Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0031 ATGAACATTCTTTCTTTCATGATTATTGTTCTAGCAATTAATTCTATAATTGATGGGCATAACCCAAATCAGATACTTTCTTCAGCAATGTCTAGTATTTTATGTGATACATATGAAGCCTGTGGTGCCTTTGGTATTTGCATAAGTACAGGACAAGTGTGTCAATGTTTAAAAGGGTTCAGTCCAAAGTCACCACAAGAATGGAACTCATCAAATTGGGCTAAAGGATGTGTCCGTATTAAACCGTTAAGCTGCTACAATGAATTTAGTTCTGAAACCACAGATGGGTTTATCAAATATGAAGGCCTCAAAGTGCCTGATACAAATCATACTTGGGTGGATGAGCGTATTGATTTAGATTTATGCCGATACATCTGCTTGAAAAATTGTTCTTGTATGGCCTATGCTGTTTCAGACATAAGCTCAGGTAGTGGTTGTGTAATTTGGTTTGGGGATCTAATTGACATCAAACAGTTTCCAACTGGTGGCCAAGATCTATATATTCGGATGGATGCTTCAGAGTTAGGTGAATACTTTGTGAACATTTCTCCTAAGCACTTACATGATTCCTCATATTCACTCTTTCAATTTGAAGATTTATTAACTTTTTTTTCTTTCCATGAAGATTCTCTGGTTCAACGAGGCCACTACAGAAGAGTGAGAACAATAATTGCTTCCACAATTGTGGCAATATGTGTGATACTTTTATTTTGCATTCACATGGTTTGCTGGGTCCGAAAGAACTATGCTGATAAGTCAAAGATAAAAGATAACATTGAAAAATATCTAGAGGATCTGGATCTGCCGTTGTTTGATCTGCAAACAATCACTACTGTCACTAATAATTTTTCATTGAATAATAAGATAGGACAAGGTGGTTTTGGACCTGTATATAAGGGAAAATTACCAGATGGACTAGAAGTTGCTGTCAAGAGACTTTCAAGTAGCTCTAGACAAGGAGTGACCGAGTTCATAACAGAAGTAAAACTGATAGCGGAACTTCAACACCGTAATCTTGTAAAGCTTCTTGGTTGTTGCATTCGAGAACACGAAAAGATATTGGTATATGAATACATGGTTAATGGAAGCTTAGATTCCTTCATTTTTGACCAAATAAAAGGTAAATTGCTGGATTGGCCACGACGCTTCCACATAATATTTGGAGTTGCTAAGGGGCTTTTGTATCTCCATCAAGATTCCCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTCGATGATAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCTAGAGCTTTTGGTGGTGACCAAATAGAAGGAAACACCAATAGAATAGTTGGAACATATGGGTACATGGCTCCAGAGTACGCTGTTGATGGGTTGTTTTCGATCAAATCTGATGTTTTTAGCTTTGGTATTGTATTGCTGGAAATTATATGTGGGATAAAAAATAGAGCTCTTTGTCATGGAAACCAGACTCTTAACCTTGTCGGTTATGCATGGGCACTTTGGAAACAGGGAAATGCTTTACAGTTGATGGACTCAAGGATAAATGACTCTTGCATTATCTCAGAAGTGTTGCGGTGCATCCATGTTAGTCTCTTATGCGTGCAACAATATCCAGAAGATAGGCCTACCATGACCTCAGTAGTTCAAATGTTAGGGAGTGAGATTGAACTGTTTGAACCTAGAGAGCCTGGTTTCTTTCCAAGGAGGACTTGTGATGAAGGAAAGTTAAACTCAAAGAAAAACAACATGATTTCAAATGATGAATTAACCATTACATCTTTAAATGGGAGGTAA 1803 0.3699 MNILSFMIIVLAINSIIDGHNPNQILSSAMSSILCDTYEACGAFGICISTGQVCQCLKGFSPKSPQEWNSSNWAKGCVRIKPLSCYNEFSSETTDGFIKYEGLKVPDTNHTWVDERIDLDLCRYICLKNCSCMAYAVSDISSGSGCVIWFGDLIDIKQFPTGGQDLYIRMDASELGEYFVNISPKHLHDSSYSLFQFEDLLTFFSFHEDSLVQRGHYRRVRTIIASTIVAICVILLFCIHMVCWVRKNYADKSKIKDNIEKYLEDLDLPLFDLQTITTVTNNFSLNNKIGQGGFGPVYKGKLPDGLEVAVKRLSSSSRQGVTEFITEVKLIAELQHRNLVKLLGCCIREHEKILVYEYMVNGSLDSFIFDQIKGKLLDWPRRFHIIFGVAKGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARAFGGDQIEGNTNRIVGTYGYMAPEYAVDGLFSIKSDVFSFGIVLLEIICGIKNRALCHGNQTLNLVGYAWALWKQGNALQLMDSRINDSCIISEVLRCIHVSLLCVQQYPEDRPTMTSVVQMLGSEIELFEPREPGFFPRRTCDEGKLNSKKNNMISNDELTITSLNGR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0031 600 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 26 599 - -
Apr5g0031 600 Gene3D Phosphorylase Kinase; domain 1 244 358 - -
Apr5g0031 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Apr5g0031 600 SMART ntp_6 92 170 IPR003609 -
Apr5g0031 600 CDD STKc_IRAK 289 554 - -
Apr5g0031 600 SMART serkin_6 283 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0031 600 CDD PAN_AP_plant 82 169 - -
Apr5g0031 600 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 599 - -
Apr5g0031 600 ProSiteProfiles PAN/Apple domain profile. 85 171 IPR003609 -
Apr5g0031 600 ProSiteProfiles Protein kinase domain profile. 283 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0031 600 Gene3D Transferase(Phosphotransferase) domain 1 359 561 - -
Apr5g0031 600 Pfam PAN-like domain 91 156 IPR003609 -
Apr5g0031 600 Gene3D Hepatocyte Growth Factor 87 167 - -
Apr5g0031 600 SUPERFAMILY Protein kinase-like (PK-like) 261 554 IPR011009 -
Apr5g0031 600 Pfam S-locus glycoprotein domain 32 64 IPR000858 GO:0048544
Apr5g0031 600 Pfam Protein tyrosine and serine/threonine kinase 284 554 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0031 Apr-Chr5 235213 237712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0031 245 600 Receptor kinase-like Gene Family AT4G23150 52.210 2.52e-123 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0031 PK_Tyr_Ser-Thr 6.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0031 - - aprc:113865072 1227.23