Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0046 ATGGCCATTCTTTCAAGTATCCTTGTTTTTTCCAAGTTACTATTTTTCTTCTCTCAAATTTCCTATGCTACTGACACGATTTCCCAATCTCAATCCCTTCTTGATGGCAAGACCTTGGTTTCTAAAGATGAAACCTTTGAGTTGGGTTTCTTCAGTCCTGGTAGTTCCTCAAACCGCTACATAGGAATATGGTTCAAAAACATTCCAGTTACAACAATAGTTTGGGTTGCCAACCGTGACAACCCAATCAAAGACAACTCAAGCAAGTTGATCATAAACCAAGAGGGAAACCTCGTACTTCTCAGCCAGAACCAGACCCTTCTTTGGTCAACAAACACAACAACAAAAGCATCAAGTCCCATTGTGCAACTCTTAAACACTGGAAATTTTGTACTCACGGATGAGAAGAGCAACAACAATAACAGCCCAAGTTTTTTGTGGCAAAGCTTTGACCATCCTTGTAATACATTATTACCAGGAATGAAGATGGGATGGAACCTAAAAACAGGTCTTAATAGACATCTCACTGCATGGAAAGATTGGGATGATCCATCTTCAGGAGATTTTACTGCAGGTATAGCACTTAGCAGCAAGACTGAAATAGTTACGTGGAAGGGTTCTAAGGAGTTCTATAGGACTGGACCGTGGAATGGAAATAGGTCCAGTGGAGTATTGGGAGTGATGGATAATCCAGTTTATGATTACGAATTTGTCGACAATGAAGATGAGGTATATTACATATTTACTCTGAAGAATAGTTCTGTGATTTCTATTATTGTTTTGAACCAAACACTTTTACTTCGCCAACGCCTCACATGGATTCCTCGAACCAAAACATGGGCCGTTTACCAATCCTTGCCAGAAGATGGTTGTGATGTTTATAATGTTTGTGGTGCATATGGAAATTGTGTCATTAATGCGTCACCAATTTGCCAATGTTTAGAAGGGTTCAAACCAAAATCACCTCAACATTGGAATGCCATGGATTGGACACAAGGGTGTGTGCCTAATGAACCGTATAGTTATGGGGTTGAAAACAAAGATGGGTTTAGTAGATTTTCTGGGATGAAAGTGCCAGATACTACACATTCTTGGACTCATGAAAACATGACACTTGAGGATTGCAAGTTACAGTGCTTGAAAAATTGTTCTTGCACTGCTTACTCAGACGTTTATCCAGGAGAAGATAGCGGTTGCTTGATTTGGTTTGGTGATCTTCTTGATTTGAGAGTTTTAGAAAGTGGGCAAGATCTATATGTTCGAATTGCAACATCAGATGCGGATGCTAAACATGGACACAGAAAAAAGGTTGGCTTGGCTGTCACAATCACAGTTTCGTTGATCCTTGTGATACTATTGGCATTCTATTACATTTATATGTCCAAAACAAAGAGCAAAGATGAAACCGAGAATATTATATTAACAGAAGGGAAAGATGATAGCACACAAGATTTGGATCTTCCATTCTTTGATCTTGCTACAATAGTTGATGCCACCGATAACTTCTCGATCAAGAATAAGCTAGGCGAGGGTGGTTTTGGACCAGTATACAAGGGTATATTGCAAGATGGACAACAAATTGCAGTCAAAAGGCTTTCAAGGAGTTCTGGGCAAGGAATAAAAGAATTTAAGAATGAAGTTATATTGTGTGCCCAACTTCAACACCGCAATCTTGTTAAAGTTCTTGGTTTTTGCGTTGAAGGAGAAGAGAAAATGTTAGTCTATGAATACATGCCTAACAAAAGTCTTGATTCATTTATTTACGATTCAAGTCAAAGCAAACTTTTAGATTGGCCTATGCGCTTTCACATATTGAATTCAATTGCTCGAGGGCTAATGTATCTTCATCAAGATTCTAGATTAAGGATCATACATAGAGATTTGAAAGCAAGTAATATTTTGCTAGACAATGATATGAATGCGAAGATTTCAGACTTTGGCTTAGCTAGAATGTGTGGAGCAGATCAAATTGAAGGAAATACAAGTAGAATTGTTGGGACATATGGCTATATGGCACCAGAATACGCCATTGACGGATTATTCTCCATAAAATCAGATGTATTTAGCTTTGGCATATTATTGCTTGAAATTGTAAGTGGAAAGAAAAATAGAGCACTTACCTTGCACGAGCACGATAATAATCTTATTGGACAGGCATGGAGACTGTGGAAACAGGAAATTCCTGAAAAATTGATTGATGCATATTTGACAGGCTCGTGTAATATATCTGAAGCTATTAGATGCATTCATGCTGGTCTTTTATGTTTGCAACATCATCCTGATGATAGGCCAAACATGACATCGGTGGTTGTAATGTTAAGCAGTGAAAATGCTTTACCTCAACCAAATGAACCAGGTTTCCTGATTAAGAAGGTCTCAGTTGAAGGGAAACAATCATTTGAAATACTATCATCATCGGTCAATGAAGTAACTATTTCACTAATGAATGCTCGATAG 2457 0.3814 