Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0034 ATGGCCATTATTTCTTTTATGATTATGGTTGCATACATTCTTGTTCCTTCTGTCAAAATTTCCACAGCAATTGATTCTATTGATGTGTTCCAAGGTGTGAGTGATGGAAAGACATTGGTGTCAAAAGGTAGAAAGTTTGAACTTGGTTTCTTCAGTCCCAACAATTCCACCAAACGTTACTTGGGAATTTGGTACAAGAACATCCCAATTCATACAGTTGTTTGGGTTGCCAATGGGGCCAACCCCATCAACAATTCCTTTGGCATATTAACACTAAATAGCACAGGCAATCTCATGCTAACCCAAAATGGGTCTATTGTTTGGTATACAACCTCAGAAAAACAAGCACGGTATCCAGTGGCAACACTTTTGGACAGTGGCAACCTTGTGGTTAGAAATGAAGGAGAAGCAAATTCAGAAGCTTACTTATGGCAAAGCTTTGACTATCCATCTGATACATTTTTGCCAGGAATGAAGTTGGGATGGGACTTTCGAAGTGGTCTTGAAAGGAGAATCACATCCTGGAAGAGTCCAAACGATCCATCTCCTGGACAGTTTTATCGAAGTTTAGTGCCGAATCCTTATCCTGAGTTCTATTTAATGAATGGAACACACAAGTTCCTTCGGTTTGGACCGTGGAATGGCCTATACATTAGTGGCACCGTATATGTAAGGACCAGTCTTTCTACTTCCACAAAATTTGTCTTCAATAAGGATGAATTGTATTACATGTATATCATCAAGAATGATTCTATGCTCACTAGAGTGGTAATAAATCAAACCAGTTATACTCATGATGGCTTCCTTTGGAACGAAGGTGATAACACATGGCACAAAACTTTATCATTTCCAAGGGACTATTGTGACTCTTACGTTCCTTGTGGACCCTTTGGGAATTGCATTGCTACAGAGTCGCCAGCGTGCCAATGCTTAGAAGGATTCAGTCCAAAGTCCCCTCAAGCATGGAACTCATCTGATTGGACTGGAGGATGTGTCCGCAATAAACCATTAAACTGCAAAGACAAACACACTGATGTATTTGTAAAATTTGAAGGGCTCAAACCGCCAGATACTTCGCATACATGGCTAGATGAGAAGATTGGTTTAGAAGAATGCAAAGAAAAGTGCTTGAATAATTGTTCCTGTACAGCATATGCAAATTCAGACATAAGAGGAGGAGGTAGTGGTTGTGTCTTGTGGTTTGGAGATCTCATTGATATTAAACAGTTTTCAGGTGATGAGATAGATCTATATATTCGAATGTCTGCTTCGGTGATAGATTACTCCTTTTCAGGTGATCAAGAGCCTCATAATGGTCGCAAGAAAGTAACAATAGTTGTTACCACTGTAGTTCCAATTTGCGGGATACTTTTGCTTTGTATTTATTTTATCTACAAAGTCCGTAAAAGCATTGCTGGAAAGTCAAAGACAGAAAATAACATGGATGATTTGGATCTCCCGTTGTTTGATCTGCAAACAATTAAGACTGCTACTATGAACTTCTTGATAGAGAATAAGATTGGAGAAGGCGGTTTTGGACCTGTATATTGGGGAAAGCTAGTAGATGGACAAGAAATTGCTGTGAAAAGACTTTCAAGAAACTCAAGACAAGGCATGACCGAGTTCATAAATGAAGTAAAGCTAATTGCAAAACTTCAGCACCGAAATCTAGTAAAGCTCCTAGGTTGTTGCATTCAAGGACAAGAAAAATTGCTAGTTTATGAATACATGCCTAACGGCAGCTTAGACTCCTTTATTTTTGATCATAACAAAGGTACGTTGCTACAGTGGCCTCATCGCTTTCACATAATATTTGGAATTGCTCGAGGACTTTTGTATCTTCATCAAGATTCTCGGTTAAGAATTATCCATAGAGATCTCAAAACAAGTAATGTCCTACTTGATGAGAAGTTGAATCCCAAGATATCAGATTTTGGATTAGCTAAAGCTTTCGGAGGAGATGAGATTGCAGGAAATACAAATAGAGTAGTTGGAACTTATGGATACATGGCACCAGAGTATGCTGTTGATGGGATATTTTCAGATAAATCTGATGTTTTCAGTTATGGTGTCTTATTGTTGGAGGTTATATGTGGGAGCAGAAACAGAGCCCTTTGTCATGAGAATCACACCTTTAACCTTGTTGGTTATGCGTGGACACTTTGGAAAGAGGGCATGGCTTCACAATTGATAGACACAAATATAAAAGAATCATGCATTATTCCAGAAGCATTACGTTGCATTCATATTAGTCTCTTATGTGTGCAACAATATCCAAAAGATAGGCCTACAATGGCTTCAGTGGTTCGAATGTTAGGGAGTGAGATGGAGATAATTGAGCCTAAAGAGCCAGGCTACTATCCGAATGTTTCCGATGAAGCAAATTTACCCTTAAATCAAACTGGAATGAGTGAGTACATCGAATTAACTGATACTACATTAGATGGTAGGTAA 2454 0.3888 