Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr5g0030 | ATGAAGTTTACTCTTTTTTTAATGAGAATCATAGTTTATATACTATTTATCCCTTCCATAATAGTTTCCACACCAGCATACACATCTTCTATTTCTCAATCTCAGTCCCTCAGATATGGAAACACCATAGTTTCCAAACAAGAAACCTTTGAACTTGCCTTTTTTGATCTAGGAAATCCAAACAAAATCTACCTCGGTATTCGGTATAAGAGTATTCAAACTCAAAACGTTGTTTGGGTTGCAAATGGTGGCAACCCAATCAATGACACCACAGCCATCTTGACACTAAACTGCTCTGGCAGTTTGGTCCTCACACACAACAAAATGGTTGTTTGGTTCACGAATTCTCCACAAAAATTGCATAATCCAATAGCGGAGCTATTAGATTCTGGCAATCTTGTGATCAGAGAGAAAAACGAAACAGACTTAGAGAAATTTCTGTGGCAAAGTTTTGACTACCCTTCTAATACAATGTTGGCAGGGATGAAAATTGGATGGGACCTTAAAAGGAAAATAAATAGGAGTCTCGTTGCTTGGAAGAGTGACAATGATCCAACACCAGGAGACTTATATTGGGGTATTATGTTGCATAGTTATCCTGAGATTTATATGATGAGGGGCACAGAGAAATACCATAGACTTGGACCATGGAATGGCATGAGGTTCAGTGGTATGCCAGAAATGAGGCCTAATCCTGTTTTTAATTACACATTTGTCTCCAATAAGGATGAGGTTTATTACATGTGGACACTTCAGACTCATTTAATAACAAAGGCGGTGCTTAATCAAACAAGTCTTGACCGTCCTCGCTATGTGTGGTCAGAGGCTGAAAAACAATGGAACTTTTATTCCACTATGCCAGGAGGAGAATACTGTGACAAGTATGGCGCTTGTGGGGTCAATACATATTGCAGTACTACTGCATCACCGATGTGTGAGTGTTTAAAAGGGTTCAAGGCTAAGTCTCCTCAAAAATGGAACTCAATGGATTGGAAAGACGGCTGTGTCCTCAAACATTCGTTGAATTGCAAAAATGATGGGTTTGTACTATTGCAAGGGTTGAAAGTGCCAGATACTAAATACACATTTGTGGATGAGGCTATTGATCTAGAGCAATGTGCAACCAAGTGCTTGAATGATTGTTCTTGCAAGGCATACACAAATTCTAATATAAGTGGAGCAGGTAGTGGCTGTGTCATGTGGTTCCGCGATCTAATTGACATCAAACAATATCCAGATCCAAACAATGGGCAACCCTTATATATAAAGTTGCCTGCTTCAGAATTAGATTCTGCAAGGCACAAAAGGAACTCTAAAATAATACTTGTTACCTCAGTGGCTGCAGCCTTGGGAATGCTTTTGCTTGGTATTTATTTTGTCTACAGAAGGAACATAGCTGAAAAGTCAGAGGCAGAAAATAACTATGAAAATTATGTGGATGATCTGGATCTCCCATTGCTTGATTTGTCAATAATTATTGCTGCCACTGATAACTTCTCAAAGGAGAAAAAGATTGGGGAAGGCGGTTTTGGACCTGTCTATTGGGGAAAATTAACAAGTGGACTAGAAATTGCTGTGAAGAGGCTTTCAAAGAGCTCAGGACAAGGAATGTCTGAGTTTGTAAATGAAGTCAAATTAATTGCAAAACTTCAACATCGAAATCTTGTGAAGCTTTTAGGCTGTTGCATTCACAAACAAGAAAGAATGTTAGTTTATGAATATATGACTAACGGCAGCCTAGACTATTTCATTTTTGATCCTACCAAAGGAAAATTTCTAGATTGGCCAAAGCGTTTCAACATAATTTGTGGAATTGCTCGGGGGCTTATGTATCTTCATCAAGATTCTCGATTGAGAATTGTCCATAGAGATCTCAAAACAAGTAATATTTTATTAGATGATACTTTGAATCCTAAAATATCAGATTTTGGAATGGCTAGAACTTTCAGAGGAGAGGATATTGAAGGAAATACAAGTAGAATTGTTGGAACATTTGGATACATGGCACCGGAGTATGCAATTGATGGGCAATTTTCTACAAAATCTGATGTCTTCAGCTTTGGTATTTTACTATTGGAGATTATAAGTGGGAAGAAAAATAGAGGAAATCATCGTAGAAATCAATCTCGTAACCTTGTTAGTCGTGCATGGAGATTTTGGAAAACAGGCATGACTTTACAAATTATTGACCCAAACATAGAGGATTCATGTTTTGCATATGAAGTGTTGCGTTGTGTCCATGTTGGACTCTTATGTGTGCAAAAATTCCCAGAAGATCGACCTACAATGACCTCAGTGGTTCTAATGTTAGGGAGTGAGATGGAATTAGATGATCCTAAAGAGCCAGGTTTTTTTACGAAAAATGAATTTACTGAAGGAAATTCAAGTTCAAGTGGGAAAGTTGAAATGACAATAACTTCATTAAGTGCTCGTTCAATGGACAGTGTTTATTTTATGATTTTTGTTGCATGTATACTCGTTCCCTCTCTCAATATTTCCTCAGCAATTAGTTCTCTGAGTGTGTCACAATCTATCAGTGACGGCAATACCTTAGTGTCCAATAGTGGAGCTTTTGAGTTTGGTTTCTTCAGCCCAGGTAGTTCTAAAAAACGTTACCTGGGGATTTGGTTTCACAACATTGCTGTTATAGACGCTGTTTGGGTTGCAAACGCAGCAAACCCAGTTAATGATACCTCAGGCAACTTAACACTCAACAACACAGGCAATCTTGTGCTGAGCCAAAATGGTTCTGTTGTTTGGTATACAATTTCAACCTCTCAAAAATATGCACAGAATCCAGTGCTAGAGCTTTTGGACAGTGGCAATCTTGTGATAAGAAATGAAGGAGAACTAAACCAAGAAAACTTTTTGTGGCAAAGCTTTGATTATCCATCTAATACACTCTTGCCGGGGATGAAGTTGGGATGGGACCTTCGAACTGGTTTGGAACGGAAGATAACGGCATGGAAGAGTGAAGATGATCCCTCACCAGGAGATCTTTCTTGGGGTCTAGTTCTCCATAGATATCCAGAGTTTTATGTGATGAACCGAACAGAAAAGTACTGTCGCGTTGGACCGTGGAATGGTGTTCATTTCAGTGGCTTAGCACTTCAGGAATCAAATCCATTCTATGAGTTAAACTATGTTTCTAAAAACGATCCTATGTATGCGTCTAACAAGGCTGAGATGTTCTACTCTTATGCTGTCAAGAATATTTCTGTCGTTACCAGAGTCAAAATAGTTAAAGACAGTTTTCAAACTCAATTGTGGTTGGAGAGTCTATCAAAATGGAATCTTTATCAGAGCACCCCTATTGATCAGTGTGATATGTATGGAGTCTGTGGAGCATATGGGAATTGCAATATTGAAGAGTCACCACCTTGCCAGTGTTTGAAAGGGTTCAGTCCAAAGTCACCAAGAGAGTGGAATGTAATGAAATGGAGTCAAGGATGCATCCGTGATAAACCGTTAAGCTGCAAAGACAATGGCACGGATGAGTTTGTCAAATATCTAGGCTTGAAAGTTCCTGATACTACACAAACTTGGCTGGATGAGAATATTGATTTAGAGGAATGCAGAGTGAAGTGCTTGAATAATTGTTCTTGTATGGCCTATACTAGTTCAGACATAAGAGGAGGAGGTAGTGGTTGTGTCATGTGGTTTGATGATCTCATTGACATCAAACAGTTTCAAACTGGTGGGCAAGATTTATATATTCGAATGTCTGCTTCGGAGTTAGGTAAAGATTTTATTGATATTTCTTAATAATTCCATCATTCTTCTCAAGGGAGAAAAATAATTGCTACCATAATTGGTGCAACATGCGGGGTACTTTTATTTTGCATTTACGTCATATACAGAGTCAGAAGGAACATTGCTGATAAGTCAAACACAAAAGATGACATTGAAAGACATCTAGAAGATTTGGATCTGCCATTGTTTGATCTGCTAACACTCACTGTGGCCACTAACAATTTCTCGTTGAATAATAAGATTGGACAAGGCGGTTTTGGACCTGTATATAAGGGAAAATTACCAAATGGACAAGAAATAGCTGTTAAGAGACTTTCAAGTAGCTCTGGACAAGGAATGGTCGAGTTCGCAACAGAAGTAAAACTGATTGCAAAACTTCAGCACCGAAATCTTGTGAAGCTTCTTGGTTGTTGCATTCAAGGACGAGAAAAATTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACTCCCTCATATTTGATAAAGTGAATGGTAAATTGTTGGATTGGCCGCAGCGTTTTCACATAATATTTGGAGTTGCTAGGGGACTTTTGTATCTTCATCAAGATTCTCGACTAAGGATTATTCATAGGGATCTCAAAGCCAGTAATGTTTTACTCGATGAGAAGTTAAATGCAAAAATATCAGATTTTGGAATGGCTAGAGCTTTTGGAGGAGACCAGATTGAAGGAAATACAAATAGAGTAGTTGGGACATATGGATACATGGCTCCAGAGTATGCCGTTGATGGGCTGTTTTCAATCAAATCTGACGTTTTCAGCTTTGGTATTTTATTGTTGGAGATTATATGTGGGAACAAAAATAGAGCCCTTTGTCATGGAAACCAGACCCTTAATCTTGTTGGTTATGCATGGACACTATGGAAAGAGGGTAACACTTTACAATTGATAGACCTGAGCATAAAGAACTCCTATGTTGTCTCAGAAGTACTGCGCTGCATCCATGTTAGTCTCTTATGCGTTCAACAATACCCAGATGATAGGCCTACCATGACCTCTGTAGTTCAGATGTTAGGGAGTGAGATGGAATTGTTTGAGCCTAAAGAGCCTGGTTTCTTTCCAAGGAGAATTTCTGATGAAGGAAATTTAAGCTCCAATCAAAATGAAATGTCTTCAAATGATGAATTAACTATTACATCTTTAAATGGCCGGTGA | 4932 | 0.3848 | MKFTLFLMRIIVYILFIPSIIVSTPAYTSSISQSQSLRYGNTIVSKQETFELAFFDLGNPNKIYLGIRYKSIQTQNVVWVANGGNPINDTTAILTLNCSGSLVLTHNKMVVWFTNSPQKLHNPIAELLDSGNLVIREKNETDLEKFLWQSFDYPSNTMLAGMKIGWDLKRKINRSLVAWKSDNDPTPGDLYWGIMLHSYPEIYMMRGTEKYHRLGPWNGMRFSGMPEMRPNPVFNYTFVSNKDEVYYMWTLQTHLITKAVLNQTSLDRPRYVWSEAEKQWNFYSTMPGGEYCDKYGACGVNTYCSTTASPMCECLKGFKAKSPQKWNSMDWKDGCVLKHSLNCKNDGFVLLQGLKVPDTKYTFVDEAIDLEQCATKCLNDCSCKAYTNSNISGAGSGCVMWFRDLIDIKQYPDPNNGQPLYIKLPASELDSARHKRNSKIILVTSVAAALGMLLLGIYFVYRRNIAEKSEAENNYENYVDDLDLPLLDLSIIIAATDNFSKEKKIGEGGFGPVYWGKLTSGLEIAVKRLSKSSGQGMSEFVNEVKLIAKLQHRNLVKLLGCCIHKQERMLVYEYMTNGSLDYFIFDPTKGKFLDWPKRFNIICGIARGLMYLHQDSRLRIVHRDLKTSNILLDDTLNPKISDFGMARTFRGEDIEGNTSRIVGTFGYMAPEYAIDGQFSTKSDVFSFGILLLEIISGKKNRGNHRRNQSRNLVSRAWRFWKTGMTLQIIDPNIEDSCFAYEVLRCVHVGLLCVQKFPEDRPTMTSVVLMLGSEMELDDPKEPGFFTKNEFTEGNSSSSGKVEMTITSLSARSMDSVYFMIFVACILVPSLNISSAISSLSVSQSISDGNTLVSNSGAFEFGFFSPGSSKKRYLGIWFHNIAVIDAVWVANAANPVNDTSGNLTLNNTGNLVLSQNGSVVWYTISTSQKYAQNPVLELLDSGNLVIRNEGELNQENFLWQSFDYPSNTLLPGMKLGWDLRTGLERKITAWKSEDDPSPGDLSWGLVLHRYPEFYVMNRTEKYCRVGPWNGVHFSGLALQESNPFYELNYVSKNDPMYASNKAEMFYSYAVKNISVVTRVKIVKDSFQTQLWLESLSKWNLYQSTPIDQCDMYGVCGAYGNCNIEESPPCQCLKGFSPKSPREWNVMKWSQGCIRDKPLSCKDNGTDEFVKYLGLKVPDTTQTWLDENIDLEECRVKCLNNCSCMAYTSSDIRGGGSGCVMWFDDLIDIKQFQTGGQDLYIRMSASELGKDFIDIS**FHHSSQGRKIIATIIGATCGVLLFCIYVIYRVRRNIADKSNTKDDIERHLEDLDLPLFDLLTLTVATNNFSLNNKIGQGGFGPVYKGKLPNGQEIAVKRLSSSSGQGMVEFATEVKLIAKLQHRNLVKLLGCCIQGREKLLVYEYMVNGSLDSLIFDKVNGKLLDWPQRFHIIFGVARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNAKISDFGMARAFGGDQIEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALCHGNQTLNLVGYAWTLWKEGNTLQLIDLSIKNSYVVSEVLRCIHVSLLCVQQYPDDRPTMTSVVQMLGSEMELFEPKEPGFFPRRISDEGNLSSNQNEMSSNDELTITSLNGR* | 1644 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr5g0030 | 1641 | ProSiteProfiles | Bulb-type lectin domain profile. | 836 | 958 | IPR001480 | - | |
