Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0030 ATGAAGTTTACTCTTTTTTTAATGAGAATCATAGTTTATATACTATTTATCCCTTCCATAATAGTTTCCACACCAGCATACACATCTTCTATTTCTCAATCTCAGTCCCTCAGATATGGAAACACCATAGTTTCCAAACAAGAAACCTTTGAACTTGCCTTTTTTGATCTAGGAAATCCAAACAAAATCTACCTCGGTATTCGGTATAAGAGTATTCAAACTCAAAACGTTGTTTGGGTTGCAAATGGTGGCAACCCAATCAATGACACCACAGCCATCTTGACACTAAACTGCTCTGGCAGTTTGGTCCTCACACACAACAAAATGGTTGTTTGGTTCACGAATTCTCCACAAAAATTGCATAATCCAATAGCGGAGCTATTAGATTCTGGCAATCTTGTGATCAGAGAGAAAAACGAAACAGACTTAGAGAAATTTCTGTGGCAAAGTTTTGACTACCCTTCTAATACAATGTTGGCAGGGATGAAAATTGGATGGGACCTTAAAAGGAAAATAAATAGGAGTCTCGTTGCTTGGAAGAGTGACAATGATCCAACACCAGGAGACTTATATTGGGGTATTATGTTGCATAGTTATCCTGAGATTTATATGATGAGGGGCACAGAGAAATACCATAGACTTGGACCATGGAATGGCATGAGGTTCAGTGGTATGCCAGAAATGAGGCCTAATCCTGTTTTTAATTACACATTTGTCTCCAATAAGGATGAGGTTTATTACATGTGGACACTTCAGACTCATTTAATAACAAAGGCGGTGCTTAATCAAACAAGTCTTGACCGTCCTCGCTATGTGTGGTCAGAGGCTGAAAAACAATGGAACTTTTATTCCACTATGCCAGGAGGAGAATACTGTGACAAGTATGGCGCTTGTGGGGTCAATACATATTGCAGTACTACTGCATCACCGATGTGTGAGTGTTTAAAAGGGTTCAAGGCTAAGTCTCCTCAAAAATGGAACTCAATGGATTGGAAAGACGGCTGTGTCCTCAAACATTCGTTGAATTGCAAAAATGATGGGTTTGTACTATTGCAAGGGTTGAAAGTGCCAGATACTAAATACACATTTGTGGATGAGGCTATTGATCTAGAGCAATGTGCAACCAAGTGCTTGAATGATTGTTCTTGCAAGGCATACACAAATTCTAATATAAGTGGAGCAGGTAGTGGCTGTGTCATGTGGTTCCGCGATCTAATTGACATCAAACAATATCCAGATCCAAACAATGGGCAACCCTTATATATAAAGTTGCCTGCTTCAGAATTAGATTCTGCAAGGCACAAAAGGAACTCTAAAATAATACTTGTTACCTCAGTGGCTGCAGCCTTGGGAATGCTTTTGCTTGGTATTTATTTTGTCTACAGAAGGAACATAGCTGAAAAGTCAGAGGCAGAAAATAACTATGAAAATTATGTGGATGATCTGGATCTCCCATTGCTTGATTTGTCAATAATTATTGCTGCCACTGATAACTTCTCAAAGGAGAAAAAGATTGGGGAAGGCGGTTTTGGACCTGTCTATTGGGGAAAATTAACAAGTGGACTAGAAATTGCTGTGAAGAGGCTTTCAAAGAGCTCAGGACAAGGAATGTCTGAGTTTGTAAATGAAGTCAAATTAATTGCAAAACTTCAACATCGAAATCTTGTGAAGCTTTTAGGCTGTTGCATTCACAAACAAGAAAGAATGTTAGTTTATGAATATATGACTAACGGCAGCCTAGACTATTTCATTTTTGATCCTACCAAAGGAAAATTTCTAGATTGGCCAAAGCGTTTCAACATAATTTGTGGAATTGCTCGGGGGCTTATGTATCTTCATCAAGATTCTCGATTGAGAATTGTCCATAGAGATCTCAAAACAAGTAATATTTTATTAGATGATACTTTGAATCCTAAAATATCAGATTTTGGAATGGCTAGAACTTTCAGAGGAGAGGATATTGAAGGAAATACAAGTAGAATTGTTGGAACATTTGGATACATGGCACCGGAGTATGCAATTGATGGGCAATTTTCTACAAAATCTGATGTCTTCAGCTTTGGTATTTTACTATTGGAGATTATAAGTGGGAAGAAAAATAGAGGAAATCATCGTAGAAATCAATCTCGTAACCTTGTTAGTCGTGCATGGAGATTTTGGAAAACAGGCATGACTTTACAAATTATTGACCCAAACATAGAGGATTCATGTTTTGCATATGAAGTGTTGCGTTGTGTCCATGTTGGACTCTTATGTGTGCAAAAATTCCCAGAAGATCGACCTACAATGACCTCAGTGGTTCTAATGTTAGGGAGTGAGATGGAATTAGATGATCCTAAAGAGCCAGGTTTTTTTACGAAAAATGAATTTACTGAAGGAAATTCAAGTTCAAGTGGGAAAGTTGAAATGACAATAACTTCATTAAGTGCTCGTTCAATGGACAGTGTTTATTTTATGATTTTTGTTGCATGTATACTCGTTCCCTCTCTCAATATTTCCTCAGCAATTAGTTCTCTGAGTGTGTCACAATCTATCAGTGACGGCAATACCTTAGTGTCCAATAGTGGAGCTTTTGAGTTTGGTTTCTTCAGCCCAGGTAGTTCTAAAAAACGTTACCTGGGGATTTGGTTTCACAACATTGCTGTTATAGACGCTGTTTGGGTTGCAAACGCAGCAAACCCAGTTAATGATACCTCAGGCAACTTAACACTCAACAACACAGGCAATCTTGTGCTGAGCCAAAATGGTTCTGTTGTTTGGTATACAATTTCAACCTCTCAAAAATATGCACAGAATCCAGTGCTAGAGCTTTTGGACAGTGGCAATCTTGTGATAAGAAATGAAGGAGAACTAAACCAAGAAAACTTTTTGTGGCAAAGCTTTGATTATCCATCTAATACACTCTTGCCGGGGATGAAGTTGGGATGGGACCTTCGAACTGGTTTGGAACGGAAGATAACGGCATGGAAGAGTGAAGATGATCCCTCACCAGGAGATCTTTCTTGGGGTCTAGTTCTCCATAGATATCCAGAGTTTTATGTGATGAACCGAACAGAAAAGTACTGTCGCGTTGGACCGTGGAATGGTGTTCATTTCAGTGGCTTAGCACTTCAGGAATCAAATCCATTCTATGAGTTAAACTATGTTTCTAAAAACGATCCTATGTATGCGTCTAACAAGGCTGAGATGTTCTACTCTTATGCTGTCAAGAATATTTCTGTCGTTACCAGAGTCAAAATAGTTAAAGACAGTTTTCAAACTCAATTGTGGTTGGAGAGTCTATCAAAATGGAATCTTTATCAGAGCACCCCTATTGATCAGTGTGATATGTATGGAGTCTGTGGAGCATATGGGAATTGCAATATTGAAGAGTCACCACCTTGCCAGTGTTTGAAAGGGTTCAGTCCAAAGTCACCAAGAGAGTGGAATGTAATGAAATGGAGTCAAGGATGCATCCGTGATAAACCGTTAAGCTGCAAAGACAATGGCACGGATGAGTTTGTCAAATATCTAGGCTTGAAAGTTCCTGATACTACACAAACTTGGCTGGATGAGAATATTGATTTAGAGGAATGCAGAGTGAAGTGCTTGAATAATTGTTCTTGTATGGCCTATACTAGTTCAGACATAAGAGGAGGAGGTAGTGGTTGTGTCATGTGGTTTGATGATCTCATTGACATCAAACAGTTTCAAACTGGTGGGCAAGATTTATATATTCGAATGTCTGCTTCGGAGTTAGGTAAAGATTTTATTGATATTTCTTAATAATTCCATCATTCTTCTCAAGGGAGAAAAATAATTGCTACCATAATTGGTGCAACATGCGGGGTACTTTTATTTTGCATTTACGTCATATACAGAGTCAGAAGGAACATTGCTGATAAGTCAAACACAAAAGATGACATTGAAAGACATCTAGAAGATTTGGATCTGCCATTGTTTGATCTGCTAACACTCACTGTGGCCACTAACAATTTCTCGTTGAATAATAAGATTGGACAAGGCGGTTTTGGACCTGTATATAAGGGAAAATTACCAAATGGACAAGAAATAGCTGTTAAGAGACTTTCAAGTAGCTCTGGACAAGGAATGGTCGAGTTCGCAACAGAAGTAAAACTGATTGCAAAACTTCAGCACCGAAATCTTGTGAAGCTTCTTGGTTGTTGCATTCAAGGACGAGAAAAATTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACTCCCTCATATTTGATAAAGTGAATGGTAAATTGTTGGATTGGCCGCAGCGTTTTCACATAATATTTGGAGTTGCTAGGGGACTTTTGTATCTTCATCAAGATTCTCGACTAAGGATTATTCATAGGGATCTCAAAGCCAGTAATGTTTTACTCGATGAGAAGTTAAATGCAAAAATATCAGATTTTGGAATGGCTAGAGCTTTTGGAGGAGACCAGATTGAAGGAAATACAAATAGAGTAGTTGGGACATATGGATACATGGCTCCAGAGTATGCCGTTGATGGGCTGTTTTCAATCAAATCTGACGTTTTCAGCTTTGGTATTTTATTGTTGGAGATTATATGTGGGAACAAAAATAGAGCCCTTTGTCATGGAAACCAGACCCTTAATCTTGTTGGTTATGCATGGACACTATGGAAAGAGGGTAACACTTTACAATTGATAGACCTGAGCATAAAGAACTCCTATGTTGTCTCAGAAGTACTGCGCTGCATCCATGTTAGTCTCTTATGCGTTCAACAATACCCAGATGATAGGCCTACCATGACCTCTGTAGTTCAGATGTTAGGGAGTGAGATGGAATTGTTTGAGCCTAAAGAGCCTGGTTTCTTTCCAAGGAGAATTTCTGATGAAGGAAATTTAAGCTCCAATCAAAATGAAATGTCTTCAAATGATGAATTAACTATTACATCTTTAAATGGCCGGTGA 4932 0.3848 