Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2744 ATGAATGATTCTGCAGTGAAGAGTTTAGCTATCTCGGAGAAGAAGGTGCAGAAACCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGAAGACTCTCCAAGAAAAAGCTCTTCTCTAAGAAGCTGCTGCCTCCTGCTCGTGCAAAGAAATTTAAGGGAGATGAAAAGATGCCAAATTCCAAGCTTCACTTGATTGCCAATGAGAATAGTGGAGGTTTCCCAGGTTCTAAAAAGGGTGGGAATCATGGTGTAGATGTAGAGGCAAAGAGTGAAATGCGAGTTCCGAGTCTTGTAGCTAGGTTGATGGGTCTAGAATCTATTCCAGCTGCACAGCGAGATAAGTCCAAGAAAGCCTTTTGTTCTGATGATTGTGGTGATGTGATGAAGGAATCTCTGGGTAACCATTGTGAGTTGGATAAGCAAGGTGTGGATTCGGAAATGGGAATTGTAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACTGGGGTGTATGAGAGAAGGGCAGTGACTAGGTTTGGAGCTGAGGCCCTGCAAATTAAGAATGTTTTGTCCCGAGCAAGAAAGTATAATCACCATCACCCAAAGCTTGCTTCTCCTTTGAAGAGCCCCAGAATTCCTTCTGGAAAGAGTGGTTCTAGAAGCTCTAGACTAATAGGAGCTGCTACTAAGATTTTGGAACCTGGATTGCAAACCAGTAGAGCCAAAGGTTCTCTTACATACCATGCTTCCAAATATCCTCCAAAGACTGACATTGCGTCAAATGGTGTGGATGAATTGGAAACCAGTAGAGCCAAAGCTTCTCTTACATACCATGCTTCCAAATATCCTCCAAAGACTGACATTGCGTCAAATGGTGTGGAAAATAGGTCAGCAGTTATGCAAAATGAATCCTGTTATGATGCAAGCTCGGCCAAGCCATTGACCGGGCAGGCTTCATGCAAAAGTTGTGGTAATTTGGTTGATGTTGTTGACTGCAAGTTTGAGGTTGGGGGGCAACCATCTGTTCCTCCACCCCTTGTATCAGATGTGATCGCTGCTACCTCCATGGTATCTTCGCATAAGAAGGGGAAGTCATCTACTCCCTCTCGTGGACATGAAAGAGATGTAGTTCTTCTGACAAGTCGGGAAAAGCTCATATCTCTTGTTACTGAAGAAGAGGGAAAAAACATTGCACAACAGTCATGGAATGAATCCACTACCAGAAGAATCCCAATGGCCCATGAAAGTCCAGCTAAATGGAATTCATCATGTCAACGACCATTTAGGACCACAGAGGATGATGCATCTTCTTTTGCCTTAAAACACAAAACTCAAACACAAGAACAAATGTTGAGCAATGAAAGATTTTCATCTGGATCTACGATGAGTAATGTGCAAGTAAAACGAGTGTCTTCTATGAGCAGTGTGCATGGGACTAAAGACTTCGTTGCTTTGAATAGAAGCCTAAGTGGTCGAACAAGGATGAGATCACCAACAAAAGTGGATAGTTCTAAGTTTGACCTAGAGAAAAAACATTACTATAATAGACAACATAATTCCTTGTGTCATGTAAGGGCATTAGAGAGAAAAAGAAGGATTGCAAATGTCACACAATTTGAAAGCTCGGTGTCTGTCAATTCAGTTGGTGTGAAACAGAGAAATCCTCATTCTGATACACTGGGTGGAAAGAGGAGGGACTTCAATGCAGTCTCCTTGTACAGCTCAAATGCTAAAGATAAACAAGATGGTCTGGGAGAAACTGTTAAGGTTAATGACAAGAAGATCAATGATGTAGTGTCATTTACATTTAATTCCCCCTTGAATCAAAAAATAGAAATACCTGCCGATAAGGAAGAGACAAGCAGTGAAAATGAGAGGAAGACATATTTCCAAAGACCTTCACCTTTGAGAATGGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAGGAATTAACTTCTCAAAGAGATGAAGAGTTGGCTACAGGAGCTGCGCCTAAAAAATCAAGTGCTATGATTCTTCAAGAGCTGATATCTGCTCTAAGTTCAGAGCATCTAATCTGTCATGATGGTAGTCATATGTTCAATGAAAATGTTGGCTTCCATCATGGAGCAAAATCAGAAAGGTTATTAGGAACTTCTTGCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATCATGGTATTCACCCTGACTCCATGAATTACTCCTATGGTCAATTGGAACAATTTGAACATGATACTGAACTTTTAGATTCTGCAACATCCTGTAACAAAGGGAGGGCAAGTGAGATACTGACTGATCTTGTCAACCAAATTCCTATGACATTAGAAAGTTTATACTCTTTTGGGACACAATTGACAAGAAGCAAGCTCAACCATATGAAGGACATTCTCTTGAATGCTGAATTGGTGCTTGGAATTACAACTGATTGCAGAGAGGATGAAGTGCCACAGCTTCTAGTTTATCGGTTTCTTGACAAGGAGCTTGACACTATGGTAGGTGATGCTATGTGGACAGTTAATTGCTTTGTTGGTTGTGAGGACTCTAAACATAGAAAGGAGCTCAAGGGATTTCTGCTTGATTGTGTTATAGAATATCTAGAATCAAATTGCTGCCAATATTTCAACTCTGGATTTAAGGCATGGACAAAGCTGCCATTATGCATGAAAGCTAAGATGTTGGCTCAAGAGGTTAAAAGGGAAATCAACAAGTGGTTATGTATGGTTGGGATGGTACCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTTGGGGAAATGGACTGATTTTGATATTGAAGCATTTGAGGCTGGTGTTGATTTAGATGGGGACATACTTCAAATTTTGGTCGATGAAGTTGTTGAAGACCTTGTATGTTGCAAGCAGGGCTTCATTTCCTTGTAA 2949 0.4106 MNDSAVKSLAISEKKVQKPGGCVGIFFQLIDWKRRLSKKKLFSKKLLPPARAKKFKGDEKMPNSKLHLIANENSGGFPGSKKGGNHGVDVEAKSEMRVPSLVARLMGLESIPAAQRDKSKKAFCSDDCGDVMKESLGNHCELDKQGVDSEMGIVKHDSRPQKLQKTGVYERRAVTRFGAEALQIKNVLSRARKYNHHHPKLASPLKSPRIPSGKSGSRSSRLIGAATKILEPGLQTSRAKGSLTYHASKYPPKTDIASNGVDELETSRAKASLTYHASKYPPKTDIASNGVENRSAVMQNESCYDASSAKPLTGQASCKSCGNLVDVVDCKFEVGGQPSVPPPLVSDVIAATSMVSSHKKGKSSTPSRGHERDVVLLTSREKLISLVTEEEGKNIAQQSWNESTTRRIPMAHESPAKWNSSCQRPFRTTEDDASSFALKHKTQTQEQMLSNERFSSGSTMSNVQVKRVSSMSSVHGTKDFVALNRSLSGRTRMRSPTKVDSSKFDLEKKHYYNRQHNSLCHVRALERKRRIANVTQFESSVSVNSVGVKQRNPHSDTLGGKRRDFNAVSLYSSNAKDKQDGLGETVKVNDKKINDVVSFTFNSPLNQKIEIPADKEETSSENERKTYFQRPSPLRMDALGAFLEQKLKELTSQRDEELATGAAPKKSSAMILQELISALSSEHLICHDGSHMFNENVGFHHGAKSERLLGTSCNGNHLSPGSVLEASFSSSSLDESSGHHGIHPDSMNYSYGQLEQFEHDTELLDSATSCNKGRASEILTDLVNQIPMTLESLYSFGTQLTRSKLNHMKDILLNAELVLGITTDCREDEVPQLLVYRFLDKELDTMVGDAMWTVNCFVGCEDSKHRKELKGFLLDCVIEYLESNCCQYFNSGFKAWTKLPLCMKAKMLAQEVKREINKWLCMVGMVPDEIIEWEMSHSLGKWTDFDIEAFEAGVDLDGDILQILVDEVVEDLVCCKQGFISL* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2744 982 Pfam Domain of unknown function (DUF4378) 806 967 IPR025486 -
Apr4g2744 982 MobiDBLite consensus disorder prediction 542 561 - -
Apr4g2744 982 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 8 974 - -
Apr4g2744 982 MobiDBLite consensus disorder prediction 195 222 - -
Apr4g2744 982 Pfam DUF761-associated sequence motif 91 117 IPR032795 -
Apr4g2744 982 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 8 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2744 Apr-Chr4 35961350 35966885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2744 1 972 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 29.960 2.06e-78 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2744 - - aprc:113861902 1926.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2744 4 35961350 35966885 Apr4g2744 4 35961350 35966885 ECH