MAIISFMIMVAYILVPSVKISTAIDSIDVFQGVSDGKTLVSKGRKFELGFFSPNNSTKRYLGIWYKNIPIHTVVWVANGANPINNSFGILTLNSTGNLMLTQNGSIVWYTTSEKQARYPVATLLDSGNLVVRNEGEANSEAYLWQSFDYPSDTFLPGMKLGWDFRSGLERRITSWKSPNDPSPGQFYRSLVPNPYPEFYLMNGTHKFLRFGPWNGLYISGTVYVRTSLSTSTKFVFNKDELYYMYIIKNDSMLTRVVINQTSYTHDGFLWNEGDNTWHKTLSFPRDYCDSYVPCGPFGNCIATESPACQCLEGFSPKSPQAWNSSDWTGGCVRNKPLNCKDKHTDVFVKFEGLKPPDTSHTWLDEKIGLEECKEKCLNNCSCTAYANSDIRGGGSGCVLWFGDLIDIKQFSGDEIDLYIRMSASVIDYSFSGDQEPHNGRKKVTIVVTTVVPICGILLLCIYFIYKVRKSIAGKSKTENNMDDLDLPLFDLQTIKTATMNFLIENKIGEGGFGPVYWGKLVDGQEIAVKRLSRNSRQGMTEFINEVKLIAKLQHRNLVKLLGCCIQGQEKLLVYEYMPNGSLDSFIFDHNKGTLLQWPHRFHIIFGIARGLLYLHQDSRLRIIHRDLKTSNVLLDEKLNPKISDFGLAKAFGGDEIAGNTNRVVGTYGYMAPEYAVDGIFSDKSDVFSYGVLLLEVICGSRNRALCHENHTFNLVGYAWTLWKEGMASQLIDTNIKESCIIPEALRCIHISLLCVQQYPKDRPTMASVVRMLGSEMEIIEPKEPGYYPNVSDEANLPLNQTGMSEYIELTDTTLDGR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0034 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 816 - -
Apr5g0034 817 Pfam D-mannose binding lectin 72 176 IPR001480 -
Apr5g0034 817 CDD B_lectin 33 150 IPR001480 -
Apr5g0034 817 ProSiteProfiles Protein kinase domain profile. 501 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0034 817 Gene3D - 19 147 IPR036426 -
Apr5g0034 817 Gene3D Phosphorylase Kinase; domain 1 474 576 - -
Apr5g0034 817 Pfam Protein tyrosine and serine/threonine kinase 503 772 IPR001245 GO:0004672|GO:0006468
Apr5g0034 817 SMART blect_4 30 150 IPR001480 -
Apr5g0034 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 816 - -
Apr5g0034 817 CDD PAN_AP_plant 336 420 - -
Apr5g0034 817 Pfam PAN-like domain 339 407 IPR003609 -
Apr5g0034 817 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Apr5g0034 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Apr5g0034 817 CDD STKc_IRAK 507 772 - -
Apr5g0034 817 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Apr5g0034 817 SUPERFAMILY Protein kinase-like (PK-like) 486 797 IPR011009 -
Apr5g0034 817 SMART serkin_6 501 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0034 817 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Apr5g0034 817 SMART ntp_6 342 421 IPR003609 -
Apr5g0034 817 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Apr5g0034 817 PIRSF SRK 1 814 IPR024171 GO:0004674
Apr5g0034 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Apr5g0034 817 Gene3D Transferase(Phosphotransferase) domain 1 577 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0034 Apr-Chr5 282580 286092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0034 431 788 Receptor kinase-like Gene Family AT4G23190 48.787 4.06e-113 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0034 PK_Tyr_Ser-Thr 5.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0034 - - gmx:100802962 1079.7