Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0033 ATGGACTTGCTTTTTCTCGTGATTATGGTTGTTTCTATCATGAGAGTTTCTATAGCAGTTGATTCTATTAATGTGTCCCAGTCCATTAGTGATGACAAGACCTTGGTGTCTCAAGGTGGAACATTTGAGCTTGGTTTCTTCAGCCCAGGTGGTTCTAACAACAGTTACTTGGGTATTTGGTACAAGAACATCCCAGATAAGAAAGTTGTTTGGGTTGCAAATAGGGAAATTCCCATCAATGGTTCCTCAGGTATGTTAACAGTGAACAGCACAGGCAACCTTGTACTTAGCCAAAATGGCACTGTTGTTTGGAATACAACGTCTAGAAAACAAGCACATAATCCAGTGGTGGAGCTTTTGGACAGTGGTAATCTTGTGGTAAGAAACGAGGGAGATGCAAACCCAGATGACTATTTGTGGCAAAGCTTTGACTATCTGTCTGATACAGCATTGCAAGAGATGAAGTTGGGAAGGAACCTTCAACTTGATATACCTTGGACATTAACATCATGGAATAGTCCAGTTGATCCATCCATAGGAGACCTATCTTGGGTTTTACTGTTACATGATTATCCTGAGTATTACATGATGAAGGGAACAGAAAAGTTCTTCAGGATTGGACCTTGGAATGGCCTATATTTTAGTGGAACACCAGGTTTACGACCCAACTCTATCTTTGATTTCAGCTATGTTGCCAATATGGATGAAATTTTCTACACATATACCCTAACAAACAAATCTGTTATTTCCATAGCTGTACTAAACCAAACCACCAATAAGTTTTATCGCTATGTATGGGCAGAGGGTGATCAAAATTGGAGGACTTTAAATTCCATCCCAACAGACAACTGTGACACTTATGGCCTATGTGGAGTCAACAGCAATTGCATGATTACACAAGTACAAATATGCCAATGTTTACAAGGGTTTAATCCAAAGTCACCACAAGCATGGAACTCAACAAATTGGACTCAAGGATGTGTCCGCAATAAACCATTAAGCTGCAAAGACAAACTCACAGATGGGTTTATCAAATATGAAGGAATGAAAGTTCCAGATACTACATATACTTGGGTGGATGAGACTATAGGCCTAGACGAATGCAGAGTCAAGTGCTTGAATAATTGTTCTTGTATGGCTTATACTAATTTAAACATAAGTGGAACAGGTAGTGGCTGTGTCATGTGGCTTAGTGATCTAATTGACATCAGACAATATGAAAATTCTGGGCAAGATCTATATATCCGGATGCCGGCCTCAGAGTTGGGATCTAACCAAGAACCTGGACATGGACACAAGAAGAACACGGCAACAATAGTTGCTACTACCATTGCTGGAATTTGTGTGGTTCTTTTACTATGTACTTATTTCATCTACAGACGCCGGAGAAAAACTGCTGAACAAAACAATGAAAGACATGTGGATGACTTGGATGTCCCATTGTTTGATTTGCCAACAATTACTGCTGCAACCAATGGCTTCTCCTTAAAAAATAAGATTGGAGAAGGTGGTTTTGGACCTGTATACAGGGGAATACTAATGGATGGCCAAGAAATTGCAGTGAAGACTCTATCTAGTAGCTCCGGACAAGGATTGACAGAGTTTCTAAATGAAGTGAAACTGATTGCAAAACTACAACATCGAAATCTTGTGAGACTTCTTGGTTGCTGCATTCAAGGACAACAAAAAATGTTGGTTTATGAATACATGCCAAACACCAGCCTAGACTCCTTCATTTTTGATGGTATAAAATCTAAATTGCTAGAGTGGCCTCAACGCTACCACATAATTGATGGCATTGCGAGGGGGCTTATGTATCTCCATCAAGATTCCCGGTTGAGGATTATCCATAGAGATCTCAAAGCAAGTAATGTTCTACTTGATGAAAATTTGAATCCAAAAATATCGGATTTTGGAAACACAAATAGAGTAGTTGGAACCTATGGGTATATGGCACCAGAGTATGCTGCTGATGGGCTATTTTCAGTGAAATCTGATGTCTTTAGTTTTGGCATTCTAGTGTTGGAGGTTATATGTGGAAGGAGAAATAGAGGACTTTATCATGCAGATGACAGTCTTAACCTTGTTGGCCATGCATGGACAACATGGAAAGAGGGCAAGGCAATAGACTTGATCGACTCAAACATAAAGAAGTCATGCAATGAATCAGAAGTATTGCGTTGCCTCCATGTTAGTCTTTTGTGCGTGCAGCAGTACCCTGAAGACAGGCCTACAATGGCTTCTGTGATTCTAATGTTGGGGAGTGAAATGGAATTGGTGGAGCCAAAAGAACCTGGTTTTGTTACTAGGAATGTTTCAGTTGATACAGATTCACGCTCAAATCAGAAGGATGCAAGTTCAACTAACGAAGTCACCATTTCCTTGTTAGAAGCTCGATGA 2400 0.4 