Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0055 ATGGTTGATAGCATCATAGTGTTGTTTTGTTTGTTCTTTTTACTCTCCTACGTAAGACCCTGCACTTCACTATACAGTTTAGCTGCGAATGAATCTATTCAAGATGGTGAGAGTTTAGTTTCATCAGATGGAACATTTGAGGTGGGTTTCTTCAGCCCGGGGAATTCAACAGGTAGATATTTGGGTGTGTGGTATAGAAATCTGTCTCCTTTAACGGTTGTGTGGGTGGCGAACCGGGGAATTCCTCTACAGAATAAATTAGGAGTCTTGAAGCTGAATGAAAAGGGTGTTATTGTGATTCTTAATGGAGCAAACATCACTGTTTGGTCATCCAATATATCAAACAAAACAGTGAATAATCCAATTGTGAAGCTCTTGGACTCGGGCAATCTTGTGTTAAAAAATGAAGATACTAAGGAGGACAAATTTCTGTGGCAAAGTTTTGATTATCCATGTGATACTTTATTGCCAGGAATGAAGCTTGGATGGAACAAAGTAACTGGTCTAGAGAGGTTTGTGACATCTTGGAAAAGTGCAGATGATCCAGCTATTGGAGAGTATTCAACACATATTGACATTAGAGGATTCCCACAACTAGTTTTTATGAAGGGATCTGCGATAAAATTTAGAGGGGGCGCATGGAATGGCCTTGGTTACACTGGATATCCAACTCAACAATTGAAGAAAAAACAAACATATAAATTTGTATTTAATAAAACGGAAGTGTATTATCAGTATGAAGTCATTGATAGATCAATTGTCTCCATATATACATTGAACCCTTCAGGCCTTTTGCAGGGTTTGGCTTGGACAAGTCAAACAAGTGGTAGGAAAGTTATTGTTCCAGGAGGGGTAGACTCGTGCGATAATTATGCTTATTGTGGTGTAAATTCTATATGCAATATGGATGGTAATGCTCCAAAATGTGAATGCTTGAAAGGGTATGTTCCCAAGTTCCCTGCACAGTGGAATATTTCATATTGGTCTAGTGGTTGTGTTCCAAGGAATGAATCTATATGCAAAATCATTAACACAGATAGCTTCTGGAAGTACACAAATATGAAATTGCCAGACACATCTTCTTCATGGTATGATAAGACCAGGACCCTTGAGGAATGTCAGAAGTCATGTCTGAAAAAATGTTCATGTATAGCATATACAAATTTGGATATCCGTAGAGGAAGTGGCTGTCTGCTTTGGTTTGGCGATCTGGTTGACATGAGGAAGTTCTCTCAGTGGGGACAAGACCTTTATATCAGAGCCCCAGCTTCAGAACTAGATCATGTTGCAGTTAATGGCCACAGAAATAAGAAACAGGTGATAGTAGGAATCACAGTTGGAGCGATTATTTTTGGATTCATTACCTGTGTCTCCATAGTAATATTTAAAAAACGAGTGGCAGCAAGAGTACATTGTCATGTTGCACAATTTCAACGGCAGCAAGAATATTTTAGATTGAGGAAGGAAGACATTGATCTGCCAACATTTGATTTGTCAATCATTACCAAAGCTACTAATAGTTTTTCTAACAGAAATAAACTAGGGGAAGGTGGATTTGGACCAGTGTATAAGGGAACATTGATAGATGGGAAAGAGATAGCCATAAAACGGCACTCAAAGATGTCTGATCAAGGATTGGAGGAGTTTAAAAATGAAGTTTTGTTGGTTGCAAAACTTCAGCACCGTAATCTTGTGAAACTTCTAGGTTGCTGCATTCAAGGAGAGGAAAAACTGCTGATCTATGAATACATGCCCAACAAGAGCTTAGACTATTTCATCTTTGATGCAGCTAGAAGCAAGCTCTTGGCCTGGCATCAACGTTTTCACATTATTTGTGGCATTGCTCGAGGGCTTCTCTATCTTCACCAAGACTCTAGACTGAGAATTATTCATAGAGATTTGAAAACCAGCAATATTCTACTAGATGCCCATATGAATCCAAAAATCTCAGACTTTGGCATGGCTCGGACTTTTGGGGGTGATCAAATAGAAGACAAAACCAAAAAAGTAGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTGTGCATGGTCAATACTCCGTGAAATCAGATGTCTTTGGTTTTGGTGTGATAGTACTAGAGATAGTTAGTGGCAACAAGAACAGGGGATTTTCTGATCCAGACTCTCTTAATCTACTTGGGCATGCATGGAGACTTTGGACTGAAGATAGACCAATGGAACTCATAGATACACACTTGCGTGAAAGATGCATTCCTTCTGAAGTCTTAAGATGCATACATGTTGGTTTGTTGTGTGTACAACAAAAACCAGATGACAGGCCAGACATGTCAACTGTCATTCCTATGGTGAATGGTGAGAAATTAATGCCCCAGCCCAAGGCTCCTGGATTTTATACAGGAAGGAGTTTACCTGAATCAATATCGTCATCACAAACATGCAATCTTTTGTCCCGAAATGAGATGTCCCTGACAATATTTGAGATATGTTTAACTGATAGTTTCTTGAGCCCTTATATCTGGAAAGTGGACTCTTTAGCGGTGAATCAATCGATCCGAGATGGTGAAACTTTGGTTTCAGCTGGTGGTATTATTGAAGCTGGTTTCTTCAGTCCTGGAAGTTCAAAAAAACGGTACTTGGGTATATGGTACAAGGATGTGTCCCCTTTAACAGTGGTGTGGGTGGCTAACCGAGAAACCCCTCTTGAGGATAATTCAGGAGTTTTAAAACTCAAGGAAAAAGGGATTCTTGTGCTTATGAATGGTACAAACAGCAATATTTGGTCATCCAAAATATCAAGCAAAGCAGGGAATCATGCAAATGCTCAGCTCTTGGATTCAGGAAATTTTATAGTGAAGAACGGACAGAATAATTTCTTGTGGCAGAAAAAATATTTATCATCTTGGAAAAGTACTGATGATCCTGCTGAGGGTGAATTTTCATATCATTTAGATGGTCATGGTTTTCCTCAACTTGTTATCACAAAAGGGTCAACATTGATATACAGATTAGGCTCATGGAATGGTTTTTTCTTCAGCGGGATTCCTTGGGAAACACTCTACAGTTACTTTAATTTTTCTTTCGTGTTAACTGAGGAGGAAGTTCAATTCAAGTATGAGCCCTTGAATGATTCAGATGTTTCAAGATACCTGATCACTCCAACGGGTAGTGTGCAACGTTTTGTGTGGTCATATCAGACAGAAACTTGGCAACTTTTCCTGGCTGGCCCTGTGGATCAGTGTGAAAACTATGCCTTGTGTGGTGCTAATTCTGATTGCAATGTTAGTAACTCTCCACAATGTGAGTGCCTCCCAGGTTTCACACCCAAATCTCCAGAAAAATGGAATTTGTTAAATTGGAGTGATGGATGTGTTCGGAAGGTGAACTTGGATTGTGATAATAGAGATGGATTTCGTAAACTTACAGGAATGAAGTTACCAGACACATCTTCCTCGTGGTTTGATAAGAACATGAATCTTCAGGAATGTGAGAATCAGTGCTTGAAAAACTGCAGTTGCATAGCATATGCAGCTTTAGATATCAGAGATGGTGGAAGTGGCTGCATGATTTGGTTTGATAAAATAATAGACATGAGGCAAGAAAGTTCTGTTGGACAAGAGATTTACATAAAAATGGCTGCTTCTGAATTAGGTCACTCATCAAATAACACAAACAAGAAAAAGTTAGCTGGGATTCTGGTAGGAATTGGGATACTTGTGTTGGTCATCGCAGTAGTTGGATATGCCATCTATCGCAGAAGAAAGAAACTTAAGAAGTCAGGTAAGCAAGAAATAATTAGCATGGAGGATCATAGTGAGAAATATGGGAATGAAAGCATGGACTTGACTACATTTGATTTTTCAACTATAGCTAATGCCACAGATCACTTCTCCCTCAGTAACTTACTGGGAGAAGGTGGATATGGACCAGTTTACAAGGGTACACTAGCCAATGGGAAAGAAATTGCTGTCAAGCGTCTTTCCTTGAAATCTGTACAAGGACCACAGGAATTCAAAAATGAAATCCTGTTGATTGCCAATCTTCAGCATCGAAATCTTGTGAAACTACTAGGTTGTTGCATTCAGAATGATGAGAGAATCCTAATATATGAATACATGCCTAACAGAAGTTTGGACAAGTTTATTTTTGATAAAACTAGAAGCAAAGTGTTGGACTGGAATAAACGTTTATATATTATAAGTGGGATTGCTAGAGGACTTGTTTATCTTCATCAAGATTCGAGACTGAGGATCATCCACAGAGATTTAAAAACCAGCAACATTCTTCTTGACAATGATATGAACCCAAAAATATCAGACTTTGGATTGGCTAGGGCCTTCGGTGGTGATCATGCTGCGGCCAATACAATAAGAGTAGTGGGAACCCATGGTTACATGCCCCCTGAGTATGCAGTGTATGGATCCTTTTCAGTGAAGTCTGATGTCTTTAGCTTCGGTGTTATAGTATTGGAGATGGTTAGTGGGATGAAGAATAGAGAATTTTCTGATCCACAACACAATCTTAATCTTCTTGGACATGCATGGAGACTGTGGAGTGAGGATAAACCATTGGAGCTGATAAATGACTCCCTTAGTGATTCTGTTATTGAAGATGAGGCATTAAGATGCATTCACATAGGACTCTTGTGTGTGCAAGAGAGACCAGATGATAGGCCAGACATGTCATCTGTTGTTCTAATGTTGAATGGTGAGAGAGCATTGCCTAATCCACGACAACCCGGGTTTTATCCACATGAAGTTTCATCAAGCAAACAAGAACTATCTTCGACCAATGAAATTTCCATTTCATTGTTACAGCCAAGATAG 4809 0.3926 