Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0044 ATGACAATTTTCACTGTCACACTTGTTATCGCCAAGCTATTCTTCTTCTTCTTCTTCTCTTCAAAAGCTTCCTCAACAACCGATACCATTACCCTCTTACAACCACTTCCCGATGGAAGCACCTTGGTGTCCCAAAATGGAACCTTTGAGTTGGGTTTCTTTTCTCTAAGAAATTCCACAAATCGGTATGTGGGAATTTGGTTCAAAAATATACCAATAAGAACCATTGTTTGGGTTGCCAACCGTGACAATCCTCTCAAAGACAACTCCAACATGTTGAGTATAAGCAAGGGAAATCTTGTCCTTCTCAACAAAAATGGCACGGTTCATTGGTCAACAAATGCAACAAGAAGGATCTTGAGTCCCATTGTGCAACTCTTAGACACGGGAAATTTAGTACTTCGAGACAAGCACGGCAATAACGACCTTGAAAATTTCTTGTGGCAAAGCTTTGATTATCCTTCTAATACATTATTACCAGGAATGAAGCTAGGATATGATAAAAAAACCGGTTTCAATCGACATATAACTTCTTGGAAGAATTGGGATGACCCTTCTCCTGGGAACTTTACTTGGGGTATCACACTTGATATCAATCCTGAAATGGAACTATGGAATGGTTCAGTTAAGGTCCATAGGAGTGGCCCTTGGAACGGTGTTAGATTCAGTGGTGCATTTAGTGGTTCAAATGTGTTAAGCACTCACCCACTTTATGTTTATAAACTGGTCAATAATGACGATGAGGTGTATTACACATATAACCCAACAAACAAGTCTGTGATTTCAATTGTTGTTATGAACCAAACCATTTATAGTCGCCAGCGCATCATTTGGATTCCGGAAAATGGAACATGGAGGCTTTTCCAAACAACACCAAGAGATATATGTGACACTTATAATCCTTGCGGCCCATATGCAAATTGCATGGTTAATGGATCACTAGTTTGTCAATGTTTAGAAGGATTTGCTCCAAATTCGTTCCAAAATTCAGAGACAAATGATTTGGTAGTGCAAGGATGCGGGAGAAGTGAACCTTGGGCTTGTAAGGTCCAAGGCAAAGATGGTTTTCGAAGATTTGTTGGGTTGAAATTTCCAGATACTACGCATTCTTGGATTAATAGAAGTATGACACTCGAGGATTGCAAGGCCAAATGCTATGAAAATTGTTCTTGCACTGCTTATGCAAACTTAGATGTAAGAGGAGGAGGTAGTGGTTGTTCCATTTGGTTTGGTGATCTTATTGATTTGAAAGAGGTTTCACAAAGTGGGCAATTTCTATATGTTCGAATGGCTAATTCACAAAAAGATGGTATTGATGACCATAAGAAAATGGCAGTTCTGATAAGTGCAACCATACTTCCTACTGTTCTCGTGATACTATTATTGGCGATCTCCTTCAACTACTGGAGAAAACGAAAGAATAAAGGAAAAAAGACGTTTATAACGGAGAAAGATGAAGCTGGTGGACAAGAAGACATGGAACTACCAATGTTTGATCTTGCTACATTGGTTAACGCCACCAACAATTTCTCAATTGATAACAAACTCGGGCAAGGTGGTTTTGGGCCAGTATACAAGGGTGTACTATCAAATGGACAAGAGATTGCTGTCAAAAGACTATCAAGGAGTTCTGTACAAGGATTAAAAGAATTTAAGAATGAAGTTATGTTGTGTGCCAAACTTCAACATCGAAATCTTGTCAAAGTTCTTGGTTGTTGCATTGAAGAAGAGGAGAAGATGCTTCTCTATGAATACATGCCCAACAAGAGCCTCGACTTGTTTCTTTTCGATTCAACACAAAGCAAGATTTTGGATTGGCCTAAGCGCTTTCAAATTTTATGTGCAATTTCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGGATAATACACCGAGATTTAAAAGCGAGCAACATTTTACTAGACAACAACATGAACCCAAAAATTTCAGATTTTGGCTTGGCCAGAATGTGTGGAGGTGATCAAATTGAAGGAAATACAAATAGAGTAGTAGGAACATATGGTTATATGGCACCCGAATATGTTATCCATGGATTATTCTCTACAAAATCAGATGTATTTAGCTTTGGCATATTACTACTGGAAATTATTAGTGGAAAGAAAAACAGAGAACTTACCTATCCATACCATAGTCATAATCTCATTGGGCATACTTGGAAGTTATGGAAAGAAGGCATTCCAAAGGAATTGATAGATACTTGTTTGGCCGACTCTTGTAATCTATCAGAAGCCTTACGATGCATTCATATTGGTCTTTTATGTCTACAACATCAACCAGCTGATCGACCAAACATGGCATCTGTAGTTGTTATGTTAAATACTGAGAGTGAATTGCTCCAACCAAAGGAACCTGGTTTCTTAATAGATAGAGTCTTAAATGAAGATTCTCAATATAGAAACCAAACATCTTCAACAAATGAAATAACTATTTCACTCATGGATGCTAGATAA 2478 0.3793 