Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2741 ATGGCTGAAGTTGAATACCATGCAAAATCCAACACTACCACTACCCCATCTTTAAAGCTCTTTGGCATCAACATTCAGTACAAGTCCTCAAAAGATCACACTCATGATGAAGAAGGTTCAAACCAACACTATTCTCCATTAGAGTCAGAGCCTTTCAACCCTCGCGATGGAAGAAAATACGAATGCCAATACTGCCGCAGAGAGTTCGCGAATTCACAGGCATTAGGAGGACACCAAAACGCACACAAGAAAGAGAGACAACTCTTGAAACGTGCTCAAATGCAAGCTGCACGTGGCTTATTTGTTTCTTCACATCTTCAAAATGCAATCATGTATCAGCCATGGCTATACACAACGCACGCAAGTGCTTCTGCGTTTCATTCCCCAACCTTTCTAGCTCCCGGTAGACGTGTCTATGCTCGTGGTTCTTCTGCCACTGTCACAACAGCTTTAACTGATGGCCGTGGCCACCCTCTTTCAGGGCTTGGTGGCGGCGACGGTGGTGGTGGTGGTGGTTTTGCGGTGAGCTAGGGTTCGGTCTGGATTTGCATCTTAGCCTATGAGTTGTGA 570 0.4737 MAEVEYHAKSNTTTTPSLKLFGINIQYKSSKDHTHDEEGSNQHYSPLESEPFNPRDGRKYECQYCRREFANSQALGGHQNAHKKERQLLKRAQMQAARGLFVSSHLQNAIMYQPWLYTTHASASAFHSPTFLAPGRRVYARGSSATVTTALTDGRGHPLSGLGGGDGGGGGGFAVS*GSVWICILAYEL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2741 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
Apr4g2741 188 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Apr4g2741 188 Gene3D Classic Zinc Finger 50 109 - -
Apr4g2741 188 PANTHER ZINC FINGER PROTEIN GIS3 1 140 - -
Apr4g2741 188 SUPERFAMILY beta-beta-alpha zinc fingers 57 87 IPR036236 -
Apr4g2741 188 PANTHER ZINC FINGER PROTEIN 5 1 140 IPR044299 GO:0010090
Apr4g2741 188 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2741 Apr-Chr4 35954035 35954605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2741 13 100 C2H2 Transcription Factor Family AT1G67030 57.895 4.27e-25 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr4g2741 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2741 - - aprc:113862601 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2741 4 35954035 35954605 Apr4g2741 4 35954035 35954605 ECH