Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr5g0047 | ATGCTAATTTTTTCCAAGTTACTATTTTTCTTCTCTCAAATTTCCTATGCTACTGACACGATTTCCCAATCTCAATCCCTTCTTGATGGAAACACCTTGGTTTCTAAAGATGAAACCTTTGAGTTGGGTTTCTTCAGTCCTGGTAGTTCCTCAAACCGCTACATAGGAATATGGTTCAAAAACATTCCAGTTACAACAATAGTTTGGGTTGCCAACCGTGACAACCCAATCAAAGACAACTCAAGCAAGTTGATCATAAACCAAGAGGGAAACCTCGTACTTCTCAGCCAGAACCAGACCCTTCTTTGGTCAACAAACACAACAACAAAAGCATCAAGTCCCATTGTGCAACTCTTAAACACTGGAAATTTAGTACTCATGGATGAGAACAACAACAACAATAACAACCCAGGTTTTTTGTGGCAAAGTTTTGACCATCCTTGTGATACATTATTACCAGGAATGAAGATAGGATGGAACCTAAAAACTGGTCTTAATAGACGTCTCACTGCATGGAAAGATTGGGATGATCCTTCTTCAGGAGATTTTACTTCAGGTATAGTACTTAGCAGCAACCCTGAAATGGTTATATGGAAGGGTTCTGAGGAGTTCTATAGGAGTGGACCCTGGAATGGAAATACGTCTAGTGGAATATTGGGATTGATGGCTAATCCACTTTATAATTACGAATTTGTCAACAATGAAGATGAGGTATATTACATGTTTACTCTTAAGAATAGTTCTGTGATTTCTATTATTGTTTTGAACCAAACACTTTCACTTCGCCAACGCCTCACATGGATTCCTCAAACCAAAACTTGGACCGTTTACCAATCCTTGCCAGAAGATGGTTGTGATGTTTATAATGTTTGTGGTGCATATGGAAAATGTGTCATTAATGCGTCACCAATTTGCCAATGTTTAGAAGGGTTCAAACCAAAATCACCTCAACATTGGAATGCCATGGATTGGACACAAGGGTGTGTGCCTAATGAACAGTGGAGTTGTGGGGTTGAAAACAAAGATGGGTTTAGTAGATTTTCTGGGATGAAAGTGCCAGATACTACGCATTCTTGGACCCATGAAAACATGACACTTGAGGATTGCAAGGTACAGTGCTTGAAAAATTGTTCTTGCACTGCTTACTCAAACGTTTATCCAGGAGAAGATAGTGGTTGCTTGATTTGGTTTGGTGATCTTCTTGATTTGAGAGTTTCAGAAAGTGGGCAAGATCTATATGTTCGAGTTGCAACGTCAGATGTGGATGCTAAACATGGACACAGAAAAAAGGTCGTCTTGGCTGTCACAATCACAGCTTCGTTGATCCTTGTGATGCTATTGGCATTCTGTTACATTTATATGACCAAAACAAAAAACAAAGATGAAACCGAGAATATTATATTAACAAAAGGGAAAGATGATAGCACACAAGATTTGGATCTTCCATTCTTTGATCTTGCCACAATAGTTGATGCCACTGATAACTTCTCGATCAAGAATAAGCTAGGCGAGGGTGGTTTTGGACCAGTATACAAGGGTATATTGCAAGATGGACAACAAATTGCAGTCAAAAGGCTTTCAAGGAGTTCTGGGCAAGGAATAAAAGAATTTAAGAATGAAGTTATATTGTGTGCCCAACTTCAACACCGCAATCTTGTTAAAGTTCTTGGTTTTTGCGTTGAAGGAGAAGAGAAAATGTTAGTCTATGAATACATGCCTAACAAAAGTCTTGATTCATTTATTGTCGATTCAACTCAAAGCAAACTTTTAGATTGGCCTATGCGCTTTCACATATTGAATTCAATTGCTCGAGGACTTCTGTATCTTCATCAAGATTCTAGATTAAGAATCATACATAGAGATTTGAAAGCCAGTAATATTTTGTTAGACAACGATATGAACCCAAAGATTTCAGATTTTGGCTTAGCTAGAATGTGTGGAGCAGATCAAATTGAAGGGAGTACAAGTAGAATTGTTGGAACATATGGTTATATGGCACCAGAATACGCCATTGACGGATTATTCTCTATAAAATCTGATGTATTTAGCTTTGGTATATTATTGCTTGAAATTGTAAGTGGAAAGAAAAATAGAGCACTTACCTTGCACGAGCACGATAATAATCTTATTGGACAGGCATGGAGACTGTGGAAACAGGAAATTCCTGAAAAATTGATTGATGCATCTTTGACAGGCTCGTGTAATATATCTGAAGCTATTAGATGCATTCATGTTGGTCTTTTATGTTTGCAACATCATCCTGATGATAGGCCAAACATGACATCTGTGGTTGTAATGTTAAGCAGTGAAAATGCTTTACCTCAACCAAATGAACCTGGTTTCTTGATTAAGAAGGTCGTAGTTGAAGGGGAACAATCTTTTGGACAACTATCATCATCAGTTAATGAAGTAACTATTTCACTAATGAATGCTCGATAG | 2439 | 0.378 | MLIFSKLLFFFSQISYATDTISQSQSLLDGNTLVSKDETFELGFFSPGSSSNRYIGIWFKNIPVTTIVWVANRDNPIKDNSSKLIINQEGNLVLLSQNQTLLWSTNTTTKASSPIVQLLNTGNLVLMDENNNNNNNPGFLWQSFDHPCDTLLPGMKIGWNLKTGLNRRLTAWKDWDDPSSGDFTSGIVLSSNPEMVIWKGSEEFYRSGPWNGNTSSGILGLMANPLYNYEFVNNEDEVYYMFTLKNSSVISIIVLNQTLSLRQRLTWIPQTKTWTVYQSLPEDGCDVYNVCGAYGKCVINASPICQCLEGFKPKSPQHWNAMDWTQGCVPNEQWSCGVENKDGFSRFSGMKVPDTTHSWTHENMTLEDCKVQCLKNCSCTAYSNVYPGEDSGCLIWFGDLLDLRVSESGQDLYVRVATSDVDAKHGHRKKVVLAVTITASLILVMLLAFCYIYMTKTKNKDETENIILTKGKDDSTQDLDLPFFDLATIVDATDNFSIKNKLGEGGFGPVYKGILQDGQQIAVKRLSRSSGQGIKEFKNEVILCAQLQHRNLVKVLGFCVEGEEKMLVYEYMPNKSLDSFIVDSTQSKLLDWPMRFHILNSIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARMCGADQIEGSTSRIVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNRALTLHEHDNNLIGQAWRLWKQEIPEKLIDASLTGSCNISEAIRCIHVGLLCLQHHPDDRPNMTSVVVMLSSENALPQPNEPGFLIKKVVVEGEQSFGQLSSSVNEVTISLMNAR* | 