Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0043 ATGGCCACTATTCCTTTTATGTTGGTTATTTTTAAGCTATTATTATCCTTTTTCTCTCATTTTTCCTTTGCAACTGATACGATTTCCCAAACTCAGCCACTTGCTGATGGCAGCACCTTGGTTTCCAACGATGGAACCTTTGAGTTGGGTTTCTTCAATCCAGGTAGTTCCTCAAACCGGTATGTTGGGATATGGTACAAAAACATCCCAGTTAGAACAATCGTTTGGGTAGCCAACAGTGACAACCCAATCAAAGACAACTCCAGCAAGTTGATCATAAGCCAAGAAGGAAACCTCGTACTTCTCAGCCACAACCAAACCCTTCTTTGGTCGACAAACACCACAACAAAGTCTTTAACTTTGACTCCCTTTGTTCAGCTCTTAGACACTGGCAATTTAGTGCTTAGAAGCGAAAACAACAATGAAGAGAATTTCCTATGGCAAAGCTTTGATCATCCATCTAATACAATGTTGCCAGGAATGAAACTAGGATGGGACCTAAAAACTGGTCTTAATAGACGCATAACTTCATGGAAGAATTGGGATGACCCATCTCCAGGAGATTTTTCATGGGGCATTGTACTCACTGGTAACCCAGAAATGGCAATGTGGAAGGGCTATGATGAGTCCTATAGGAGTGGACCTTGGAATGGTATTCGGTTTAGTGGATCACCCACAATGAGGGAAAACCCAGTTTACAATTATCAATTTGTGAACAATTCAGATGAGGTCTTCTTCACATACACCCTCAAGAATAAGTCTATGATCTCAATAATTGTCATGAACCAAACCCTTTTTCTCCGCCAACGCTTCACGTGGATTCCTGACAACTCAACATGGAGGCCTTACCATTCTATACCAAGAGACAATTGTGACACTTATAATCTTTGTGGCCCAAATGGAAATTGTGTTGTGGGTGAATCACCCGTATGCCAGTGTTTAGATGGGTTCAAGCCCCAGTCTTCTCAAAATTGGGAAGCAATGGATTGGACACAGGGTTGTGTGAGGAGTCAACAATGGAGTTGCAAAGTCAAAGGCAAAGATGGGTTTCGTAGATTTGGTAGCATGAAATTGCCGGATACTACACATTCTTGGGTTAATGAAACTATGACACTTGATGAGTGTAAGGCTAAATGCTTAGAAAATTGCTCTTGCACGGCTTATTCTAACTCAGATATTAGGGGAGAAGGTAGCGGATGTGCCATTTGGTTTGGTAATCTTTTTAATTTGAGGATTATAGAAAGTGGACAAGATCTATATATTCGAGTGGCAACTTCAGACATAGCTGTAAATGATGATGCAAAACATGGGCACACGAAAAATATTGCTTTAGTAATAACAATCACACTTGTGTTTGTCCTCGTCCTGCTTTCCGCTTTCTTCTACTTTTACAGAGGTATATTTTCTTACCAAGTTTTGAAAACAGAGAAAAACTTGTCAACTGAAAAGAAACATGAAGGACAAGAAGACTTCGAACTTCCATTCTTTGATCTTGCTACGGTAATCAATGCTACCAACGACTTCTCAATTGACAAAAAGCTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGTACATTAGTAGATGGACAAGAGATTGCCGTGAAAAGACTTTCTAAGAGTTCTCGACAAGGATTACAAGAATTTAAGAATGAAGTTATATTATGTGCAAAACTTCAACATCGAAATCTTGTTAAAGTTATTGGTTGTTGTATTGAAGGAGAAGAGAAAATGCTTCTCTACGAATACATGCCCAATAAAAGCCTAGATTCATTTATTTTTGATTCTACCCAAAGTAAACGTTTAGATTGGCCTAAACGTTTCTCCATTATTAGTGGAATTGCAAGAGGACTGTTGTATCTACATCATGATTCCAGATTAAGGATCATACATAGGGATCTTAAAGCAAGCAACATTTTATTAGATAATGAGATGAACCCAAAAATTTCAGATTTTGGCTTGGCTAGAATATGTGGAGGAGATCAAATTGAAGGAAATACAAGCAGAGTAGTTGGTACATATGGTTATATGGCACCAGAATATGCTATTGATGGATTATTTTCCATCAAATCTGATGTTTTTAGCTTTGGGATATTGTTATTGGAGATTATTAGCGGAATGAAAAACAAAGGATTTTCCCATCCAAGTCACAATTATAATCTTATTGGAAATGCATGGAAGTTGTGGAAAGAAGGAATTCCATTGAAATTGATGGATACTTGTTTGCATGACTCTTGTATTCCATATGAAGTTTGTCGTTGCATTCATATTGGTCTTTTATGTGTGCAACAAAATCTTAATGATAGACCGGACATGACATCTATAGTTGTGATGTTGAGTAGTGAAAATGCTTTACCTCAACCAAAGGAGCCCAATTTCTTAATAGAAAATGATATAACTGAAGGAGAATTTTCATCTTTGAAGCAAATATCTTCAACCAATGAAGTAACTGTCTCATTGTTAGAAGCAAGATAA 2475 0.3786 