Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2805 ATGGGTTGCTTTTCGTGTTTCTCGAGTTCGAGGGAGGATCACAACCTCAATCCAAGGCACCGCCAACCCAATCCACCTATACCTTCTCAAATTTCCAGATTGCCCTCTGGAGCAGAAAAGTTACGGTCTAGAAGCAATGGAGGTTCCAAAAGGGAACTGCCTGCTCCCAAGGATGGACCTGCTGTCCAAATTGCTGCTCAAACTTTTACTTTCCGTGAACTTGCAGCTGCAACCAAAAACTTCAGGCCAGACTCCTTTGTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAAGGGAGGCTCGAAAGCACTGGTCAGATAGTTGCTGTTAAACAGTTAGACAAAAATGGTCTTCAGGGGAATAGAGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTACATCACCCTAACCTTGTGAATCTCATCGGATACTGTGCAGATGGGGATCAGCGCCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGATCACCTTCACTATCTTCCCCCTGATAAGGAACCACTAGATTGGAACACTAGGATGAAAATAGCTGCGGGTGCTGCAAAAGGATTAGAATACCTGCATGATAAGGCAAATCCTCCTGTCATTTATAGAGACTTCAAGTCATCTAACATATTACTTGATGAAGGATACCACCCAAAGCTTTCTGACTTTGGTCTTGCAAAACTTGGTCCTGTTGGTGACAAATCACATGTTTCTACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCAATGACTGGTCAACTAACTGTGAAGTCAGATGTATATAGTTTTGGGGTGGTCTTCTTAGAGCTGATCACTGGCCGTAAAGCAATTGACAGCAGCCAGCCCCAAGGAGAACAAAACCTTGTCACATGGGCACGTCCATTGTTTAATGACCGCAAGAAGTTTTCAAAGTTGGCTGATCCAAATATGCAGGGACGGTTTCCCATGCGGGGTCTTTACCAGGCTCTGGCTGTGGCTTCAATGTGCATTCAAGAATCAGCTGCCACTCGTCCTTTGATTGGAGATGTGGTGACAGCCCTCTCATATCTGGCCAACCAAGCATATGACCCCAGCAATGCTGGGCATGGTCATAGAGGGTCTAGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATATTGAAAAATGATGAAGCAGGAGGATCTGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCGAGGATATTAAACAGAGATCTAGATAGAGAACGTGCTGTTGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGACAAAAAAGGAAACAACAAAGTGTGCAGCAGGCCAATTTGGATGATTCTAGCACTTATTAG 1383 0.457 MGCFSCFSSSREDHNLNPRHRQPNPPIPSQISRLPSGAEKLRSRSNGGSKRELPAPKDGPAVQIAAQTFTFRELAAATKNFRPDSFVGEGGFGRVYKGRLESTGQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHYLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSSQPQGEQNLVTWARPLFNDRKKFSKLADPNMQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPSNAGHGHRGSSDDKRNRDDKGGRILKNDEAGGSGRRWDLEGSEKDDSPRETARILNRDLDRERAVAEAKMWGENLRQKRKQQSVQQANLDDSSTY* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2805 460 MobiDBLite consensus disorder prediction 363 424 - -
Apr4g2805 460 Gene3D Transferase(Phosphotransferase) domain 1 158 374 - -
Apr4g2805 460 MobiDBLite consensus disorder prediction 439 460 - -
Apr4g2805 460 CDD STKc_IRAK 87 355 - -
Apr4g2805 460 SUPERFAMILY Protein kinase-like (PK-like) 66 353 IPR011009 -
Apr4g2805 460 Pfam Protein kinase domain 85 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2805 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Apr4g2805 460 MobiDBLite consensus disorder prediction 371 424 - -
Apr4g2805 460 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Apr4g2805 460 ProSiteProfiles Protein kinase domain profile. 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2805 460 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 450 - -
Apr4g2805 460 PANTHER OS07G0668900 PROTEIN 1 450 - -
Apr4g2805 460 MobiDBLite consensus disorder prediction 1 59 - -
Apr4g2805 460 Gene3D Phosphorylase Kinase; domain 1 65 157 - -
Apr4g2805 460 MobiDBLite consensus disorder prediction 442 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2805 Apr-Chr4 36582795 36587496 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2805 1 437 Glycoside Hydrolase AT3G07070 56.600 1.07e-165 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr4g2805 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2805 K13430 - gmx:100305422 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2805 4 36582795 36587496 Apr4g2805 4 36582795 36587496 ECH