Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2804 ATGGAGGACGCTAGGAGGAGCAAGAATAATAAAAAAGGAGGGCTCATAACAAGAACATGGGAGCGATGCAAGTCCATGTCCATAGGGCGAGGGCGCAAGGCAATTGCTGATTCGCTCACACTGAGAACAACAACAATAAGGAGCAAATCATGGCCAAATGCAAAGGATAGTGCAAGTGTGGCCCCCCAAGGTTGCTTCTCCGTCTACGTGGGACCTCAAATGCAGAGGTTCGTCATCAAAACTGAGTACGCAAACCATCCTTTGTTCAAGATGTTGCTTGAAGAAGCAGAATCTGAATATGGTTATAACAGCCAAGGCCCTTTAGCCCTTCCTTGTGACGTTCACATCTTCTACAAAGTATTGATGGAAATGGACTGCCAACAAACTCCTCAGGGCTGCGCTTTTCTCAAACGTTCTTCCTCTTCTTATCATCTTCTTACCCCTCCCCCCATGCTTTCCATTAACCCCTTTTGA 474 0.4662 MEDARRSKNNKKGGLITRTWERCKSMSIGRGRKAIADSLTLRTTTIRSKSWPNAKDSASVAPQGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYNSQGPLALPCDVHIFYKVLMEMDCQQTPQGCAFLKRSSSSYHLLTPPPMLSINPF* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2804 157 Pfam Auxin responsive protein 29 121 IPR003676 GO:0009733
Apr4g2804 157 PANTHER OS02G0305950 PROTEIN 12 136 - -
Apr4g2804 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2804 Apr-Chr4 36578712 36579529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2804 61 121 Calmodulin-binding Proteins AT3G43120 49.180 2.71e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2804 K14488 - gmx:100777217 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2804 4 36578712 36579529 Apr4g2804 4 36578712 36579529 ECH