Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0045 ATGTTTCTTATTTGCAAACTACTGTTGTTTTTCTCTCAAATTTCTCATGCAATTGATACCATTACTCAGTTTAAGTCACTTCCCGATGGCAGCACCTTAGTTTCTAAAGATGGAAGCTTTGAGTTGGGTTTCTTTAACCCTGGTAGTTCCACAAATCGCTATGTTGGAATTTGGTTCAAAAATATCCCTGTAAGAACCATAGTTTGGGTTGCTAATCGTGACAACCCAATTAAAGACAACTCCAGCATGTTGGTGGTAAGCAAAGAGGGAAACCTTGTGCTTCTTAGACAAAATGGGTCTCTTCTTTGGTCAACCAATGTATCAACCCCGGTTTTGAGTCCCATTGTGCAGCTTGTAAACAATGGGAATTTAGTAATTAGAGATGAGAAGGTTGACAATAGTGAAGAGAATTTTTTGTGGCAGAGCTTTGACTATCCTTGTGATATATTGTTACCAGGAATGAAGTTGGGATGGAACCTAAAAACTGGTCACAACCGGCGTCTTACTGCTTGGAAAAATTGGGATGACCCATCTACAGGAGACTTCACTTCAGGTATAAAGCTTGGAAGCAATCCTGAATTGGTATTTTGGAAGGGTTCGGTTGAATACTACAGGAGTGGCCCTTGGAATGGCATTTTGTCTAGTGGAGTATTTGGATTCGGACCAAATCCACTTTTCGATTATAAATATGTCAGCAATGAAAATGAAGTGTATGTCACATATACCCTAAAAAATAGTTCTGTGATTTCAATACTGGTTTTAAACCAAACCCTTTATCTTCGTTCACGCATTACATGGATTCCTCAAACAAGAACTTGGAGTGTATACCAATCCCTACCACAAGATAGCTGCGATGTATATAATGTTTGTGGCGCATATGGGAATTGTATCATTAATTCATCGCCAATATGCCAATGCTTAGAAGGATTCGAACCAAAATCATCCCAAAATTGGAATGCAATGGATTGGACTCAAGGGTGTGTACGCAGTGAACCATGGAGTTGTGGAGTCAAACACAAAGATGGTTTTCGTAGATATGTTGGGATGAAATTGCCTGATACCACACATTCTTGGATAAATAGAAGTATGACACTTGAAGATTGCAAGATCAAATGCTTGGAAAATTGCTCTTGCACAGCTTATGCTAACTTAGACACAAGTGGAGTTGGTAGTGGTTGCTCTCTTTGGTTTGGTGATCTTATTGATTTGAGAGTTTCAGAAAGTGGGCAAGATTTATATGTTCGAATGGCTAATTTAGATAAAGATGCTAAACATGGGCGTCCAAAAAAGCTAGTCTTGGTCCTCGCGACCATAGTTTCGTTAGTCCTTGTGATGCTATTGGCTTTCGTCTACATTTACATGACAAAAGCAAAGTATAAAGAAGAGAAAGGTAAAGGCAGACAAGAAGATTTAGAGTTACCTTTCTTCGATCTTGCTACAATAATTAATGCCACCAATAACTTTTCAATTGACAACAAGCTTGGCGAAGGTGGTTTTGGGCCTGTATACAAGGGTACATTATTAAACGGACAAGAAATTGCAATTAAAAGACTTTCAAAGAGTTCCGGACAAGGATCGAAAGAATTTAAGAATGAAGTGATATTGTGTGCTAAACTTCAACATCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTGAAGGAGAAGAGAAAATGTTACTCTATGAGTACATGCCTAACAAAAGTCTCGATTCCTTCCTTTTTGATTCGACTCAAAGTAAAATTTTAGATTGGCCTACACGCTTCAACATCTTATGTGCAATTGCTCGAGGGCTTCTTTATCTTCACCAAGATTCTAGATTGCGGATTATACATAGAGATTTAAAAGCAAGTAATATTTTATTAGACAACAGCATGAATCCAAAAATTTCAGATTTTGGCCTAGCTAGATTGTGTGGGGCTGATCAAGTTGAAGGCAATACAAATCGAATTGTTGGGACATACGGATACATGGCACCTGAATATGCAATTGATGGAATATTCTCCATAAAATCAGATGTATTTAGCTATGGCGTATTATTGTTGGAAATTGTTAGTGGAAAGAAAAACAAAACACTTACCTATGAAGACCGTGATTATAATCTTACTGGACATGCATGGAGATTATGGAAAGAGGGTACCCCAGAGCAATTGATTGATGGTTGTTTGGTAGACTCATGTAATATAACTGAAGTTGTACGATGCATTCAAGTTGGTCTTTTATGTTTGCAACATCATCCCAATGATCGGCCAAACATGACATCTGTGGTTGTGATGCTTAGTAGTGAAAATGTTTTACTTCAACCTAAGGAACCTGGTTTCTTATTTAAAAATGTTTCAATTGAAGGAGAAGAGTCTTCTGATAAACAAACATCTTCTATCAATGAAGTAACAATCTCACTGTTAAATGCTAGATAG 2415 0.3756 