Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2789 ATGCCGGAGCTTCGTAGTGGACCGCGACGACGTCGTGCTCCGGTAGGTCGTAGAAGCTCCGAACCACCGTCTCCGGCGGGAAAATACGTCAAGACTCGTGCTGCAGTCGCCAGGGAGGCAGCGGCGGCGGCAGAGAGGCCGAGGACTCGGTTGGCAACGAAGAAATTGGAACAGGAAAAGCCGGTGATCGTGATATCGGAGCCTGACAGCCACACGAAGAAGGATAAGGAAGAAATTGAAGGCGCGATGGGCGATGATAGTGGCGGTTTGAGTGCTAACAAAGGCGTTGCTCAAGAAGATGATACCAACGCTGCTCCTTTTCCCGAGAGGGTTCAAGTAGGAGGATCACCTGTGTACAAAGTGGAGAGAAAGCTGGGTAAAGGTGGGTTTGGACAGGTTTTTGTTGGCCGTCGAGTTACCGGTGGTAATGACCGTGCTTCTGGTCCTGGCGCCACTGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAAGGCTGTAACTATGGCCCTCCTTATGAGTGGCAAGTGTACAACACCCTTGGTGGCAGTCATGGAATACCTAAAGTACATTATAAAGGGAGACAAGGAGAATATTACGTAATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGACGTATGGAATTCCTCCAGCCAGGCGATGTCTGCGGAAATGGTTGCATGTATTGCTGTTGAGTCCCTGTCAATCCTGGAGAAGATGCACTCAAGAGGATATGTGCATGGAGATGTAAAACCAGAGAACTTTTTATTAGGTCAGCCAGCGACACCACAAGAGAAGAAATTGTTTCTTGTAGACCTTGGATTAGCAACAAAGTGGAGAGACAGCTCCAGTGGGCAGCATGTGGATTATGATCAACGCCCTGATATGTTTAGAGGGACTGTTCGATATGCCAGTGTTCATGCACATTTGGGAAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCGTATACACTCATCTTCCTTCATAAAGGCCGGTTACCTTGGCAAGGTTATCAGGGTGATAACAAATCCTTTCTTGTTTGCAAAAAGAAGATGGGAACATCCCCTGAAATGCTATGCTGTTTCTGTCCTCCTCCTTTTAGACATTTCCTTGAGATTGTAGTGAACATGAAATTCGATGAAGAACCTAATTATTCGAAGCTAATATCTTTGTTTGATGGTATGCTTGGACCGAATCCTGCATTGCGGCCAATTAATACTGAAGGTGCTCAAAAGGTTGGGCAAAAGAGGGGTAGATTGAACATTGAGGAAGAGGATGATTCACAGCCCAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATTTCAGTTTATAATGCAAGACTACCAATGAAGCAAAGGTATCATTACAATGTAGCGGATACAAGATTAGCACAGCATGTGGAGAGAGGGATTGCAGATGGCCTTCTTATTAGTTGTGTGGCTTCTTGTTCCAATCTGTGGGCACTTATTATGGATGCTGGAACTGGTTTTACAACTCAAGTTTATAAGTTGTCACCATTTTTCTTACACAAGGAATGGATTATGGAGCAGTGGGAGAAGAACTATTACATAACTTCTATTGCTGGAGCTAATAATGGAAGCTCTCTTGTGGTGATGTCAAAAGGCACACAGTATACGCAACAATCATACAAAGTAAGTGATTCATTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGGTTTCATGTGACCTCAATGGCCACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGAAATGCTGGATTCAGTGATCAGGTTGTTGAACTAGATTTTCTCTATCCTAGTGAGGGAATCCACAGACGTTGGGATAATGGGTACAGGATTACAGCAACTGCTGCTACATGGGATCAATCTGCTCTTATATTAAGCATTCCAAGGCGCAGGCCAGGAGATGAAACCCAGGAAACTCTGCGTACGTCTCAATTTCCTAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCTTGTTTGTGCTATGGGCGCACAGTATGCTGA 2046 0.4565 MPELRSGPRRRRAPVGRRSSEPPSPAGKYVKTRAAVAREAAAAAERPRTRLATKKLEQEKPVIVISEPDSHTKKDKEEIEGAMGDDSGGLSANKGVAQEDDTNAAPFPERVQVGGSPVYKVERKLGKGGFGQVFVGRRVTGGNDRASGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQAMSAEMVACIAVESLSILEKMHSRGYVHGDVKPENFLLGQPATPQEKKLFLVDLGLATKWRDSSSGQHVDYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMLCCFCPPPFRHFLEIVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISVYNARLPMKQRYHYNVADTRLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFTTQVYKLSPFFLHKEWIMEQWEKNYYITSIAGANNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2789 681 MobiDBLite consensus disorder prediction 1 75 - -
Apr4g2789 681 Pfam Protein kinase domain 119 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2789 681 ProSitePatterns Protein kinases ATP-binding region signature. 125 157 IPR017441 GO:0005524
Apr4g2789 681 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 75 652 - -
Apr4g2789 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Apr4g2789 681 CDD STKc_CK1 119 394 - -
Apr4g2789 681 Gene3D Transferase(Phosphotransferase) domain 1 91 438 - -
Apr4g2789 681 SMART serkin_6 119 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2789 681 SUPERFAMILY Protein kinase-like (PK-like) 119 402 IPR011009 -
Apr4g2789 681 MobiDBLite consensus disorder prediction 43 75 - -
Apr4g2789 681 PANTHER CASEIN KINASE-RELATED 75 652 - -
Apr4g2789 681 ProSiteProfiles Protein kinase domain profile. 119 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2789 681 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2789 Apr-Chr4 36408921 36415401 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2789 118 280 EF-hand Containing Proteins AT4G35310 26.946 4.62e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Apr4g2789 Pkinase 1.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2789 - - gmx:100803733 1271.91