Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0047 ATGCTAATTTTTTCCAAGTTACTATTTTTCTTCTCTCAAATTTCCTATGCTACTGACACGATTTCCCAATCTCAATCCCTTCTTGATGGAAACACCTTGGTTTCTAAAGATGAAACCTTTGAGTTGGGTTTCTTCAGTCCTGGTAGTTCCTCAAACCGCTACATAGGAATATGGTTCAAAAACATTCCAGTTACAACAATAGTTTGGGTTGCCAACCGTGACAACCCAATCAAAGACAACTCAAGCAAGTTGATCATAAACCAAGAGGGAAACCTCGTACTTCTCAGCCAGAACCAGACCCTTCTTTGGTCAACAAACACAACAACAAAAGCATCAAGTCCCATTGTGCAACTCTTAAACACTGGAAATTTAGTACTCATGGATGAGAACAACAACAACAATAACAACCCAGGTTTTTTGTGGCAAAGTTTTGACCATCCTTGTGATACATTATTACCAGGAATGAAGATAGGATGGAACCTAAAAACTGGTCTTAATAGACGTCTCACTGCATGGAAAGATTGGGATGATCCTTCTTCAGGAGATTTTACTTCAGGTATAGTACTTAGCAGCAACCCTGAAATGGTTATATGGAAGGGTTCTGAGGAGTTCTATAGGAGTGGACCCTGGAATGGAAATACGTCTAGTGGAATATTGGGATTGATGGCTAATCCACTTTATAATTACGAATTTGTCAACAATGAAGATGAGGTATATTACATGTTTACTCTTAAGAATAGTTCTGTGATTTCTATTATTGTTTTGAACCAAACACTTTCACTTCGCCAACGCCTCACATGGATTCCTCAAACCAAAACTTGGACCGTTTACCAATCCTTGCCAGAAGATGGTTGTGATGTTTATAATGTTTGTGGTGCATATGGAAAATGTGTCATTAATGCGTCACCAATTTGCCAATGTTTAGAAGGGTTCAAACCAAAATCACCTCAACATTGGAATGCCATGGATTGGACACAAGGGTGTGTGCCTAATGAACAGTGGAGTTGTGGGGTTGAAAACAAAGATGGGTTTAGTAGATTTTCTGGGATGAAAGTGCCAGATACTACGCATTCTTGGACCCATGAAAACATGACACTTGAGGATTGCAAGGTACAGTGCTTGAAAAATTGTTCTTGCACTGCTTACTCAAACGTTTATCCAGGAGAAGATAGTGGTTGCTTGATTTGGTTTGGTGATCTTCTTGATTTGAGAGTTTCAGAAAGTGGGCAAGATCTATATGTTCGAGTTGCAACGTCAGATGTGGATGCTAAACATGGACACAGAAAAAAGGTCGTCTTGGCTGTCACAATCACAGCTTCGTTGATCCTTGTGATGCTATTGGCATTCTGTTACATTTATATGACCAAAACAAAAAACAAAGATGAAACCGAGAATATTATATTAACAAAAGGGAAAGATGATAGCACACAAGATTTGGATCTTCCATTCTTTGATCTTGCCACAATAGTTGATGCCACTGATAACTTCTCGATCAAGAATAAGCTAGGCGAGGGTGGTTTTGGACCAGTATACAAGGGTATATTGCAAGATGGACAACAAATTGCAGTCAAAAGGCTTTCAAGGAGTTCTGGGCAAGGAATAAAAGAATTTAAGAATGAAGTTATATTGTGTGCCCAACTTCAACACCGCAATCTTGTTAAAGTTCTTGGTTTTTGCGTTGAAGGAGAAGAGAAAATGTTAGTCTATGAATACATGCCTAACAAAAGTCTTGATTCATTTATTGTCGATTCAACTCAAAGCAAACTTTTAGATTGGCCTATGCGCTTTCACATATTGAATTCAATTGCTCGAGGACTTCTGTATCTTCATCAAGATTCTAGATTAAGAATCATACATAGAGATTTGAAAGCCAGTAATATTTTGTTAGACAACGATATGAACCCAAAGATTTCAGATTTTGGCTTAGCTAGAATGTGTGGAGCAGATCAAATTGAAGGGAGTACAAGTAGAATTGTTGGAACATATGGTTATATGGCACCAGAATACGCCATTGACGGATTATTCTCTATAAAATCTGATGTATTTAGCTTTGGTATATTATTGCTTGAAATTGTAAGTGGAAAGAAAAATAGAGCACTTACCTTGCACGAGCACGATAATAATCTTATTGGACAGGCATGGAGACTGTGGAAACAGGAAATTCCTGAAAAATTGATTGATGCATCTTTGACAGGCTCGTGTAATATATCTGAAGCTATTAGATGCATTCATGTTGGTCTTTTATGTTTGCAACATCATCCTGATGATAGGCCAAACATGACATCTGTGGTTGTAATGTTAAGCAGTGAAAATGCTTTACCTCAACCAAATGAACCTGGTTTCTTGATTAAGAAGGTCGTAGTTGAAGGGGAACAATCTTTTGGACAACTATCATCATCAGTTAATGAAGTAACTATTTCACTAATGAATGCTCGATAG 2439 0.378 