Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0035 ATGGCCATTCTTTCTTTCATGATTATGGTTGGTTACATACTTGTTCCCTCTCTCAAATTTTCCATAGCCATTGATTCTATTAATATGTTCCAGTCTATGAGTGATGGACAGACATTAGTGTCAAAAGGTGGAAAGTTTGAACTTGGTCTCTTCAGTCCCAACAATTCCACCAAACGTTACCTGGGAATTTGGTACAAGAATATCCCAATTCAAACAGTTGTGTGGGTTGCTAATGGAGCCAACCCCATCAACAATTCCTTTGGCATATTAACACTAAATAGCACAGGCAATCTCATGCTAACCCAAAATGGCTCTATTGTTTGGTCTACAGACTCAAAAAAACAAGCACAGAATCCAGTGGCAACACTCTTTCACACTGGCAATCTTGTGGTGGGAAATGAAGGAGAAACAAACCCAGAAGCTTACTTATGGCAAAGCTTTGACTATCCATCTGATACATTTTTGCCAGGAATGAAGTTGGGATGGGACCTTCGAATTGGTCTTGAAAGGAAAATCACATCTTGGAGGAGTCCAAATGATCCATCTCCTGGAGATTTTCATCGGACATTAGCTCTCAATTCATATCCCGAGTTTTATTTGATGAATAGAACACAAAAGTTCTTCCGGTTTGCACCTTGGAATGGCCTATACGTTAGTGGTACTATATATCCAAGAATTACTCATTCCTCTTATACAAAATTTGTCTCCAATAAGAATGAATTGTTCTACACGTATATCATCACGAATGATTCTATCCTTGCTAGAGGGGTAATAAATCAAACCAGTTATAGTTATGACAGATTATATTGGGATGATAGTGCTCAAACATGGGAAAGAACTTCAACGTTCCCAGCGGACATTTGTGACACTTATGATCTTTGTGGAGCCTATGCGAATTGCATTCCTACAGAATCTCCACCATGCTTATGCTTAGAAGGATTCAGTCCAAAGTCCCCTCAAGCATGGAACTCGTCTGATTGGAATGAAGGGTGTGTCCGCGATAAACCATTACATTGCAAAGACAAACACTCAGATCAATTTGTAAAATATGAACGGCTTAAACCACCAGATACTTCACACACATGGCTAGATGAGAATATTGGTTTAGAAGAATGCAACGACAAGTGCTTGAATAATTGTTCTTGCAAAGCATATGCAAATTCAGATATAAGAGAAGGAGGTAGCGGTTGTGTCTTGTGGTTTGGGGATCTCATTGATATTAGACAGTTTCTAGCTGATGAGATAGATATATATATCCGAATGTCTGCTTCAGAGATAGGTAAAGACTATATTTTTGTTTCTAACAAAACAATAATTGTCACAACCGTAGCTATAACTTGCGGGATACTTTTGCTTTGTATTTATTTTATCTGCAGAGTCCGTAAAAGCATTACTGAGAGGTCAAAGACAGAAGATAACAATGAAAGGCACGTAGATGAATTAGATCTCTCGTTGTTTGACCTGCAAACAATAAAAACTGCCACTATGAACTTCTTGATAAAGAATAAGATTGGAGAAGGTGGTTTTGGGCCTGTATATTGGGGGAAGTTAGCAGATGGACAAGAAATTGCTGTGAAAAGACTTTCAAGAAGCTCAGGACAAGGAATGACTGAGTTCAAAAATGAAGTAAAGCTAATTGCAAAACTTCAGCACCGAAATCTTGTAAAACTTCTAGGTTGTTGCATTCATGGACAAGAAAAATTGTTAGTTTATGAATTCATGCCTAACGGAAGCTTAGACTCCTTCATTTACGATCACACTAAAGGTAAATTGCTACATTGGTCTCATCGTTTTCACATAATATTTGGAATTGCTCGAGGACTTTTGTATCTTCATCAAGATTCCCGATTAAGAATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGATAAGTTGAATCCTAAGATATCAGATTTTGGAATAGCAAAAGCTGTTGGAGGAGACGAGACTGAAGGAAATACAAACAGAGTGGCTGGGACTTATGGATACATGGCACCAGAGTATGCAGTTGATGGGTTATTTTCAATCAAGTCTGATGTTTTCAGTTTTGGTATCTTATTGTTAGAGATCATATGCGGGAAAAAGAATAGAGCTCTTTGTTATGCAAATCACACCTTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAAGGCATGGTTTCACAATTGATTGACCCAAGCATAAAACAATCATGCATTGTCTCAGAAGCATTGCGTTGCATCCATGTTGGTCTCTTATGCGTGCAACAATATCCGAAAGATAGGCCTACAATGACTTCAGTGGTTCAAATGTTAGGGAGTGAGATGGAAATAGTTGAACCAAAAGAGCCAGGCTTCTATCTGAATGTCTCTAATGAAACAAATTTACCCTTAAATCCAATAGGAGTGAATTCATACGTTGAATTAACCGATGTCACATTAGATGGCAGTACTAGTGGGGAGGACAATTGGGAACAGATTGAAAGTTATTCGTATGAGAATTGCAGAACTTTGGAAACAAGAGATGTACTGAGTAATTCAGTCAAGTATTCAAATGAAAAATACCCAAAAAGCTGGAACTCCATGGATATTCTTTGTTTCATGTTTATGGTTGCAGGTTTACTAGTTCCATCTTCCATAGCAATTGATTCCATTAGTGTGTCGCAGTTCATTACTGATGACAAGACCTTGGTGTCTCAAGGTGGAATATTTGAGCTTGGTTTCTTCAGCCCAGGTAGTTCTAACAAACGTTACTTAGGTATTTGGTACAAGAACATCCCAGATAAGAAAGTTGTTTGGGTTGCAAATAGGGAAATCCCCATCAATGGTTCCTCGGGTATGTTAAGAGTTAACAGCACAGGCAACCTTGTGCTAAGCCAAAATGGGTCTGTTGTTTGGCACACAAAGTCTCAGAAACAAGGAAAGAATCCAATGATGGTGCTTTTGGACAGTGGCAATCTTGTGGTAAAAAATGAGGGAGAAAAAAACCCAGAAGACTATTTGTGGCAAAGTTTTGATTATCTATCTGATACAGTATTGCAAGAGATGAAGTTGGGATGGAACCTCAAACTTGGTATAGATTGGAGATTAACATCATGGAAGAGTCCAGATGATCCATCTCGTGGAGACCTTTCTTGGGCTTTAGTACTCAATGATTATCCTGAGTATTATATGATGAAGGGGACAGAAAAAATCTTCAGAATTGGACCTTGGAATGGCCAATATTTCAGTGGAACACCAGGTTTACAACCCAACCCCATCTTTAATTTTAAGTATGTTACCACAAAGGATGAGATTTTTTACTCATATACCCTCACGAAAAAGTCTGTTATTTCCGTTGCTGTATTAAATCAAACTACAAGCAAGTTTTATCGCTATGTATGGGTGGAGGGTGATCAAAATTGGAGAACTTTAAATTCCATCCCAACAGACACTTGTGACACTTACGGCCTCTGTGGAGTCTATGCAAATTGCATGGTTACACAAGTACAAGTATGCCAATGTTTAAAAGGGTTTAGTCCAAAGTCACCAAAAGCATGGAACTCAACTGAATGGACTCAAGGATGTGACCGGAATAAACCATTAAGCTGCAAAGACAAACTCACAGATGGGTTTGTCAAATATGAAGCAGTGAAAGTTCCAGATACTACACATACTTGGGTGGATGAGACTATGGGCCTAGATGAATGCAGATTCAAGTGCTTGAATAATTGTTCTTGTATGGCTTATACTAATACAAACATAAGAGGAACAGGCAGTGGCTGTGTCATGTGGCTTGGTGATTTAATTGACATTAGACAATATGAACGTGGTGGACAAGATCTATATATTAGGATGCCTGCTTCAGAGTTAGGATCCGACCCTCTGGAACCAGTATATAGTAGGCACAAGAAGAACACGGCAACAGTAGTTGTTTCCACCCTTACTGTGATTTTTGGGGCTCTTTTACTTGGTGCTTATTTTATCCGTAGAATCCGGAGAAACATGGCTGAGAATTCAGTGACAGTGACAGAAGATAAAAATGAAAGACATGTTGATGATTTGGACATCCCCTTGTTTGATTTACCAACAATTTCTGCAGCCACTGATGACTTCTCCATGAAGAATAAGATTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGAATATTAACAGATGGGCAAGAAATTGCTGTAAAGACTCTATCGAGGAGCTCAAGGCAAGGGTTGACAGAGTTCTTGAATGAAGTAAAAGTGATTGCAAAACTTCAGCATCGAAATCTTGTAAGACTTCTTGGTTGTTGCATTCAAGGACAAGAAACAATACTAGTTTATGAGTACATGGCAAATGGCAGCCTAGACTCCTTCATTTTTGATGATACAAAAAGTAAATTGCTAGAGTGGCCTCAGCGCTTTCACATAATATGTGGAATTGCAAGGGGACTTATGTATCTTCACCAAGATTCTCGATTGAGGATTATCCACAGAGATCTCAAAGCAAGTAATGTTCTACTTGATGAAAATCTCAGTCCAAAAATTTCAGATTTTGGAATGGCCAAAACTTTTGGAGGGGATCAAGTGGAAGGAAACACACGGAGAGTAGTTGGGACTTACGGCTATATGGCACCAGAGTATGCTGTTGATGGGTTATTTTCTGTAAAATCTGATGTCTTTAGCTTTGGCATTTTATTGTTGGAGATTTTATGCGGCAAGAGAAATAGAGGAATTTATCACACAGATAAGAGTCTCAACCTCGTTTATCAAGCGTGGACATCATGGAAAGAGGGCAGGGCATTAGAGTTGATTGAATCAAATGTGACGGAGTCATGCAATATGTCAGAAGCGTTACGTTGCCTCCATGTAAGTCTTTTATGTGTGCAGCAGTACCCAGAAGATAGGCCTACAATGGCCTCCGTGATCCTAATGTTGGAGAGTCAAATGGAATTGGTGGAGCCTAAAGAACATGGTTTCATTTCAAGGAAAGCTTCGGTTGATGCTGATTTACGGTCGAATCTGAAGGACACAAGTTCAACCAATGAAGTGACTATTACTTTGTTAGAAGCTCGATGA 