LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr4g2794	ATGGGCTGGCCAGCAATCCGACTCTGCTCTGCTCTGTCAGGTGTAGGGGAAGGACAACATATACGTACATACAAGAGGAAGCTTTCCATTTTCTTTCTCGACCATTCCAATACTCTGTTTTTCTGCGTAAGAGAGGAGCTTTACTCTGTTTTTCTGCGTAAGAGAAGAGCTCAACATGCCATTCACCGCCACTCTGGGAGCTGGGTTGAACGTATGGATGGGAAAGTTTTATCTATAGTAGGAGTTTACGTTGGATGGATAGTCCCCGTCATTATCACGTTCCATGAGGAGCGTTATCCTTGGTTAAAGTGGACCAACGGTTTTGTTGGAGGATTCCTTTACCTGGATGTAATGATTAAATTTAACACAGCATACATGGACAAAAACACCCGTTTGTTAGTTTTCCATCGTCGCATGGTTGTTCTTACTTATCTGAAATCTTGGTTTTTTTTCGACTTCATCTCTGCCTCTGCTGCTGTTACTAGCGCCTCTGTACCAGTCTTCTCGAGGTTGAAAGTTGAGTCTTTTCCACCGCAAGAAGATATAATACTACGTAATGAGATGCCTGAGACCTTCTTCATACTAGTCGATGGTGATGTGGTAGGTTTGGAAATTGTGATAACCCAAGCTAATGGAACTAAAACAACCGTGACAGAAACCATAGCTCCTGGTTACATTTGTGGCGATATTGGTGTGTTGTTGAACAGGCTGCAGCCTTTTACTATTAGAACAACGGTAACGACCACTTTATTGAAGGTAAAGAGTAAACGTTTCTTAAAATTCATTCAATCCTACTTGGAAGATGCAGAGAACTTATCAGCAAGGGAAACCATAAAGGAAAGTATACTGGATATGGATGGAAAGTTAACTTGTGGTAAGATGGACCTACCGTTGAGTCTTTGTTGTGCTGCATCTATGGGATATGATTCATTATTAGAACAATTGCTGAAATGGGGCTGGGATAAAGATAAATTGGACGAGAGAGGAGACACAGCTTTAAATGCAGCAGCCTCAAAAGGAAACATGAATTGTGTCAGTACTTTGTTGACACACGGAGCTGATCCGAACCTCAGAGATGCTCATGGTAACGTACCCTTGTGGGGAGCTCTGATGGGTGGACATGCACTTGTGCAAGAACTCTTGTCTAGTGCCGGAGCTAACTTGCAAAATGGTGACCTCGGTCAATATAAAGAAAATGCAAGTGGAAATAGAAATTTGTTGATAGCCATAGCTGCTGAGATTAGCCGTAGACATAGTTATGACAATTCTAATCTTGCAGATCAATGA	1287	0.4219	MGWPAIRLCSALSGVGEGQHIRTYKRKLSIFFLDHSNTLFFCVREELYSVFLRKRRAQHAIHRHSGSWVERMDGKVLSIVGVYVGWIVPVIITFHEERYPWLKWTNGFVGGFLYLDVMIKFNTAYMDKNTRLLVFHRRMVVLTYLKSWFFFDFISASAAVTSASVPVFSRLKVESFPPQEDIILRNEMPETFFILVDGDVVGLEIVITQANGTKTTVTETIAPGYICGDIGVLLNRLQPFTIRTTVTTTLLKVKSKRFLKFIQSYLEDAENLSARETIKESILDMDGKLTCGKMDLPLSLCCAASMGYDSLLEQLLKWGWDKDKLDERGDTALNAAASKGNMNCVSTLLTHGADPNLRDAHGNVPLWGALMGGHALVQELLSSAGANLQNGDLGQYKENASGNRNLLIAIAAEISRRHSYDNSNLADQ*	429

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr4g2794	428	Pfam	Cyclic nucleotide-binding domain	174	265	IPR000595	-
	Apr4g2794	428	ProSiteProfiles	cAMP/cGMP binding motif profile.	167	262	IPR000595	-
	Apr4g2794	428	CDD	CAP_ED	167	243	IPR000595	-
	Apr4g2794	428	ProSiteProfiles	Ankyrin repeat profile.	328	360	IPR002110	GO:0005515
	Apr4g2794	428	Pfam	Ankyrin repeats (3 copies)	302	389	IPR002110	GO:0005515
	Apr4g2794	428	Gene3D	-	296	424	IPR036770	-
	Apr4g2794	428	SMART	ANK_2a	328	357	IPR002110	GO:0005515
	Apr4g2794	428	SMART	ANK_2a	361	390	IPR002110	GO:0005515
	Apr4g2794	428	SMART	ANK_2a	295	324	IPR002110	GO:0005515
	Apr4g2794	428	ProSiteProfiles	Ankyrin repeat region circular profile.	328	359	-	-
	Apr4g2794	428	PANTHER	K+ TRANSPORTER 1-RELATED	76	157	-	-
	Apr4g2794	428	PANTHER	K+ TRANSPORTER 1-RELATED	168	406	-	-
	Apr4g2794	428	PANTHER	POTASSIUM CHANNEL AKT1	76	157	IPR045319	GO:0005249\|GO:0006813
	Apr4g2794	428	PANTHER	POTASSIUM CHANNEL AKT1	168	406	IPR045319	GO:0005249\|GO:0006813
	Apr4g2794	428	SUPERFAMILY	Ankyrin repeat	299	392	IPR036770	-
	Apr4g2794	428	SUPERFAMILY	cAMP-binding domain-like	167	272	IPR018490	-
	Apr4g2794	428	Gene3D	Jelly Rolls	150	287	IPR014710	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr4g2794	Apr-Chr4	36471367	36474364	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr4g2794	169	406	Ion Channels	AT4G32500	43.548	1.14e-51	184

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr4g2794	K21867		-	aprc:113862609	848.58