Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0032 ATGGACATTCTATCTTTCATGATTATTATTGTACACATACTTCTTCCTACTTTCAAATTTTCCATAGCAATTAAATCAATCAATGTGTCACAGTCTATCACTGATGGCCAGACCTTAGTGTCCAATGGTGGAGTCTTTGAGCTTGGTTTCTTCAGCCCAGGTAATTCTACTAAACGTTATCTTGGGATTTGGTATAAAAGCATTCCTATTCGAAATGTTGTTTGGGTTGCAAACAGGGAAAATCCAATCAATGATTTCTCAGGCAAATTAAAAGTGAACAGCACAGGAAATCTTGCGTTGAGCCAAAACGGCTCTGTCGTTTGGTACACAACCTCTCAAAAACAAGCACAGAATCCAGTGGTAGAGCTCTTGGATAATGGAAATCTTGTGATAAGAAATGAAGGAGGACCAAACCAAGAACAGTACATTTTGTGGCAAAGCTTTGATTATCCATCTGATACACTCTTGCCAGGGATGAAGTTGGGATGGGATCTTCGAACCAGTTTTGAACGGAGACTAACATCTTGGAAGAGTTCAAATGATCCATCATTAGGAAACTTATCTTGGGTTCTAAAGCTCTATAATTATCCTGAGTTTTATATTATGAAAGGGAAATTGAAGTACATTCGCATTGGACCGTGGAATGGACTTCATTTTAGTGGCTTATCTGATAGAAAACCAAATCCATTATATGATTTCAAGTATGTAGCAAATAATGATGACAACTATGAATCCAATAAGGATGAGATGTTCTATTCATTTTTCTTGAAGAATTCTTCTTTCATTGGTAGTGTCAAAATATCGCCAACCAATCTTTCTATCTATGTATGGATGGAGGATAAGCAGTCATTGATGCCTTATGAAACAATCCCACGTTACTTCTGTGATGTGTATGGCACCTGTGGAGCCAATGGAATATGTACGATTACATATTCTCCAGTATGCGTATGTTTGGAAGGGTTTGTTCCAAAGTCACCAGAAGAATGGGGCATAATGGACTGGAGTAGAGGATGCATCCGCAGTAAATCATTAAGCTGCGACAACTATGATTTGCATGAATTTGTCAAATTTGTAGGTTTGGTAGTACCAGATACATCACAAACTTGGATGGATGAGAATATTGATTTAGCGGAATGCAGACTCAAGTGCTTGAGCAATTGCTCTTGTACAGCATACGCTAATTCAGACATAAGAGGAAAAGGTAGTGGCTGTGTCATATGGTTTGGTGATCTAGTTGACATGAAACAGTTTCAAACAGGTGGGCAAGATCTATATGTTAGGATGCCTGCATCTGAGTTAGAGCCTCTGCCTCAACATGGGCATCACCAAAGAATGAAAAGAATAATTGCCATCACCTTTGCTGCAATTTGTGGGGCGCTTTTACTTTGCATTTATGTCATATACAGAGTTCGGAGGAACATTACTGGTAAATTAAAGTCAAAGACAACAATAGATAACATTGACAGACAACTAGAGGATCTGGATCTGCCGCTGTTTGATCTGCTAACAATCACAATTGCCACTAATAGTTTCTCTCTAAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTATACAAGGGAAAATTACCGGATGGACAAGAAATTGCTGTCAAGAGGCTTTCAAGAACCTCCGGACAAGGAATGCCCGAATTCATCACAGAAGTAAAACTGATTGCGAAACTTCAACACCGAAATCTTGTCAAACTTCTTGGTTGTTGCATTCGAGGACAGGAAAAATTACTAGTATATGAATACATGGTTAATGGAAGCCTAGACTCTTTCATTTTTGATAAAATAAAAGGTAAACTACTAGATTGGCCTCAGCGCTTCCACATTATATTTGGAGTTGCTAGAGGACTTTTGTATCTTCATCAAGATTCACGATTAAGGATTATTCATAGAGATCTCAAAGCGAGTAATGTTTTACTTGATGATCAGTTAAATCCAAAAATATCAGATTTTGGAATGGCTAGAGCTTTTGGAGGAGACCAAACTGAAGGAAACACAAACAGAGTAGTTGGGACATATGGATACATGGCCCCAGAGTATGCTGTTGATGGGCTATTTTCAATCAAATCTGATGTTTTCAGTTTTGGTATTTTATTGTTGGAGATTATATGTGGGAACAAAAATAGAGCTCTTTGTCATGGAAATGAGACTCTTAACCTTGTTGGTTATGCATGGACGCTTTGGAAAGAGGGAAATGCCTTACAATTGATTGACCAAAGCATGAAGGACTCCTGTGTTATCTCTGAAGTGCTCCAATGCATACATGTTAGTCTCTTATGCGTGCAACAATATCCAGAGGATAGGCCTACCATGACCTCAGTAGTTCAAATGTTAGGCAGTGAGAAGGAATTGGTTGAGCCTAAAGAGCCTGGTTTCTTTCCAAGGAGGACTTCTGGTGAAGAAAATTTAAGCTCAAATGAAAAAGAAATGACTTCAAATGATGAATTAACCATTACATCTTTAAATGGTCGGTGA 2487 0.3828 