MTIFTVTLVIAKLFFFFFFSSKASSTTDTITLLQPLPDGSTLVSQNGTFELGFFSLRNSTNRYVGIWFKNIPIRTIVWVANRDNPLKDNSNMLSISKGNLVLLNKNGTVHWSTNATRRILSPIVQLLDTGNLVLRDKHGNNDLENFLWQSFDYPSNTLLPGMKLGYDKKTGFNRHITSWKNWDDPSPGNFTWGITLDINPEMELWNGSVKVHRSGPWNGVRFSGAFSGSNVLSTHPLYVYKLVNNDDEVYYTYNPTNKSVISIVVMNQTIYSRQRIIWIPENGTWRLFQTTPRDICDTYNPCGPYANCMVNGSLVCQCLEGFAPNSFQNSETNDLVVQGCGRSEPWACKVQGKDGFRRFVGLKFPDTTHSWINRSMTLEDCKAKCYENCSCTAYANLDVRGGGSGCSIWFGDLIDLKEVSQSGQFLYVRMANSQKDGIDDHKKMAVLISATILPTVLVILLLAISFNYWRKRKNKGKKTFITEKDEAGGQEDMELPMFDLATLVNATNNFSIDNKLGQGGFGPVYKGVLSNGQEIAVKRLSRSSVQGLKEFKNEVMLCAKLQHRNLVKVLGCCIEEEEKMLLYEYMPNKSLDLFLFDSTQSKILDWPKRFQILCAISRGLLYLHQDSRLRIIHRDLKASNILLDNNMNPKISDFGLARMCGGDQIEGNTNRVVGTYGYMAPEYVIHGLFSTKSDVFSFGILLLEIISGKKNRELTYPYHSHNLIGHTWKLWKEGIPKELIDTCLADSCNLSEALRCIHIGLLCLQHQPADRPNMASVVVMLNTESELLQPKEPGFLIDRVLNEDSQYRNQTSSTNEITISLMDAR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0044 825 Gene3D - 21 151 IPR036426 -
Apr5g0044 825 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Apr5g0044 825 SMART ntp_6 351 430 IPR003609 -
Apr5g0044 825 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Apr5g0044 825 Pfam Protein tyrosine and serine/threonine kinase 511 779 IPR001245 GO:0004672|GO:0006468
Apr5g0044 825 CDD B_lectin 34 154 IPR001480 -
Apr5g0044 825 Gene3D Hepatocyte Growth Factor 347 428 - -
Apr5g0044 825 Pfam D-mannose binding lectin 75 180 IPR001480 -
Apr5g0044 825 SUPERFAMILY Protein kinase-like (PK-like) 492 803 IPR011009 -
Apr5g0044 825 CDD PAN_AP_plant 348 431 - -
Apr5g0044 825 Pfam PAN-like domain 348 416 IPR003609 -
Apr5g0044 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Apr5g0044 825 Gene3D Phosphorylase Kinase; domain 1 471 585 - -
Apr5g0044 825 CDD STKc_IRAK 516 782 - -
Apr5g0044 825 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 35 819 - -
Apr5g0044 825 Pfam S-locus glycoprotein domain 213 325 IPR000858 GO:0048544
Apr5g0044 825 SMART blect_4 33 154 IPR001480 -
Apr5g0044 825 ProSiteProfiles Protein kinase domain profile. 510 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0044 825 SMART serkin_6 510 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0044 825 Pfam Domain of unknown function (DUF3403) 782 825 IPR021820 GO:0004674
Apr5g0044 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Apr5g0044 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 185 IPR036426 -
Apr5g0044 825 Gene3D Transferase(Phosphotransferase) domain 1 586 792 - -
Apr5g0044 825 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
Apr5g0044 825 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 35 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0044 Apr-Chr5 427946 431463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0044 446 797 Receptor kinase-like Gene Family AT4G23230 53.541 1.34e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0044 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0044 - - gmx:100794112 1311.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0044 5 427946 431463 Apr5g0044 5 427946 431463 ECH