Apr5g0030 | 1641 | Pfam | Protein tyrosine and serine/threonine kinase | 1325 | 1595 | IPR001245 | GO:0004672|GO:0006468 | |
Apr5g0030 | 1641 | Pfam | Protein tyrosine and serine/threonine kinase | 501 | 718 | IPR001245 | GO:0004672|GO:0006468 | |
Apr5g0030 | 1641 | ProSiteProfiles | PAN/Apple domain profile. | 1159 | 1242 | IPR003609 | - | |
Apr5g0030 | 1641 | Gene3D | Phosphorylase Kinase; domain 1 | 461 | 574 | - | - | |
Apr5g0030 | 1641 | Gene3D | Phosphorylase Kinase; domain 1 | 1285 | 1399 | - | - | |
Apr5g0030 | 1641 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1445 | 1457 | IPR008271 | GO:0004672|GO:0006468 | |
Apr5g0030 | 1641 | SMART | blect_4 | 842 | 964 | IPR001480 | - | |
Apr5g0030 | 1641 | SMART | blect_4 | 34 | 154 | IPR001480 | - | |
Apr5g0030 | 1641 | Pfam | S-locus glycoprotein domain | 1023 | 1138 | IPR000858 | GO:0048544 | |
Apr5g0030 | 1641 | Pfam | S-locus glycoprotein domain | 213 | 321 | IPR000858 | GO:0048544 | |
Apr5g0030 | 1641 | Gene3D | Hepatocyte Growth Factor | 1159 | 1240 | - | - | |
Apr5g0030 | 1641 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 845 | 1639 | - | - | |
Apr5g0030 | 1641 | ProSiteProfiles | Bulb-type lectin domain profile. | 28 | 148 | IPR001480 | - | |
Apr5g0030 | 1641 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 620 | 632 | IPR008271 | GO:0004672|GO:0006468 | |
Apr5g0030 | 1641 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 36 | 810 | - | - | |
Apr5g0030 | 1641 | CDD | PAN_AP_plant | 339 | 425 | - | - | |
Apr5g0030 | 1641 | ProSiteProfiles | Protein kinase domain profile. | 1324 | 1602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g0030 | 1641 | CDD | B_lectin | 34 | 154 | IPR001480 | - | |
Apr5g0030 | 1641 | ProSiteProfiles | PAN/Apple domain profile. | 343 | 425 | IPR003609 | - | |
Apr5g0030 | 1641 | CDD | STKc_IRAK | 505 | 770 | - | - | |
Apr5g0030 | 1641 | CDD | STKc_IRAK | 1330 | 1595 | - | - | |
Apr5g0030 | 1641 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 77 | 185 | IPR036426 | - | |