MFLICKLLLFFSQISHAIDTITQFKSLPDGSTLVSKDGSFELGFFNPGSSTNRYVGIWFKNIPVRTIVWVANRDNPIKDNSSMLVVSKEGNLVLLRQNGSLLWSTNVSTPVLSPIVQLVNNGNLVIRDEKVDNSEENFLWQSFDYPCDILLPGMKLGWNLKTGHNRRLTAWKNWDDPSTGDFTSGIKLGSNPELVFWKGSVEYYRSGPWNGILSSGVFGFGPNPLFDYKYVSNENEVYVTYTLKNSSVISILVLNQTLYLRSRITWIPQTRTWSVYQSLPQDSCDVYNVCGAYGNCIINSSPICQCLEGFEPKSSQNWNAMDWTQGCVRSEPWSCGVKHKDGFRRYVGMKLPDTTHSWINRSMTLEDCKIKCLENCSCTAYANLDTSGVGSGCSLWFGDLIDLRVSESGQDLYVRMANLDKDAKHGRPKKLVLVLATIVSLVLVMLLAFVYIYMTKAKYKEEKGKGRQEDLELPFFDLATIINATNNFSIDNKLGEGGFGPVYKGTLLNGQEIAIKRLSKSSGQGSKEFKNEVILCAKLQHRNLVKVLGCCIEGEEKMLLYEYMPNKSLDSFLFDSTQSKILDWPTRFNILCAIARGLLYLHQDSRLRIIHRDLKASNILLDNSMNPKISDFGLARLCGADQVEGNTNRIVGTYGYMAPEYAIDGIFSIKSDVFSYGVLLLEIVSGKKNKTLTYEDRDYNLTGHAWRLWKEGTPEQLIDGCLVDSCNITEVVRCIQVGLLCLQHHPNDRPNMTSVVVMLSSENVLLQPKEPGFLFKNVSIEGEESSDKQTSSINEVTISLLNAR* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0045 804 ProSiteProfiles Bulb-type lectin domain profile. 18 139 IPR001480 -
Apr5g0045 804 CDD B_lectin 26 146 IPR001480 -
Apr5g0045 804 Gene3D Hepatocyte Growth Factor 334 416 - -
Apr5g0045 804 Pfam Protein tyrosine and serine/threonine kinase 489 757 IPR001245 GO:0004672|GO:0006468
Apr5g0045 804 ProSiteProfiles PAN/Apple domain profile. 335 417 IPR003609 -
Apr5g0045 804 CDD STKc_IRAK 494 759 - -
Apr5g0045 804 Pfam D-mannose binding lectin 66 172 IPR001480 -
Apr5g0045 804 SMART serkin_6 488 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0045 804 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 798 - -
Apr5g0045 804 ProSiteProfiles EGF-like domain profile. 280 316 IPR000742 -
Apr5g0045 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 177 IPR036426 -
Apr5g0045 804 Pfam S-locus glycoprotein domain 204 314 IPR000858 GO:0048544
Apr5g0045 804 Gene3D Phosphorylase Kinase; domain 1 450 563 - -
Apr5g0045 804 SMART blect_4 24 146 IPR001480 -
Apr5g0045 804 Pfam PAN-like domain 335 403 IPR003609 -
Apr5g0045 804 SUPERFAMILY Protein kinase-like (PK-like) 472 768 IPR011009 -
Apr5g0045 804 CDD PAN_AP_plant 334 417 - -
Apr5g0045 804 Gene3D - 12 143 IPR036426 -
Apr5g0045 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Apr5g0045 804 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 26 798 - -
Apr5g0045 804 Gene3D Transferase(Phosphotransferase) domain 1 564 769 - -
Apr5g0045 804 ProSiteProfiles Protein kinase domain profile. 488 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0045 804 SMART ntp_6 338 416 IPR003609 -
Apr5g0045 804 Pfam Domain of unknown function (DUF3403) 762 804 IPR021820 GO:0004674
Apr5g0045 804 PIRSF SRK 1 804 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0045 Apr-Chr5 434429 438052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0045 432 773 Receptor kinase-like Gene Family AT4G23230 56.000 5.18e-128 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0045 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0045 - - gmx:100790436 1355.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0045 5 434429 438052 Apr5g0045 5 434429 438052 ECH