5040 0.3891 MAILSFMIMVGYILVPSLKFSIAIDSINMFQSMSDGQTLVSKGGKFELGLFSPNNSTKRYLGIWYKNIPIQTVVWVANGANPINNSFGILTLNSTGNLMLTQNGSIVWSTDSKKQAQNPVATLFHTGNLVVGNEGETNPEAYLWQSFDYPSDTFLPGMKLGWDLRIGLERKITSWRSPNDPSPGDFHRTLALNSYPEFYLMNRTQKFFRFAPWNGLYVSGTIYPRITHSSYTKFVSNKNELFYTYIITNDSILARGVINQTSYSYDRLYWDDSAQTWERTSTFPADICDTYDLCGAYANCIPTESPPCLCLEGFSPKSPQAWNSSDWNEGCVRDKPLHCKDKHSDQFVKYERLKPPDTSHTWLDENIGLEECNDKCLNNCSCKAYANSDIREGGSGCVLWFGDLIDIRQFLADEIDIYIRMSASEIGKDYIFVSNKTIIVTTVAITCGILLLCIYFICRVRKSITERSKTEDNNERHVDELDLSLFDLQTIKTATMNFLIKNKIGEGGFGPVYWGKLADGQEIAVKRLSRSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCIHGQEKLLVYEFMPNGSLDSFIYDHTKGKLLHWSHRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGIAKAVGGDETEGNTNRVAGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGKKNRALCYANHTFNLVGYAWTLWKEGMVSQLIDPSIKQSCIVSEALRCIHVGLLCVQQYPKDRPTMTSVVQMLGSEMEIVEPKEPGFYLNVSNETNLPLNPIGVNSYVELTDVTLDGSTSGEDNWEQIESYSYENCRTLETRDVLSNSVKYSNEKYPKSWNSMDILCFMFMVAGLLVPSSIAIDSISVSQFITDDKTLVSQGGIFELGFFSPGSSNKRYLGIWYKNIPDKKVVWVANREIPINGSSGMLRVNSTGNLVLSQNGSVVWHTKSQKQGKNPMMVLLDSGNLVVKNEGEKNPEDYLWQSFDYLSDTVLQEMKLGWNLKLGIDWRLTSWKSPDDPSRGDLSWALVLNDYPEYYMMKGTEKIFRIGPWNGQYFSGTPGLQPNPIFNFKYVTTKDEIFYSYTLTKKSVISVAVLNQTTSKFYRYVWVEGDQNWRTLNSIPTDTCDTYGLCGVYANCMVTQVQVCQCLKGFSPKSPKAWNSTEWTQGCDRNKPLSCKDKLTDGFVKYEAVKVPDTTHTWVDETMGLDECRFKCLNNCSCMAYTNTNIRGTGSGCVMWLGDLIDIRQYERGGQDLYIRMPASELGSDPLEPVYSRHKKNTATVVVSTLTVIFGALLLGAYFIRRIRRNMAENSVTVTEDKNERHVDDLDIPLFDLPTISAATDDFSMKNKIGEGGFGPVYKGILTDGQEIAVKTLSRSSRQGLTEFLNEVKVIAKLQHRNLVRLLGCCIQGQETILVYEYMANGSLDSFIFDDTKSKLLEWPQRFHIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDENLSPKISDFGMAKTFGGDQVEGNTRRVVGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEILCGKRNRGIYHTDKSLNLVYQAWTSWKEGRALELIESNVTESCNMSEALRCLHVSLLCVQQYPEDRPTMASVILMLESQMELVEPKEHGFISRKASVDADLRSNLKDTSSTNEVTITLLEAR* 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0035 1679 Pfam D-mannose binding lectin 72 176 IPR001480 -
Apr5g0035 1679 Pfam D-mannose binding lectin 928 1031 IPR001480 -
Apr5g0035 1679 Pfam S-locus glycoprotein domain 208 318 IPR000858 GO:0048544
Apr5g0035 1679 Pfam S-locus glycoprotein domain 1063 1173 IPR000858 GO:0048544
Apr5g0035 1679 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Apr5g0035 1679 SMART ntp_6 342 421 IPR003609 -
Apr5g0035 1679 SMART ntp_6 1197 1276 IPR003609 -
Apr5g0035 1679 CDD B_lectin 885 1004 IPR001480 -
Apr5g0035 1679 Gene3D Transferase(Phosphotransferase) domain 1 574 780 - -
Apr5g0035 1679 Gene3D Transferase(Phosphotransferase) domain 1 1438 1651 - -