MATIPFMLVIFKLLLSFFSHFSFATDTISQTQPLADGSTLVSNDGTFELGFFNPGSSSNRYVGIWYKNIPVRTIVWVANSDNPIKDNSSKLIISQEGNLVLLSHNQTLLWSTNTTTKSLTLTPFVQLLDTGNLVLRSENNNEENFLWQSFDHPSNTMLPGMKLGWDLKTGLNRRITSWKNWDDPSPGDFSWGIVLTGNPEMAMWKGYDESYRSGPWNGIRFSGSPTMRENPVYNYQFVNNSDEVFFTYTLKNKSMISIIVMNQTLFLRQRFTWIPDNSTWRPYHSIPRDNCDTYNLCGPNGNCVVGESPVCQCLDGFKPQSSQNWEAMDWTQGCVRSQQWSCKVKGKDGFRRFGSMKLPDTTHSWVNETMTLDECKAKCLENCSCTAYSNSDIRGEGSGCAIWFGNLFNLRIIESGQDLYIRVATSDIAVNDDAKHGHTKNIALVITITLVFVLVLLSAFFYFYRGIFSYQVLKTEKNLSTEKKHEGQEDFELPFFDLATVINATNDFSIDKKLGEGGFGPVYKGTLVDGQEIAVKRLSKSSRQGLQEFKNEVILCAKLQHRNLVKVIGCCIEGEEKMLLYEYMPNKSLDSFIFDSTQSKRLDWPKRFSIISGIARGLLYLHHDSRLRIIHRDLKASNILLDNEMNPKISDFGLARICGGDQIEGNTSRVVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIISGMKNKGFSHPSHNYNLIGNAWKLWKEGIPLKLMDTCLHDSCIPYEVCRCIHIGLLCVQQNLNDRPDMTSIVVMLSSENALPQPKEPNFLIENDITEGEFSSLKQISSTNEVTVSLLEAR* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0043 824 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Apr5g0043 824 SMART blect_4 31 153 IPR001480 -
Apr5g0043 824 Pfam D-mannose binding lectin 73 179 IPR001480 -
Apr5g0043 824 CDD STKc_IRAK 514 779 - -
Apr5g0043 824 ProSiteProfiles PAN/Apple domain profile. 342 424 IPR003609 -
Apr5g0043 824 Pfam Domain of unknown function (DUF3403) 780 824 IPR021820 GO:0004674
Apr5g0043 824 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Apr5g0043 824 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 33 818 - -
Apr5g0043 824 Pfam PAN-like domain 342 410 IPR003609 -
Apr5g0043 824 CDD B_lectin 31 153 IPR001480 -
Apr5g0043 824 Gene3D Transferase(Phosphotransferase) domain 1 584 792 - -
Apr5g0043 824 SMART ntp_6 345 423 IPR003609 -
Apr5g0043 824 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 818 - -
Apr5g0043 824 SUPERFAMILY Protein kinase-like (PK-like) 491 787 IPR011009 -
Apr5g0043 824 CDD PAN_AP_plant 341 424 - -
Apr5g0043 824 ProSiteProfiles Protein kinase domain profile. 508 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0043 824 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Apr5g0043 824 PIRSF SRK 1 824 IPR024171 GO:0004674
Apr5g0043 824 Gene3D - 19 151 IPR036426 -
Apr5g0043 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 184 IPR036426 -
Apr5g0043 824 Pfam Protein tyrosine and serine/threonine kinase 509 777 IPR001245 GO:0004672|GO:0006468
Apr5g0043 824 SMART serkin_6 508 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0043 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Apr5g0043 824 Gene3D Phosphorylase Kinase; domain 1 468 583 - -
Apr5g0043 824 Gene3D Hepatocyte Growth Factor 341 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0043 Apr-Chr5 404545 407761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0043 442 797 Receptor kinase-like Gene Family AT4G23230 53.760 1.39e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0043 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0043 - - gmx:100776310 1123.23