MVDSIIVLFCLFFLLSYVRPCTSLYSLAANESIQDGESLVSSDGTFEVGFFSPGNSTGRYLGVWYRNLSPLTVVWVANRGIPLQNKLGVLKLNEKGVIVILNGANITVWSSNISNKTVNNPIVKLLDSGNLVLKNEDTKEDKFLWQSFDYPCDTLLPGMKLGWNKVTGLERFVTSWKSADDPAIGEYSTHIDIRGFPQLVFMKGSAIKFRGGAWNGLGYTGYPTQQLKKKQTYKFVFNKTEVYYQYEVIDRSIVSIYTLNPSGLLQGLAWTSQTSGRKVIVPGGVDSCDNYAYCGVNSICNMDGNAPKCECLKGYVPKFPAQWNISYWSSGCVPRNESICKIINTDSFWKYTNMKLPDTSSSWYDKTRTLEECQKSCLKKCSCIAYTNLDIRRGSGCLLWFGDLVDMRKFSQWGQDLYIRAPASELDHVAVNGHRNKKQVIVGITVGAIIFGFITCVSIVIFKKRVAARVHCHVAQFQRQQEYFRLRKEDIDLPTFDLSIITKATNSFSNRNKLGEGGFGPVYKGTLIDGKEIAIKRHSKMSDQGLEEFKNEVLLVAKLQHRNLVKLLGCCIQGEEKLLIYEYMPNKSLDYFIFDAARSKLLAWHQRFHIICGIARGLLYLHQDSRLRIIHRDLKTSNILLDAHMNPKISDFGMARTFGGDQIEDKTKKVVGTYGYMPPEYAVHGQYSVKSDVFGFGVIVLEIVSGNKNRGFSDPDSLNLLGHAWRLWTEDRPMELIDTHLRERCIPSEVLRCIHVGLLCVQQKPDDRPDMSTVIPMVNGEKLMPQPKAPGFYTGRSLPESISSSQTCNLLSRNEMSLTIFEICLTDSFLSPYIWKVDSLAVNQSIRDGETLVSAGGIIEAGFFSPGSSKKRYLGIWYKDVSPLTVVWVANRETPLEDNSGVLKLKEKGILVLMNGTNSNIWSSKISSKAGNHANAQLLDSGNFIVKNGQNNFLWQKKYLSSWKSTDDPAEGEFSYHLDGHGFPQLVITKGSTLIYRLGSWNGFFFSGIPWETLYSYFNFSFVLTEEEVQFKYEPLNDSDVSRYLITPTGSVQRFVWSYQTETWQLFLAGPVDQCENYALCGANSDCNVSNSPQCECLPGFTPKSPEKWNLLNWSDGCVRKVNLDCDNRDGFRKLTGMKLPDTSSSWFDKNMNLQECENQCLKNCSCIAYAALDIRDGGSGCMIWFDKIIDMRQESSVGQEIYIKMAASELGHSSNNTNKKKLAGILVGIGILVLVIAVVGYAIYRRRKKLKKSGKQEIISMEDHSEKYGNESMDLTTFDFSTIANATDHFSLSNLLGEGGYGPVYKGTLANGKEIAVKRLSLKSVQGPQEFKNEILLIANLQHRNLVKLLGCCIQNDERILIYEYMPNRSLDKFIFDKTRSKVLDWNKRLYIISGIARGLVYLHQDSRLRIIHRDLKTSNILLDNDMNPKISDFGLARAFGGDHAAANTIRVVGTHGYMPPEYAVYGSFSVKSDVFSFGVIVLEMVSGMKNREFSDPQHNLNLLGHAWRLWSEDKPLELINDSLSDSVIEDEALRCIHIGLLCVQERPDDRPDMSSVVLMLNGERALPNPRQPGFYPHEVSSSKQELSSTNEISISLLQPR* 1603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0055 1602 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 822 - -
Apr5g0055 1602 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 831 956 - -
Apr5g0055 1602 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 958 1599 - -
Apr5g0055 1602 SMART serkin_6 1291 1560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0055 1602 SMART serkin_6 508 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0055 1602 ProSiteProfiles EGF-like domain profile. 1071 1107 IPR000742 -
Apr5g0055 1602 SMART blect_4 843 969 IPR001480 -
Apr5g0055 1602 SMART blect_4 30 151 IPR001480 -
Apr5g0055 1602 SUPERFAMILY Protein kinase-like (PK-like) 1273 1586 IPR011009 -
Apr5g0055 1602 Pfam Protein kinase domain 1293 1493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0055 1602 ProSiteProfiles PAN/Apple domain profile. 1126 1207 IPR003609 -
Apr5g0055 1602 Gene3D - 835 959 IPR036426 -
Apr5g0055 1602 Gene3D - 22 148 IPR036426 -
Apr5g0055 1602 MobiDBLite consensus disorder prediction 1577 1602 - -
Apr5g0055 1602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1412 1424 IPR008271 GO:0004672|GO:0006468
Apr5g0055 1602 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
Apr5g0055 1602 Gene3D Hepatocyte Growth Factor 1123 1203 - -
Apr5g0055 1602 Gene3D Hepatocyte Growth Factor 340 418 - -
