Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0005 ATGGTCACCAAAAACCAGAACCGGGCTCCATTTTCACTCGCATCAACACCACCACCCCCTTCTAAGAACTTTGAGGGTGATGAGCTCTTACTAGATAATATAGCGCAACAAGTTGGAGCCGAGAAAATGGTAGGAACTCCAATTAATGGAAGAACAAGGCAAGCTTTTACAGTTGTGAATGGTGGCCACGATCTTGGCCCAAATAGTACTCCTCCAAGCAATGCTGGATCGGATTATGGTGTCATAGAGTTCACAAGAGAGGATGTAGAAGCATTGTTAAATGAGAAAGCCAAAAGGAAGGACAGATTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTTAAGGTTTGCATCAGGTGGTTCCAAGACCTTGAGATGTACTACTCTCTAGAGCAGGAAAAGTTAAAGAATTCTCTGGAACTGACCCAGCAAAAATGCATAGAAATTGAGTTGCTGCTCAAGATCAAGGAAGAAGAACTAAATTCAATTATTACTGAAATGAGAAGGAATTGCACTTCTTTACAAGAGAAATTGATAAAGGAAGAATCAGAAAAGTCGGTTGCAGTGGAATCTCTTGTTAAAGAGAGAGAGGCTAGGCTTGACATTGAGAGGTCACAGGCTACTCTATCTGAGGACCTCGGAAGAGCTCAACGAGAGATCCAAAGCGCAAATCAGAAGATAGCATCACTCAATGACATGTATAAGCGGTTACAGGATTACATAACAAGTCTACAACAGTACAACGGAAAACTTCATTCAGAGCTTTCATCAGTTGAAGATGAACTTAAACGCGTGGAGAAAGAGAAGGCTACTGCGGTGGAGAACATCACCATGTTAAGGGGTCAACTTACTTTGTCTGTTTCTTCTCAAGAAGAGGCCATAAAACAGAAGGATGTGCTGGCTAGTGAAGTTGCTTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGATGATAGAGATCGCCACTTATCTCAAGTGAAAACTTTAACTACTGAATTAGCAAAATTTAAAGAATCTACGGAAAATTCCTGCACTGAATTGGAAAATTTGACATCAAAAGCAAACGAACTGGAGGCAAAATGTTTTTTGAAAGTAAATCAAATAAAGGCATTGGAAGAAAAGCTAGCAACTGCAGAGAAGAAATTGCAGGTGTCTGATATATGTGCATATGAAACAAGGACAGAATTTGAAGGGCAACAGAAATTTGTCAGTGAGTTAGAAAGACGCTTGGCAGATGCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACACAATACCATTTTGGAGTTAAAAGGGAACATCCGCGTATTTTGTCGAGTGAGGCCTTTGTTACCTGATGAAAGTTGTAGCACAGAAGGCAAGATTTTCAGTTATCCTACATCAATGGAAACTTCTGGAAGAGGCATTGATCTAGCGCAAAATGGCCAAAAGCATTCTTTTACATTTGATAAAGTTTTTACACCAGAAGCCTCACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTTCAAAGCGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAGACCGGGTCAGGGAAAACATATACAATGATGGGCAGGCCTGGACATCCAGAGGAAAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAAACAAAGCAATCTCAGCAGCCTCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACCATTCGTGATTTGATATCTACAAACAGATCATCATCAGATGCAACACGCACAGAGAATGGTACTCCTGGAAAACAATATACAATCAAACATGATGCAAATGGCAATACACAAGTTTCTGATCTTACAGTAGTTGATGTTCAGAGTGCTAGAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAATAGCAGATCAGTGGGAAAAACCCAAATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTCGAATATATGGTGTAAATGAGAGTACTGACCAACAAGTACAAGGTGTTCTGAATCTTATTGATCTTGCCGGGAGCGAACGTCTCTCAAAGAGTGGTTCAACTGGAGACCGGTTGAAAGAAACTCAAGCAATCAACAAAAGTTTGTCATCATTGAGTGATGTTATATTTGCCTTGGCCAAGAAGGAGGACCATGTGCCATTCAGAAACTCAAAGCTTACATATCTACTTCAGCCTTGTCTTGGTGGAGACTCCAAGACACTAATGTTTGTGAACATATCACCGGATCCTTCTTCTGTTGGTGAGTCACTATGCTCACTCAGGTTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACACCGCGTCGCCAAACCAATGGGCGTTCTATAGAGTCTCGCTTGAGCTATTTCTAA 2409 0.4002 MVTKNQNRAPFSLASTPPPPSKNFEGDELLLDNIAQQVGAEKMVGTPINGRTRQAFTVVNGGHDLGPNSTPPSNAGSDYGVIEFTREDVEALLNEKAKRKDRFNYKERCENMVDYIKRLKVCIRWFQDLEMYYSLEQEKLKNSLELTQQKCIEIELLLKIKEEELNSIITEMRRNCTSLQEKLIKEESEKSVAVESLVKEREARLDIERSQATLSEDLGRAQREIQSANQKIASLNDMYKRLQDYITSLQQYNGKLHSELSSVEDELKRVEKEKATAVENITMLRGQLTLSVSSQEEAIKQKDVLASEVASLRGELQQVRDDRDRHLSQVKTLTTELAKFKESTENSCTELENLTSKANELEAKCFLKVNQIKALEEKLATAEKKLQVSDICAYETRTEFEGQQKFVSELERRLADAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCSTEGKIFSYPTSMETSGRGIDLAQNGQKHSFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLISTNRSSSDATRTENGTPGKQYTIKHDANGNTQVSDLTVVDVQSAREVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRSIESRLSYF* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0005 802 Coils Coil 407 427 - -
Apr5g0005 802 CDD KISc_C_terminal 439 783 - -
Apr5g0005 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 779 IPR027417 -
Apr5g0005 802 Gene3D Kinesin motor domain 390 783 IPR036961 -
Apr5g0005 802 Coils Coil 162 189 - -
Apr5g0005 802 Pfam Kinesin motor domain 447 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0005 802 Coils Coil 344 378 - -
Apr5g0005 802 Coils Coil 253 287 - -
Apr5g0005 802 MobiDBLite consensus disorder prediction 1 24 - -
Apr5g0005 802 MobiDBLite consensus disorder prediction 591 613 - -
Apr5g0005 802 PRINTS Kinesin heavy chain signature 517 538 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0005 802 PRINTS Kinesin heavy chain signature 651 668 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0005 802 PRINTS Kinesin heavy chain signature 682 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0005 802 PRINTS Kinesin heavy chain signature 731 752 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0005 802 Coils Coil 302 336 - -
Apr5g0005 802 Coils Coil 82 102 - -
Apr5g0005 802 SMART kinesin_4 439 789 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0005 802 PANTHER KINESIN-LIKE PROTEIN 27 801 - -
Apr5g0005 802 Coils Coil 211 245 - -
Apr5g0005 802 ProSiteProfiles Kinesin motor domain profile. 441 781 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g0005 802 ProSitePatterns Kinesin motor domain signature. 681 692 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr5g0005 802 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0005 Apr-Chr5 28785 34688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0005 413 795 Calmodulin-binding Proteins AT5G65930 38.903 1.15e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0005 K10405 - gmx:100784221 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0005 5 28785 34688 Apr5g0005 5 28785 34688 ECH
Apr2g1810 2 23732944 23738678 Apr5g0005 5 28785 34688 PCT