MLIFSKLLFFFSQISYATDTISQSQSLLDGNTLVSKDETFELGFFSPGSSSNRYIGIWFKNIPVTTIVWVANRDNPIKDNSSKLIINQEGNLVLLSQNQTLLWSTNTTTKASSPIVQLLNTGNLVLMDENNNNNNNPGFLWQSFDHPCDTLLPGMKIGWNLKTGLNRRLTAWKDWDDPSSGDFTSGIVLSSNPEMVIWKGSEEFYRSGPWNGNTSSGILGLMANPLYNYEFVNNEDEVYYMFTLKNSSVISIIVLNQTLSLRQRLTWIPQTKTWTVYQSLPEDGCDVYNVCGAYGKCVINASPICQCLEGFKPKSPQHWNAMDWTQGCVPNEQWSCGVENKDGFSRFSGMKVPDTTHSWTHENMTLEDCKVQCLKNCSCTAYSNVYPGEDSGCLIWFGDLLDLRVSESGQDLYVRVATSDVDAKHGHRKKVVLAVTITASLILVMLLAFCYIYMTKTKNKDETENIILTKGKDDSTQDLDLPFFDLATIVDATDNFSIKNKLGEGGFGPVYKGILQDGQQIAVKRLSRSSGQGIKEFKNEVILCAQLQHRNLVKVLGFCVEGEEKMLVYEYMPNKSLDSFIVDSTQSKLLDWPMRFHILNSIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARMCGADQIEGSTSRIVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNRALTLHEHDNNLIGQAWRLWKQEIPEKLIDASLTGSCNISEAIRCIHVGLLCLQHHPDDRPNMTSVVVMLSSENALPQPNEPGFLIKKVVVEGEQSFGQLSSSVNEVTISLMNAR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0047 812 Pfam Protein tyrosine and serine/threonine kinase 497 765 IPR001245 GO:0004672|GO:0006468
Apr5g0047 812 Gene3D Transferase(Phosphotransferase) domain 1 572 777 - -
Apr5g0047 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Apr5g0047 812 SMART serkin_6 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0047 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 806 - -
Apr5g0047 812 SMART ntp_6 339 416 IPR003609 -
Apr5g0047 812 CDD PAN_AP_plant 335 417 - -
Apr5g0047 812 Pfam Domain of unknown function (DUF3403) 768 812 IPR021820 GO:0004674
Apr5g0047 812 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Apr5g0047 812 SMART blect_4 24 147 IPR001480 -
Apr5g0047 812 Pfam D-mannose binding lectin 66 173 IPR001480 -
Apr5g0047 812 Pfam S-locus glycoprotein domain 205 315 IPR000858 GO:0048544
Apr5g0047 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 178 IPR036426 -
Apr5g0047 812 Gene3D Phosphorylase Kinase; domain 1 454 571 - -
Apr5g0047 812 Pfam PAN-like domain 336 403 IPR003609 -
Apr5g0047 812 CDD B_lectin 24 147 IPR001480 -
Apr5g0047 812 SUPERFAMILY Protein kinase-like (PK-like) 481 782 IPR011009 -
Apr5g0047 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Apr5g0047 812 ProSiteProfiles Bulb-type lectin domain profile. 18 139 IPR001480 -
Apr5g0047 812 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Apr5g0047 812 CDD STKc_IRAK 502 767 - -
Apr5g0047 812 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0047 812 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 26 806 - -
Apr5g0047 812 Gene3D - 12 144 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0047 Apr-Chr5 448038 451947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0047 416 784 Receptor kinase-like Gene Family AT4G23230 51.351 1.13e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0047 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0047 - - gmx:100790436 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0047 5 448038 451947 Apr5g0047 5 448038 451947 ECH