Apr5g0055 1602 Gene3D Transferase(Phosphotransferase) domain 1 1367 1570 - -
Apr5g0055 1602 Gene3D Transferase(Phosphotransferase) domain 1 584 786 - -
Apr5g0055 1602 CDD B_lectin 843 956 IPR001480 -
Apr5g0055 1602 CDD PAN_AP_plant 344 420 - -
Apr5g0055 1602 Pfam S-locus glycoprotein domain 996 1105 IPR000858 GO:0048544
Apr5g0055 1602 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Apr5g0055 1602 Gene3D Phosphorylase Kinase; domain 1 468 583 - -
Apr5g0055 1602 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Apr5g0055 1602 Pfam Protein tyrosine and serine/threonine kinase 511 775 IPR001245 GO:0004672|GO:0006468
Apr5g0055 1602 ProSiteProfiles Protein kinase domain profile. 508 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0055 1602 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Apr5g0055 1602 MobiDBLite consensus disorder prediction 1570 1602 - -
Apr5g0055 1602 CDD STKc_IRAK 1297 1564 - -
Apr5g0055 1602 Gene3D Phosphorylase Kinase; domain 1 1264 1366 - -
Apr5g0055 1602 CDD STKc_IRAK 514 780 - -
Apr5g0055 1602 ProSiteProfiles Bulb-type lectin domain profile. 837 959 IPR001480 -
Apr5g0055 1602 SUPERFAMILY Protein kinase-like (PK-like) 492 793 IPR011009 -
Apr5g0055 1602 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 958 1599 - -
Apr5g0055 1602 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 822 - -
Apr5g0055 1602 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 831 956 - -
Apr5g0055 1602 CDD B_lectin 30 151 IPR001480 -
Apr5g0055 1602 SUPERFAMILY alpha-D-mannose-specific plant lectins 885 1003 IPR036426 -
Apr5g0055 1602 Pfam D-mannose binding lectin 72 177 IPR001480 -
Apr5g0055 1602 Pfam D-mannose binding lectin 885 956 IPR001480 -
Apr5g0055 1602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Apr5g0055 1602 ProSiteProfiles Protein kinase domain profile. 1291 1576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0055 1602 SMART ntp_6 1127 1206 IPR003609 -
Apr5g0055 1602 SMART ntp_6 343 421 IPR003609 -
Apr5g0055 1602 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Apr5g0055 1602 CDD PAN_AP_plant 1122 1207 - -
Apr5g0055 1602 Pfam PAN-like domain 344 407 IPR003609 -
Apr5g0055 1602 Pfam PAN-like domain 1126 1192 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0055 Apr-Chr5 488207 507247 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0055 496 807 Receptor kinase-like Gene Family AT4G23140 58.255 8.96e-120 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0055 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0055 - - aprc:113865090 2100.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0055 5 488207 507247 Apr5g0055 5 488207 507247 ECH