MDLLFLVIMVVSIMRVSIAVDSINVSQSISDDKTLVSQGGTFELGFFSPGGSNNSYLGIWYKNIPDKKVVWVANREIPINGSSGMLTVNSTGNLVLSQNGTVVWNTTSRKQAHNPVVELLDSGNLVVRNEGDANPDDYLWQSFDYLSDTALQEMKLGRNLQLDIPWTLTSWNSPVDPSIGDLSWVLLLHDYPEYYMMKGTEKFFRIGPWNGLYFSGTPGLRPNSIFDFSYVANMDEIFYTYTLTNKSVISIAVLNQTTNKFYRYVWAEGDQNWRTLNSIPTDNCDTYGLCGVNSNCMITQVQICQCLQGFNPKSPQAWNSTNWTQGCVRNKPLSCKDKLTDGFIKYEGMKVPDTTYTWVDETIGLDECRVKCLNNCSCMAYTNLNISGTGSGCVMWLSDLIDIRQYENSGQDLYIRMPASELGSNQEPGHGHKKNTATIVATTIAGICVVLLLCTYFIYRRRRKTAEQNNERHVDDLDVPLFDLPTITAATNGFSLKNKIGEGGFGPVYRGILMDGQEIAVKTLSSSSGQGLTEFLNEVKLIAKLQHRNLVRLLGCCIQGQQKMLVYEYMPNTSLDSFIFDGIKSKLLEWPQRYHIIDGIARGLMYLHQDSRLRIIHRDLKASNVLLDENLNPKISDFGNTNRVVGTYGYMAPEYAADGLFSVKSDVFSFGILVLEVICGRRNRGLYHADDSLNLVGHAWTTWKEGKAIDLIDSNIKKSCNESEVLRCLHVSLLCVQQYPEDRPTMASVILMLGSEMELVEPKEPGFVTRNVSVDTDSRSNQKDASSTNEVTISLLEAR* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0033 799 Gene3D Transferase(Phosphotransferase) domain 1 570 764 - -
Apr5g0033 799 PIRSF SRK 1 799 IPR024171 GO:0004674
Apr5g0033 799 SUPERFAMILY Protein kinase-like (PK-like) 477 753 IPR011009 -
Apr5g0033 799 SMART ntp_6 338 417 IPR003609 -
Apr5g0033 799 ProSiteProfiles Bulb-type lectin domain profile. 20 140 IPR001480 -
Apr5g0033 799 ProSiteProfiles Protein kinase domain profile. 494 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0033 799 Pfam Protein tyrosine and serine/threonine kinase 495 750 IPR001245 GO:0004672|GO:0006468
Apr5g0033 799 Pfam Domain of unknown function (DUF3403) 756 799 IPR021820 GO:0004674
Apr5g0033 799 SMART blect_4 26 146 IPR001480 -
Apr5g0033 799 PANTHER - 23 796 - -
Apr5g0033 799 CDD STKc_IRAK 500 753 - -
Apr5g0033 799 Gene3D Phosphorylase Kinase; domain 1 456 569 - -
Apr5g0033 799 CDD PAN_AP_plant 332 418 - -
Apr5g0033 799 CDD B_lectin 26 145 IPR001480 -
Apr5g0033 799 SMART serkin_6 494 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0033 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 177 IPR036426 -
Apr5g0033 799 Pfam D-mannose binding lectin 69 171 IPR001480 -
Apr5g0033 799 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 796 - -
Apr5g0033 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Apr5g0033 799 Pfam PAN-like domain 337 403 IPR003609 -
Apr5g0033 799 Gene3D - 15 143 IPR036426 -
Apr5g0033 799 Gene3D Hepatocyte Growth Factor 335 415 - -
Apr5g0033 799 Pfam S-locus glycoprotein domain 204 314 IPR000858 GO:0048544
Apr5g0033 799 ProSiteProfiles PAN/Apple domain profile. 335 418 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0033 Apr-Chr5 246154 249664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0033 428 767 Receptor kinase-like Gene Family AT4G23230 51.268 2.60e-118 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0033 PK_Tyr_Ser-Thr 8.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0033 - - gmx:100802962 1112.06