MKFTLFLMRIIVYILFIPSIIVSTPAYTSSISQSQSLRYGNTIVSKQETFELAFFDLGNPNKIYLGIRYKSIQTQNVVWVANGGNPINDTTAILTLNCSGSLVLTHNKMVVWFTNSPQKLHNPIAELLDSGNLVIREKNETDLEKFLWQSFDYPSNTMLAGMKIGWDLKRKINRSLVAWKSDNDPTPGDLYWGIMLHSYPEIYMMRGTEKYHRLGPWNGMRFSGMPEMRPNPVFNYTFVSNKDEVYYMWTLQTHLITKAVLNQTSLDRPRYVWSEAEKQWNFYSTMPGGEYCDKYGACGVNTYCSTTASPMCECLKGFKAKSPQKWNSMDWKDGCVLKHSLNCKNDGFVLLQGLKVPDTKYTFVDEAIDLEQCATKCLNDCSCKAYTNSNISGAGSGCVMWFRDLIDIKQYPDPNNGQPLYIKLPASELDSARHKRNSKIILVTSVAAALGMLLLGIYFVYRRNIAEKSEAENNYENYVDDLDLPLLDLSIIIAATDNFSKEKKIGEGGFGPVYWGKLTSGLEIAVKRLSKSSGQGMSEFVNEVKLIAKLQHRNLVKLLGCCIHKQERMLVYEYMTNGSLDYFIFDPTKGKFLDWPKRFNIICGIARGLMYLHQDSRLRIVHRDLKTSNILLDDTLNPKISDFGMARTFRGEDIEGNTSRIVGTFGYMAPEYAIDGQFSTKSDVFSFGILLLEIISGKKNRGNHRRNQSRNLVSRAWRFWKTGMTLQIIDPNIEDSCFAYEVLRCVHVGLLCVQKFPEDRPTMTSVVLMLGSEMELDDPKEPGFFTKNEFTEGNSSSSGKVEMTITSLSARSMDSVYFMIFVACILVPSLNISSAISSLSVSQSISDGNTLVSNSGAFEFGFFSPGSSKKRYLGIWFHNIAVIDAVWVANAANPVNDTSGNLTLNNTGNLVLSQNGSVVWYTISTSQKYAQNPVLELLDSGNLVIRNEGELNQENFLWQSFDYPSNTLLPGMKLGWDLRTGLERKITAWKSEDDPSPGDLSWGLVLHRYPEFYVMNRTEKYCRVGPWNGVHFSGLALQESNPFYELNYVSKNDPMYASNKAEMFYSYAVKNISVVTRVKIVKDSFQTQLWLESLSKWNLYQSTPIDQCDMYGVCGAYGNCNIEESPPCQCLKGFSPKSPREWNVMKWSQGCIRDKPLSCKDNGTDEFVKYLGLKVPDTTQTWLDENIDLEECRVKCLNNCSCMAYTSSDIRGGGSGCVMWFDDLIDIKQFQTGGQDLYIRMSASELGKDFIDIS**FHHSSQGRKIIATIIGATCGVLLFCIYVIYRVRRNIADKSNTKDDIERHLEDLDLPLFDLLTLTVATNNFSLNNKIGQGGFGPVYKGKLPNGQEIAVKRLSSSSGQGMVEFATEVKLIAKLQHRNLVKLLGCCIQGREKLLVYEYMVNGSLDSLIFDKVNGKLLDWPQRFHIIFGVARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNAKISDFGMARAFGGDQIEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALCHGNQTLNLVGYAWTLWKEGNTLQLIDLSIKNSYVVSEVLRCIHVSLLCVQQYPDDRPTMTSVVQMLGSEMELFEPKEPGFFPRRISDEGNLSSNQNEMSSNDELTITSLNGR* 1644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0030 1641 ProSiteProfiles Bulb-type lectin domain profile. 836 958 IPR001480 -
Apr5g0030 1641 Pfam Protein tyrosine and serine/threonine kinase 1325 1595 IPR001245 GO:0004672|GO:0006468
Apr5g0030 1641 Pfam Protein tyrosine and serine/threonine kinase 501 718 IPR001245 GO:0004672|GO:0006468
Apr5g0030 1641 ProSiteProfiles PAN/Apple domain profile. 1159 1242 IPR003609 -
Apr5g0030 1641 Gene3D Phosphorylase Kinase; domain 1 461 574 - -
Apr5g0030 1641 Gene3D Phosphorylase Kinase; domain 1 1285 1399 - -
Apr5g0030 1641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1445 1457 IPR008271 GO:0004672|GO:0006468
Apr5g0030 1641 SMART blect_4 842 964 IPR001480 -
Apr5g0030 1641 SMART blect_4 34 154 IPR001480 -
Apr5g0030 1641 Pfam S-locus glycoprotein domain 1023 1138 IPR000858 GO:0048544
Apr5g0030 1641 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544
Apr5g0030 1641 Gene3D Hepatocyte Growth Factor 1159 1240 - -
Apr5g0030 1641 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 845 1639 - -
