Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0041 ATGGATATTCTTTCTTTATTGATCACTGTTCCATGTATACTTATCCTCTTTCTCAGAGTTTCCACAGCAGTTGATACCATTCATATGTCTCAGTCCATTAGTGATGGCATGACCCTAGTTTCCCGAGGTGAAACATTTGAACTTGGTTTCTTCAGTCCCGAGAACTCCAACAAACGTTACCTTGGAATTTGGTACAAGAACATTCCACTTACGACAGTTGTTTGGGTTGCAAATGGTGCCATCAATGATTCCTCAGGCACCTTAACACTGAACAGCACAGGCAACCTTATTCTCAGACAACATGACAAGGTTGTTTGGTTGACAACATCTGAGAAACAAACACAAAATCCAGTGGCACAGCTTCTAGATTCAGGGAACCTTGTGGTTAGAGATGAGAATGATGCAAACCCAGATGCTTATTTGTGGCAAAGTTTTGATTACCCTTCAGATACAACACTGCCAGGGATGAAGTTGGGATGGAACCTCAAGACTGGTCAAGAATGGAGAATGACATCTTGGAAGAGTCCTAATGATCCCTCCCCTGGAGACTTCTATTGGGGCCTTTTGCTTCATAATTATCCTGAGTTTTATCTAATGAAGGGAACACAAAAGTTTGTGAGAATTGGACCCTGGAGTGGCCTATATTTCAGTGGTATACCAGATCAAAAGCCTAACCCCATTTATGATTTCAACTACATATCCAATAAGGATGAGATTTACTACAATTATAGTCTTGTGAATGAAGCTGTGATCTCAAGATTGGTCATGAATCAAACCACTTCGACTTGTACGCGATACGTATGGATGGAGGATGATCAAATCTGGAAGGTATATAAATCACTGCCAAAAGACAATTGTGACTTTTATGGCACCTGTGGAGCCTATGGGGCTTGCACGATTGCAGGCTCCCAAATATGCGAATGTTTAGAAGGGTTTAGTCCTAAGTCACCACAAGCATGGAACTCATCTGATTGGACTGAAGGATGTGTCCGCAATAAACCACTAAACTGCACTAACAAACTCAAGGATGGATTTATGAAAGTGGAAGGAGTAAAAGTGCCAGATACTACACATACTTTAGTAGATGAGACAATTGGCCTAGAAGACTGCAGAGTCAAGTGCTTGAATAATTGTTCTTGTATGGCTTATACTAACTTTGACATAAGAGGAAAAGGTAGTGGCTGTGTCATGTGGTTTGGCAATCTAATTGATATTAGGCAGTTTGATAATCAGGGGCAGGATCTGTATATTCGAATGGATGCTTCAGAATTGGGAGAACAAGATGGGCGTAGGAAGTATGTGATGATAATAGTTGGTACCACCATTGCTGCAATATCAGTGATGATTTTTATTGGATGTTGTCGTATCTACATTGTCCGGCCCATGAATTCGCAAATTCTATTAGGTGATCAAAATAGAGGAGGTAACGAGGATGATCTCGACCTGCCACTGCTTGACCATTCAACAGTAGTCACTGCCACAGATAACTTCTCAATAAAGAACAAGATTGGAGAAGGTGGTTTTGGACCTGTATACCAGGGAAGATTGGTAAGTGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGTTCAGGACAAGGAATGACAGAGTTTAAGAATGAAGTAAAACTGATAGCAAAACTTCAACACCGAAATCTTGTCAAGCTTCTTGGTTGTTGCCTTCAGGAACAAGATAGAATGCTGGTTTATGAATACATGACTAACCGTAGTTTGGATCGGTGGATTTTTGATGATACAAAAAGCAAATTGTTAGATTGGCCTAAGCGCTTCAACATTATCTGTGGAATTGCTAGAGGTCTTCTCTATCTTCATCAAGATTCTAGATTGAGGATAATTCATAGAGACCTTAAAGCAAGCAACGTTTTGCTTGATGACCAGATGAACCCAAAAATATCTGATTTTGGCATTGCCAGAATTTTTGGAGGAGATCAGACAGAAGGAAATACTACAAGAGTAGTTGGAACTTATGGTTACATGGCACCAGAATATGCTGCTGATGGACTATTTTCTATAAAATCTGATATTTTTAGCTTTGGTATTCTACTGCTGGAGATAATAAGTGGAAAGAGAAGTAGAGGTTTCTATCTTGACAGCCACTCTCCTAACCTTGTCACTCATGCATGGAGTCTGTGGAAAGAGGGAAGGCCATTAGAAATGTTTGACTCAGACATAGAAGATTCTTGTGTTCTATCAGAGGTATTGCGATGCATCCATGTAAGTCTTTTATGTGTCCAACAACATCCAGAGGATAGGCCTGTCATGCCTTCTGTGGTTCTAATGTTAGGGAGTGATAGTGAATTAGCTGAGCCAAAACAACCTGGTTTCTATGTAAAGAATGATTCAACTGCAACAACTTCTTTCACTGGTCGAAGTGATGTGATCTCAACCAATGAAATGACTATCACCTTGTTAGAAGCCAGATGA 2445 0.4025 