Apr5g0030 | 1641 | SUPERFAMILY | Protein kinase-like (PK-like) | 487 | 777 | IPR011009 | - | |
Apr5g0030 | 1641 | ProSiteProfiles | Protein kinase domain profile. | 499 | 784 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g0030 | 1641 | MobiDBLite | consensus disorder prediction | 1616 | 1641 | - | - | |
Apr5g0030 | 1641 | Gene3D | Transferase(Phosphotransferase) domain 1 | 575 | 781 | - | - | |
Apr5g0030 | 1641 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1400 | 1604 | - | - | |
Apr5g0030 | 1641 | CDD | B_lectin | 847 | 964 | IPR001480 | - | |
Apr5g0030 | 1641 | MobiDBLite | consensus disorder prediction | 1613 | 1641 | - | - | |
Apr5g0030 | 1641 | SUPERFAMILY | Protein kinase-like (PK-like) | 1302 | 1595 | IPR011009 | - | |
Apr5g0030 | 1641 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 885 | 995 | IPR036426 | - | |
Apr5g0030 | 1641 | SMART | ntp_6 | 343 | 424 | IPR003609 | - | |
Apr5g0030 | 1641 | SMART | ntp_6 | 1162 | 1241 | IPR003609 | - | |
Apr5g0030 | 1641 | Gene3D | - | 831 | 961 | IPR036426 | - | |
Apr5g0030 | 1641 | Gene3D | - | 23 | 151 | IPR036426 | - | |
Apr5g0030 | 1641 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 36 | 810 | - | - | |
Apr5g0030 | 1641 | SMART | serkin_6 | 1324 | 1602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g0030 | 1641 | SMART | serkin_6 | 499 | 770 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g0030 | 1641 | Pfam | PAN-like domain | 343 | 408 | IPR003609 | - | |
Apr5g0030 | 1641 | Pfam | PAN-like domain | 1159 | 1227 | IPR003609 | - | |
Apr5g0030 | 1641 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 845 | 1639 | - | - | |
Apr5g0030 | 1641 | CDD | PAN_AP_plant | 1156 | 1240 | - | - | |
Apr5g0030 | 1641 | Pfam | D-mannose binding lectin | 77 | 180 | IPR001480 | - | |
Apr5g0030 | 1641 | Pfam | D-mannose binding lectin | 886 | 990 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr5g0030 | Apr-Chr5 | 219160 | 231525 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr5g0030 | 441 | 784 | Receptor kinase-like Gene Family | AT4G23230 | 55.491 | 4.49e-118 | 384 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Apr5g0030 | PK_Tyr_Ser-Thr | 1.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr5g0030 | - | - | gmx:100812007 | 2066.58 |