Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0010 ATGAAAGAGGAGTCATTAGGATTAATTATTGGGGTTTCCATTGGTGTGGTTATTGGAATTGTTCTGGCAATTTTTGCATTCATCTGCCATAGGTACCATAGGAAGCGTTCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCTTACCCATTCGAACAAATGGTGCTGATTCTTGTACTATTCTATCAGACTCAACCATAGGTCCAGAATCACCCATAAAGTCAGGGAGGAATGGCATGCCCTTTTGGCTTGATGGGTTTAAGAAGAGTAGCATGATCCCAGCATCTGGACTACCAGAATATGCATACAAGGATTTGCAGAAGGCAACACATAATTTTACCACAATCATAGGACAAGGTGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGTGAGACTGTTGCAGTAAAGGTTCTTGCAACTAATTCTAAGCAAGGGGAAAAAGAATTTCACACAGAGGTTATGTTGTTGGGTAGGTTACACCATAGAAATCTGGTGAATTTAGTTGGATATTGTGCAGAAAAGGGGCAACATATGCTTGTATATGTCTACATGAGCAAGGGTAGCTTGGCTTCCCACTTGTATAGTGCTGTGAATGAAGCACTGTCCTGGAATTTGAGGGTTCACGTAGCCTTAGATGTAGCAAGAGGCTTGGAGTACCTTCATGATGGGGCAGTTCCTCCTGTTATCCATAGAGATATCAAATCTTCCAATATTCTGTTGGACCAATCTATGCGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAGGAGATGGTGGATAAACATGCAGCTATTCGAGGTACATTTGGTTATCTTGATCCAGAGTATGTATCTTCAGGGACGTTCACAAAGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGCAGAAACCCCCAGCAGGGTCTTATGGAATACGTTGAGCTTGCCGCAATGAATATCGATGGAAAAGATGGGTGGGAGGAAATTGTGGATTCTCGCCTTGATGGAAACTTTGATGTAAAAGAACTCAATGAAGTGGCATCCCTTGCCTACAAATGCATCAATCATGCCCCAAGAAAACGCCCTTCTATGAGGGACATAGTTCAAGTGTTAACAAGGATCCTTAAGTCAAGTCACCATGGAAATCATCACAAGAACTCCTTATCAGCTTTAACAGATGAAGTTTACATTGATGCTGATCAGCCAGAGACCAAGATTTCTGCTACTGACCATAGAAGAGAAGAATCTATGGATAATACATTTAACATTTATGATCTTTGA 1290 0.4147 MKEESLGLIIGVSIGVVIGIVLAIFAFICHRYHRKRSQIGNSSSRRAATLPIRTNGADSCTILSDSTIGPESPIKSGRNGMPFWLDGFKKSSMIPASGLPEYAYKDLQKATHNFTTIIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSAVNEALSWNLRVHVALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYVSSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNIDGKDGWEEIVDSRLDGNFDVKELNEVASLAYKCINHAPRKRPSMRDIVQVLTRILKSSHHGNHHKNSLSALTDEVYIDADQPETKISATDHRREESMDNTFNIYDL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0010 429 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0010 429 CDD STKc_IRAK 118 377 - -
Apr5g0010 429 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0010 429 Gene3D Transferase(Phosphotransferase) domain 1 188 401 - -
Apr5g0010 429 SUPERFAMILY Protein kinase-like (PK-like) 91 374 IPR011009 -
Apr5g0010 429 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 402 - -
Apr5g0010 429 Gene3D Phosphorylase Kinase; domain 1 87 187 - -
Apr5g0010 429 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Apr5g0010 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Apr5g0010 429 PANTHER OS01G0253100 PROTEIN 5 402 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0010 Apr-Chr5 68574 76955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0010 12 396 Trihelix Transcription Factor Family AT5G38560 36.118 2.84e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Apr5g0010 PK_Tyr_Ser-Thr 4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0010 - - gmx:100786710 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0010 5 68574 76955 Apr5g0010 5 68574 76955 ECH
Apr2g0317 2 3737832 3742240 Apr5g0010 5 68574 76955 PCT