Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2755 ATGCGCATGAGTTGCAATGGATGCCGGGTGCTGAGAAAAGGTTGCAGCGAGAATTGCAGCATCAGACCCTGTTTGCAGTGGATCAAGAGCCCTGAATCCCAAGCCAATGCTACCGTTTTCCTTGCCAAGTTCTATGGTCGTGCCGGCCTCATGAACCTCGTCAACGCAGGCCCAGAGCATCTTCGACCAGCGATTTTTCGTTCGTTGTTGTACGAGGCATGCGGTCGGATAGTGAACCCGATTTACGGGTCCGTTGGTCTGTTATGGTCGGGGAGTTGGCAGCTCTGTCAAGCCGCCGTGGAAGCTGTCTTAAAAGGAGCGCCAATTACGCCGATCACTTCCGAAGCCGCCGCTAACGGGCGGGGCCCACCTCTCAAGGCCTACGACATACGCCACGTGTCTAAAGACGAGAACTCGGCCGCGTCAAACGAAACCCAGCAGCGAGTCAAGACTCGTTCCCGCGTTAAGCGACCCCTCCCCAAGCCAAAACCCACCAACGAAAACACCACCAACAATGATACTACTACTACTACTACTACTACTACTAAGGGAACCGAATTGGGTTCGGGAGAACCGGGTTCTGCACGCGAGCCGGAGCAGTGGACCGAGGGGCTGAACCGGTGTGGGAGTCACGAGTCGTCGCTTAGCCACCAATCGGAGGCGGCGAATGAGAGCAAAGAGAGCGAGAGCATGGTGTCGGTGGAGACGGCGGAGACTTCGATCCTCTTTCGAGATGAACCGGAGTCTAACCCGAAGCGGGTTGATCGAACCGAAGAGGGTGGTGATCACGTGGGTCTGGAGCTAACGCTTGGGTTTGAACCGGCCTCGCTTGTGGTTCCTGTGAAGAAGAGAAGGATTGAGTTGAAGGATTGTAGTGGGTCGTGCAAGATGGAACTTGGCCTTGAATACACGCCTTGA 918 0.5556 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKDENSAASNETQQRVKTRSRVKRPLPKPKPTNENTTNNDTTTTTTTTTKGTELGSGEPGSAREPEQWTEGLNRCGSHESSLSHQSEAANESKESESMVSVETAETSILFRDEPESNPKRVDRTEEGGDHVGLELTLGFEPASLVVPVKKRRIELKDCSGSCKMELGLEYTP* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2755 305 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Apr4g2755 305 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Apr4g2755 305 MobiDBLite consensus disorder prediction 163 188 - -
Apr4g2755 305 PIRSF AS2 1 304 IPR017414 -
Apr4g2755 305 MobiDBLite consensus disorder prediction 206 237 - -
Apr4g2755 305 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 302 - -
Apr4g2755 305 MobiDBLite consensus disorder prediction 241 259 - -
Apr4g2755 305 MobiDBLite consensus disorder prediction 134 259 - -
Apr4g2755 305 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2755 Apr-Chr4 36060690 36062072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2755 1 301 AS2 family AT3G02550 54.313 7.22e-100 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr4g2755 LOB 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2755 - - gmx:100812981 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2755 4 36060690 36062072 Apr4g2755 4 36060690 36062072 ECH
Apr4g2755 4 36060690 36062072 Apr6g0385 6 4361219 4362463 ECH