MAILSSILVFSKLLFFFSQISYATDTISQSQSLLDGKTLVSKDETFELGFFSPGSSSNRYIGIWFKNIPVTTIVWVANRDNPIKDNSSKLIINQEGNLVLLSQNQTLLWSTNTTTKASSPIVQLLNTGNFVLTDEKSNNNNSPSFLWQSFDHPCNTLLPGMKMGWNLKTGLNRHLTAWKDWDDPSSGDFTAGIALSSKTEIVTWKGSKEFYRTGPWNGNRSSGVLGVMDNPVYDYEFVDNEDEVYYIFTLKNSSVISIIVLNQTLLLRQRLTWIPRTKTWAVYQSLPEDGCDVYNVCGAYGNCVINASPICQCLEGFKPKSPQHWNAMDWTQGCVPNEPYSYGVENKDGFSRFSGMKVPDTTHSWTHENMTLEDCKLQCLKNCSCTAYSDVYPGEDSGCLIWFGDLLDLRVLESGQDLYVRIATSDADAKHGHRKKVGLAVTITVSLILVILLAFYYIYMSKTKSKDETENIILTEGKDDSTQDLDLPFFDLATIVDATDNFSIKNKLGEGGFGPVYKGILQDGQQIAVKRLSRSSGQGIKEFKNEVILCAQLQHRNLVKVLGFCVEGEEKMLVYEYMPNKSLDSFIYDSSQSKLLDWPMRFHILNSIARGLMYLHQDSRLRIIHRDLKASNILLDNDMNAKISDFGLARMCGADQIEGNTSRIVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNRALTLHEHDNNLIGQAWRLWKQEIPEKLIDAYLTGSCNISEAIRCIHAGLLCLQHHPDDRPNMTSVVVMLSSENALPQPNEPGFLIKKVSVEGKQSFEILSSSVNEVTISLMNAR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0046 818 SUPERFAMILY Protein kinase-like (PK-like) 487 789 IPR011009 -
Apr5g0046 818 Gene3D Phosphorylase Kinase; domain 1 461 577 - -
Apr5g0046 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Apr5g0046 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Apr5g0046 818 CDD STKc_IRAK 508 773 - -
Apr5g0046 818 CDD B_lectin 30 153 IPR001480 -
Apr5g0046 818 Pfam PAN-like domain 345 409 IPR003609 -
Apr5g0046 818 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Apr5g0046 818 Pfam D-mannose binding lectin 72 179 IPR001480 -
Apr5g0046 818 Gene3D Hepatocyte Growth Factor 341 422 - -
Apr5g0046 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Apr5g0046 818 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 811 - -
Apr5g0046 818 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 811 - -
Apr5g0046 818 SMART blect_4 30 153 IPR001480 -
Apr5g0046 818 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Apr5g0046 818 Pfam Domain of unknown function (DUF3403) 774 818 IPR021820 GO:0004674
Apr5g0046 818 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0046 818 Gene3D Transferase(Phosphotransferase) domain 1 578 783 - -
Apr5g0046 818 ProSiteProfiles PAN/Apple domain profile. 334 423 IPR003609 -
Apr5g0046 818 Gene3D - 18 150 IPR036426 -
Apr5g0046 818 SMART ntp_6 345 422 IPR003609 -
Apr5g0046 818 CDD PAN_AP_plant 345 423 - -
Apr5g0046 818 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Apr5g0046 818 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0046 818 Pfam Protein tyrosine and serine/threonine kinase 503 771 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0046 Apr-Chr5 439674 443483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0046 448 790 Receptor kinase-like Gene Family AT3G45860 54.885 1.62e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0046 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0046 - - gmx:100790436 1217.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0046 5 439674 443483 Apr5g0046 5 439674 443483 ECH