813 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr5g0047 | 812 | Pfam | Protein tyrosine and serine/threonine kinase | 497 | 765 | IPR001245 | GO:0004672|GO:0006468 | |
Apr5g0047 | 812 | Gene3D | Transferase(Phosphotransferase) domain 1 | 572 | 777 | - | - | |
Apr5g0047 | 812 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 617 | 629 | IPR008271 | GO:0004672|GO:0006468 | |
Apr5g0047 | 812 | SMART | serkin_6 | 496 | 767 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g0047 | 812 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 26 | 806 | - | - | |
Apr5g0047 | 812 | SMART | ntp_6 | 339 | 416 | IPR003609 | - | |
Apr5g0047 | 812 | CDD | PAN_AP_plant | 335 | 417 | - | - | |
Apr5g0047 | 812 | Pfam | Domain of unknown function (DUF3403) | 768 | 812 | IPR021820 | GO:0004674 | |
Apr5g0047 | 812 | ProSiteProfiles | PAN/Apple domain profile. | 336 | 417 | IPR003609 | - | |
Apr5g0047 | 812 | SMART | blect_4 | 24 | 147 | IPR001480 | - | |
Apr5g0047 | 812 | Pfam | D-mannose binding lectin | 66 | 173 | IPR001480 | - | |
Apr5g0047 | 812 | Pfam | S-locus glycoprotein domain | 205 | 315 | IPR000858 | GO:0048544 | |
Apr5g0047 | 812 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 67 | 178 | IPR036426 | - | |
Apr5g0047 | 812 | Gene3D | Phosphorylase Kinase; domain 1 | 454 | 571 | - | - | |
Apr5g0047 | 812 | Pfam | PAN-like domain | 336 | 403 | IPR003609 | - | |
Apr5g0047 | 812 | CDD | B_lectin | 24 | 147 | IPR001480 | - | |
Apr5g0047 | 812 | SUPERFAMILY | Protein kinase-like (PK-like) | 481 | 782 | IPR011009 | - | |
Apr5g0047 | 812 | PIRSF | SRK | 1 | 812 | IPR024171 | GO:0004674 | |
Apr5g0047 | 812 | ProSiteProfiles | Bulb-type lectin domain profile. | 18 | 139 | IPR001480 | - | |
Apr5g0047 | 812 | ProSiteProfiles | EGF-like domain profile. | 281 | 317 | IPR000742 | - | |
Apr5g0047 | 812 | CDD | STKc_IRAK | 502 | 767 | - | - | |
Apr5g0047 | 812 | ProSiteProfiles | Protein kinase domain profile. | 496 | 773 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g0047 | 812 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 26 | 806 | - | - | |
Apr5g0047 | 812 | Gene3D | - | 12 | 144 | IPR036426 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr5g0047 | Apr-Chr5 | 448038 | 451947 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr5g0047 | 416 | 784 | Receptor kinase-like Gene Family | AT4G23230 | 51.351 | 1.13e-124 | 386 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Apr5g0047 | PK_Tyr_Ser-Thr | 1.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr5g0047 | - | - | gmx:100790436 | 1255.74 |