Apr5g0030 1641 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Apr5g0030 1641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Apr5g0030 1641 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 810 - -
Apr5g0030 1641 CDD PAN_AP_plant 339 425 - -
Apr5g0030 1641 ProSiteProfiles Protein kinase domain profile. 1324 1602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0030 1641 CDD B_lectin 34 154 IPR001480 -
Apr5g0030 1641 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Apr5g0030 1641 CDD STKc_IRAK 505 770 - -
Apr5g0030 1641 CDD STKc_IRAK 1330 1595 - -
Apr5g0030 1641 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Apr5g0030 1641 SUPERFAMILY Protein kinase-like (PK-like) 487 777 IPR011009 -
Apr5g0030 1641 ProSiteProfiles Protein kinase domain profile. 499 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0030 1641 MobiDBLite consensus disorder prediction 1616 1641 - -
Apr5g0030 1641 Gene3D Transferase(Phosphotransferase) domain 1 575 781 - -
Apr5g0030 1641 Gene3D Transferase(Phosphotransferase) domain 1 1400 1604 - -
Apr5g0030 1641 CDD B_lectin 847 964 IPR001480 -
Apr5g0030 1641 MobiDBLite consensus disorder prediction 1613 1641 - -
Apr5g0030 1641 SUPERFAMILY Protein kinase-like (PK-like) 1302 1595 IPR011009 -
Apr5g0030 1641 SUPERFAMILY alpha-D-mannose-specific plant lectins 885 995 IPR036426 -
Apr5g0030 1641 SMART ntp_6 343 424 IPR003609 -
Apr5g0030 1641 SMART ntp_6 1162 1241 IPR003609 -
Apr5g0030 1641 Gene3D - 831 961 IPR036426 -
Apr5g0030 1641 Gene3D - 23 151 IPR036426 -
Apr5g0030 1641 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 36 810 - -
Apr5g0030 1641 SMART serkin_6 1324 1602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0030 1641 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0030 1641 Pfam PAN-like domain 343 408 IPR003609 -
Apr5g0030 1641 Pfam PAN-like domain 1159 1227 IPR003609 -
Apr5g0030 1641 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 845 1639 - -
Apr5g0030 1641 CDD PAN_AP_plant 1156 1240 - -
Apr5g0030 1641 Pfam D-mannose binding lectin 77 180 IPR001480 -
Apr5g0030 1641 Pfam D-mannose binding lectin 886 990 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0030 Apr-Chr5 219160 231525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0030 441 784 Receptor kinase-like Gene Family AT4G23230 55.491 4.49e-118 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0030 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0030 - - gmx:100812007 2066.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0329 2 3934104 3938395 Apr5g0030 5 219160 231525 PCT