Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2797 ATGAGAGCTATAAGACACCACCTTTCACCGCTGAATTCCAGGATCACTCGCCCACCATCTCTTTTTTCTTTAACAAATATCATGTCAGAATCTCATCATTCCCCTGCTTTCAACACACCCAGATTGGTCCTCAAGAAGGTTTTGGCCAAATCTCAACATGAAGGCGATGGAGCTGTTGTTAGAAGAGGCATTGGAAGAAGCGAGTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCCGGAGGATTCCCTGATCATCCACACAGAGGTTTTGAGACAGTCACCTACATGCTAGAGGGAGGCATAACTCACCAAGATTTTGCTGGGCACGAGGGCACAATAAGAACTGGTGATGTTCAGTGGATGACCGCAGGCAGGGGAATAATTCACTCTGAAATGCCTGCAGAAGCAAACAACAAAGGATTGCAACTATGGATCAATTTAGCAGCCAAGGACAAAATGATTGAACCTAATTATCAAGAACTTCCAAGTGAGAACATACCAACAGCAGAAAAAGATGGGGTTGAGGTGAGAGTGATAGCAGGAGGAGCAATGGGGGTTCATTCGCCTGTCTACACCAGAACTCCAACCATGTTCCTTGATTTCTCTATGATGCCCTCAACTCAGTGGCATCAGAGTATTCCAGAGTCGTGGAATTCCTTTGTTTATGTGATTGAAGGAGAAGGAGATTTTGGGTCTCCAAGTTCATCACCGGTTATGGCACACCATGTCTTGGTTTTGACTCAAGGTGATGGCCTTAGCGTCTGGAATAACTCTTCAAAGCCTTTGAGGTTTGTGCTTATTGGAGGACACCCACTTAACGAGCCTGTGGCTCAGTATGGGCCTTTTGTCATGAACACGCAGTCAGAAATTGAGAAAACTATTGAAGACTATCACTATGGCAAGAACGGATTTGAGATGCGGAAATATTGGCGATCTCAATAG 963 0.4507 MRAIRHHLSPLNSRITRPPSLFSLTNIMSESHHSPAFNTPRLVLKKVLAKSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPGGFPDHPHRGFETVTYMLEGGITHQDFAGHEGTIRTGDVQWMTAGRGIIHSEMPAEANNKGLQLWINLAAKDKMIEPNYQELPSENIPTAEKDGVEVRVIAGGAMGVHSPVYTRTPTMFLDFSMMPSTQWHQSIPESWNSFVYVIEGEGDFGSPSSSPVMAHHVLVLTQGDGLSVWNNSSKPLRFVLIGGHPLNEPVAQYGPFVMNTQSEIEKTIEDYHYGKNGFEMRKYWRSQ* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2797 320 PANTHER PIRIN-RELATED 31 320 IPR012093 -
Apr4g2797 320 SUPERFAMILY RmlC-like cupins 41 318 IPR011051 -
Apr4g2797 320 PANTHER PIRIN-LIKE PROTEIN 31 320 - -
Apr4g2797 320 Pfam Pirin C-terminal cupin domain 205 310 IPR008778 -
Apr4g2797 320 Pfam Pirin 61 152 IPR003829 -
Apr4g2797 320 CDD cupin_pirin_C 202 278 - -
Apr4g2797 320 PIRSF Pirin 39 318 IPR012093 -
Apr4g2797 320 Gene3D Jelly Rolls 174 279 IPR014710 -
Apr4g2797 320 Gene3D Jelly Rolls 54 305 IPR014710 -
Apr4g2797 320 CDD cupin_pirin_N 58 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2797 Apr-Chr4 36497193 36499054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2797 38 315 Calmodulin-binding Proteins AT3G59220 63.571 9.84e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2797 K06911 - gmx:100775597 571.237