MDILSLLITVPCILILFLRVSTAVDTIHMSQSISDGMTLVSRGETFELGFFSPENSNKRYLGIWYKNIPLTTVVWVANGAINDSSGTLTLNSTGNLILRQHDKVVWLTTSEKQTQNPVAQLLDSGNLVVRDENDANPDAYLWQSFDYPSDTTLPGMKLGWNLKTGQEWRMTSWKSPNDPSPGDFYWGLLLHNYPEFYLMKGTQKFVRIGPWSGLYFSGIPDQKPNPIYDFNYISNKDEIYYNYSLVNEAVISRLVMNQTTSTCTRYVWMEDDQIWKVYKSLPKDNCDFYGTCGAYGACTIAGSQICECLEGFSPKSPQAWNSSDWTEGCVRNKPLNCTNKLKDGFMKVEGVKVPDTTHTLVDETIGLEDCRVKCLNNCSCMAYTNFDIRGKGSGCVMWFGNLIDIRQFDNQGQDLYIRMDASELGEQDGRRKYVMIIVGTTIAAISVMIFIGCCRIYIVRPMNSQILLGDQNRGGNEDDLDLPLLDHSTVVTATDNFSIKNKIGEGGFGPVYQGRLVSGQEIAVKRLSRSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCLQEQDRMLVYEYMTNRSLDRWIFDDTKSKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDQMNPKISDFGIARIFGGDQTEGNTTRVVGTYGYMAPEYAADGLFSIKSDIFSFGILLLEIISGKRSRGFYLDSHSPNLVTHAWSLWKEGRPLEMFDSDIEDSCVLSEVLRCIHVSLLCVQQHPEDRPVMPSVVLMLGSDSELAEPKQPGFYVKNDSTATTSFTGRSDVISTNEMTITLLEAR* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0041 814 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Apr5g0041 814 SMART ntp_6 340 419 IPR003609 -
Apr5g0041 814 Pfam PAN-like domain 337 405 IPR003609 -
Apr5g0041 814 Gene3D Transferase(Phosphotransferase) domain 1 573 782 - -
Apr5g0041 814 SMART blect_4 30 148 IPR001480 -
Apr5g0041 814 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 31 813 - -
Apr5g0041 814 SMART serkin_6 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0041 814 Pfam D-mannose binding lectin 72 174 IPR001480 -
Apr5g0041 814 SUPERFAMILY Protein kinase-like (PK-like) 484 768 IPR011009 -
Apr5g0041 814 CDD B_lectin 30 148 IPR001480 -
Apr5g0041 814 Pfam Protein tyrosine and serine/threonine kinase 498 764 IPR001245 GO:0004672|GO:0006468
Apr5g0041 814 Gene3D - 19 145 IPR036426 -
Apr5g0041 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 179 IPR036426 -
Apr5g0041 814 ProSiteProfiles Protein kinase domain profile. 497 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0041 814 CDD STKc_IRAK 503 768 - -
Apr5g0041 814 Pfam Domain of unknown function (DUF3403) 771 814 IPR021820 GO:0004674
Apr5g0041 814 ProSiteProfiles PAN/Apple domain profile. 337 420 IPR003609 -
Apr5g0041 814 Gene3D Phosphorylase Kinase; domain 1 474 572 - -
Apr5g0041 814 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
Apr5g0041 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Apr5g0041 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Apr5g0041 814 CDD PAN_AP_plant 334 418 - -
Apr5g0041 814 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 813 - -
Apr5g0041 814 Gene3D Hepatocyte Growth Factor 336 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0041 Apr-Chr5 385676 389448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0041 489 814 Receptor kinase-like Gene Family AT4G11530 57.057 6.97e-127 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0041 PK_Tyr_Ser-Thr 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0041 - - gmx:100775648 1385.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0041 5 385676 389448 Apr5g0041 5 385676 389448 ECH