Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2802 ATGCTCAGTCTTCTACATCACCCTAACCTTGTGAATCTCATCGGATACTGTGCAGATGGGGATCAGCGCCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGATCACCTTCACTATCTTCCCCCTGATAAGGAACCACTAGATTGGAACACTAGGATGAAAATAGCTGCGGGTGCTGCAAAAGGATTAGAATACCTGCATGATAAGGCAAATCCTCCTGTCATTTATAGAGACTTCAAGTCATCTAACATATTACTTGATGAAGGATACCACCCAAAGCTTTCTGACTTTGGTCTTGCAAAACTTGGTCCTGTTGGTGACAAATCACATGTTTCTACACGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTACGCAATGACTGGTCAACTAACTGTGAAGTCAGATGTATATAGTTTTGGGGTGGTCTTCTTAGAGCTGATCACTGGCCGTAAAGCAATTGACAGCAGCCAGCCCCATGGAGAACAAAACCTTGTCACATGGGCACGTCCATTGTTTAATGACCGCAGGAAGTTTTCAAAGTTGGCTGATCCAAATATGCAGGGACGGTTTCCCATGCGGGGTCTTTACCAGGCTCTGGCTGTGGCTTCAATGTGCATTCAAGAATCGGCTGCCACTCGTCCTCTGATTGGAGATGTGGTGACAGCCCTCTCATATCTGGCCAACCAAGCATATGACCCCAGCAATGCTGGGCATGGTCATAGAGGGTCTAGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATATTGAAAAATGATGAAGCAGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCCGAGAAAGATGACTCCGCACGAGAATATTTATTAAGCAGAAGTCCAAGAAACAAAACAAAACTAGGCTACCAGCCTAGACCTCAAGATCCCTAA 930 0.4505 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHYLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSSQPHGEQNLVTWARPLFNDRRKFSKLADPNMQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPSNAGHGHRGSSDDKRNRDDKGGRILKNDEAGGSGRRWDLEGSEKDDSAREYLLSRSPRNKTKLGYQPRPQDP* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2802 309 MobiDBLite consensus disorder prediction 235 309 - -
Apr4g2802 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Apr4g2802 309 MobiDBLite consensus disorder prediction 243 293 - -
Apr4g2802 309 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Apr4g2802 309 Gene3D Transferase(Phosphotransferase) domain 1 31 247 - -
Apr4g2802 309 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2802 309 Pfam Protein kinase domain 2 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2802 309 PANTHER OS07G0668900 PROTEIN 1 276 - -
Apr4g2802 309 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 276 - -
Apr4g2802 309 SUPERFAMILY Protein kinase-like (PK-like) 2 227 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2802 Apr-Chr4 36533834 36536243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2802 1 230 Glycoside Hydrolase AT3G07070 72.609 1.41e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr4g2802 Pkinase 4.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2802 K13430 - gmx:100305422 547.74