 179 IPR001480 -
Apr5g0057 842 Pfam Domain of unknown function (DUF3403) 798 842 IPR021820 GO:0004674
Apr5g0057 842 Pfam S-locus glycoprotein domain 239 303 IPR000858 GO:0048544
Apr5g0057 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 840 - -
Apr5g0057 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 185 IPR036426 -
Apr5g0057 842 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0057 Apr-Chr5 551304 555161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0057 447 811 Receptor kinase-like Gene Family AT4G23190 51.482 6.99e-125 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0057 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0057 - - gmx:100811148 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0057 5 551304 555161 Apr5g0057 5 551304 555161 ECH