Apr5g0035 1679 CDD PAN_AP_plant 336 420 - -
Apr5g0035 1679 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0035 1679 SMART blect_4 30 150 IPR001480 -
Apr5g0035 1679 SMART blect_4 885 1005 IPR001480 -
Apr5g0035 1679 PANTHER - 23 807 - -
Apr5g0035 1679 PANTHER - 880 1676 - -
Apr5g0035 1679 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Apr5g0035 1679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Apr5g0035 1679 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 807 - -
Apr5g0035 1679 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 880 1676 - -
Apr5g0035 1679 SUPERFAMILY Protein kinase-like (PK-like) 484 785 IPR011009 -
Apr5g0035 1679 SMART serkin_6 1362 1640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0035 1679 SMART serkin_6 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0035 1679 Gene3D - 876 1002 IPR036426 -
Apr5g0035 1679 Gene3D - 21 147 IPR036426 -
Apr5g0035 1679 CDD STKc_IRAK 1368 1634 - -
Apr5g0035 1679 CDD B_lectin 31 150 IPR001480 -
Apr5g0035 1679 Pfam PAN-like domain 1196 1262 IPR003609 -
Apr5g0035 1679 Pfam PAN-like domain 339 407 IPR003609 -
Apr5g0035 1679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1483 1495 IPR008271 GO:0004672|GO:0006468
Apr5g0035 1679 CDD STKc_IRAK 504 769 - -
Apr5g0035 1679 CDD PAN_AP_plant 1191 1277 - -
Apr5g0035 1679 ProSiteProfiles Bulb-type lectin domain profile. 879 999 IPR001480 -
Apr5g0035 1679 Gene3D Phosphorylase Kinase; domain 1 458 573 - -
Apr5g0035 1679 Gene3D Phosphorylase Kinase; domain 1 1323 1437 - -
Apr5g0035 1679 ProSiteProfiles PAN/Apple domain profile. 1194 1277 IPR003609 -
Apr5g0035 1679 ProSiteProfiles PAN/Apple domain profile. 339 423 IPR003609 -
Apr5g0035 1679 ProSiteProfiles Protein kinase domain profile. 1362 1648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0035 1679 Pfam Protein tyrosine and serine/threonine kinase 500 769 IPR001245 GO:0004672|GO:0006468
Apr5g0035 1679 Pfam Protein tyrosine and serine/threonine kinase 1363 1630 IPR001245 GO:0004672|GO:0006468
Apr5g0035 1679 SUPERFAMILY Protein kinase-like (PK-like) 1346 1634 IPR011009 -
Apr5g0035 1679 SUPERFAMILY alpha-D-mannose-specific plant lectins 928 1036 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0035 Apr-Chr5 288208 302805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0035 435 783 Receptor kinase-like Gene Family AT4G23230 50.992 8.62e-113 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0035 PK_Tyr_Ser-Thr 4.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0035 - - gmx:100812007 2046.94