MDILSFMIIIVHILLPTFKFSIAIKSINVSQSITDGQTLVSNGGVFELGFFSPGNSTKRYLGIWYKSIPIRNVVWVANRENPINDFSGKLKVNSTGNLALSQNGSVVWYTTSQKQAQNPVVELLDNGNLVIRNEGGPNQEQYILWQSFDYPSDTLLPGMKLGWDLRTSFERRLTSWKSSNDPSLGNLSWVLKLYNYPEFYIMKGKLKYIRIGPWNGLHFSGLSDRKPNPLYDFKYVANNDDNYESNKDEMFYSFFLKNSSFIGSVKISPTNLSIYVWMEDKQSLMPYETIPRYFCDVYGTCGANGICTITYSPVCVCLEGFVPKSPEEWGIMDWSRGCIRSKSLSCDNYDLHEFVKFVGLVVPDTSQTWMDENIDLAECRLKCLSNCSCTAYANSDIRGKGSGCVIWFGDLVDMKQFQTGGQDLYVRMPASELEPLPQHGHHQRMKRIIAITFAAICGALLLCIYVIYRVRRNITGKLKSKTTIDNIDRQLEDLDLPLFDLLTITIATNSFSLNNKIGQGGFGPVYKGKLPDGQEIAVKRLSRTSGQGMPEFITEVKLIAKLQHRNLVKLLGCCIRGQEKLLVYEYMVNGSLDSFIFDKIKGKLLDWPQRFHIIFGVARGLLYLHQDSRLRIIHRDLKASNVLLDDQLNPKISDFGMARAFGGDQTEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALCHGNETLNLVGYAWTLWKEGNALQLIDQSMKDSCVISEVLQCIHVSLLCVQQYPEDRPTMTSVVQMLGSEKELVEPKEPGFFPRRTSGEENLSSNEKEMTSNDELTITSLNGR* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0032 828 Gene3D - 21 148 IPR036426 -
Apr5g0032 828 CDD STKc_IRAK 517 782 - -
Apr5g0032 828 ProSiteProfiles PAN/Apple domain profile. 346 429 IPR003609 -
Apr5g0032 828 MobiDBLite consensus disorder prediction 802 828 - -
Apr5g0032 828 MobiDBLite consensus disorder prediction 791 828 - -
Apr5g0032 828 Gene3D Transferase(Phosphotransferase) domain 1 587 793 - -
Apr5g0032 828 SUPERFAMILY Protein kinase-like (PK-like) 491 782 IPR011009 -
Apr5g0032 828 Gene3D Phosphorylase Kinase; domain 1 472 586 - -
Apr5g0032 828 CDD PAN_AP_plant 344 429 - -
Apr5g0032 828 SMART ntp_6 349 428 IPR003609 -
Apr5g0032 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Apr5g0032 828 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 827 - -
Apr5g0032 828 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Apr5g0032 828 SMART blect_4 30 151 IPR001480 -
Apr5g0032 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Apr5g0032 828 ProSiteProfiles Protein kinase domain profile. 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0032 828 Pfam S-locus glycoprotein domain 210 325 IPR000858 GO:0048544
Apr5g0032 828 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 827 - -
Apr5g0032 828 CDD B_lectin 30 151 IPR001480 -
Apr5g0032 828 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0032 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Apr5g0032 828 Pfam PAN-like domain 353 414 IPR003609 -
Apr5g0032 828 Pfam Protein tyrosine and serine/threonine kinase 512 782 IPR001245 GO:0004672|GO:0006468
Apr5g0032 828 Pfam D-mannose binding lectin 73 177 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0032 Apr-Chr5 240929 244305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0032 478 828 Receptor kinase-like Gene Family AT3G45860 54.223 2.76e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0032 PK_Tyr_Ser-Thr 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0032 - - gmx:100812007 1207.59