Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2736 ATGAAACCTCTAATTATTTTCATGTTCGGGGTTACTATTGTCACCTCAACCAATATTCGAACATGTCTTTCTGATGATCATAGCCACTACACCAACTGCAATAAGGCTTTTAGTTGCGGAAGTAGCATCACAGACCTCAAATACCCCTTTTGGGGAGGCAACAGAGAAAAGTATTGTGGTGATTCTGAATTGGAGGCACTCGCATGCGAAGAAAATGTCCCCAAGATAAACATCAGTGCCATCAACTACCGTATTCTGGGTTGGGATAATACAACAAACCAACTCACTGTGGCTAGGGACGATTACTGGGATAATATCTGCGTGAGTGATCCTAAAAACAACACGTTTGATAACACCCCGTTTCAGTATGATAATGGTCTGCTTGAGAACGTGACACTGTTTTATGATTGCCCTTCAATGCCAAATATGAATCCGTATTCTCAAAACTGCGGTTCTGGTAAATTTGTCTACTACGTTCTGGGACCTTCGTACCAGGTGGGTTCATGCACGATTGTGGTGATTCCAATTTTTAATTCCAATTCTTCACTTGTAACTACCAATAGAGTAAGCGATGCATTAGATAACGGTTTTGGGTTGAAATGGACGGGAAATTCTGAAGCGTGCAAGACATGCACTGATTCTGGTGGAGAGTGTGGCTTTGACGGAGAATTCAAATGTTTCTGCAAGGATGAACTTTCATGTTCAGTTTCTGACACGGGATCATCTTCAAAAAGGAACCGGAGGCTTACGATTGCGATAGGTGCATCAGCAGCTGGTTTTGGAGTAGTAGTGTTTCTTATGATAATTTGTTACCATAAGAGGCTTCTAAGTTTTGGAAAAAGAAGGATCTTCACGAAGAGAAGAAAATTTGTTGACAATAGTGTGGAGGTTTTCATGCAAAGTTATGGTTCTCTGGCACCAAAGCGATATAGTTATCCAGAAGTGAAAAGGATCACAAACACATTTCTAAATAAACTAGGCCAAGGAGGATATGGTGTTGTCTATAAAGCTACATTACCTGATGGTCGTCCTGTTGCAGTAAAAGTAATTAGTGAGAATAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGTATTAGTAGAACATCCCACGTAAACATTGTCTCACTATTGGGTTTTTGTTATGACATGGAGAAAAGAGCACTAATATATGAATTTATGCCTAATGGATCATTGGATAATTTCATATATAAAAGTGGTTATCCAAATGCTATTTGTAATTTGGATTGGTACACATTGTACCAAATTGGTATTGGCATTGCTCGAGGACTAGAATACTTGCATAGAGGATGCAACACAAGGATTTTGCATCTTGATATCAAACCCCAAAATATTCTTTTGGATGAAGATTTTTGCCCTAAAATATCTGACTTTGGACTAGCAAAAATATGTCTAAAGAAAGAGAGTATTGTGTCCATATTGGGCACAAGAGGAACTATAGGGTACATTGCACCTGAAGTGCTTAGCCGAACATTTGGTGGAGTTTCACACAAATCTGATGTGTATAGTTATGGCATGTTGATTCTTGAAATGATTGGGGCAAGAAAGAATTACGATAGTGGAGGATCACATACGAGTGAAATGTATTTTCCAGATTGGATTTACAAGGATCTTGAACAAGGTGATATTCCTTCTAGTTGTTTGGTTACCACAGAAGAAGAAAATGAAAAGGTAAGAAAGATGACTTTGGTGAGTCTATGGTGTGTTCAAATAAATCCATCAGATAGGCCATCAATGAGTAAAGTAGTAGAGATGTTAGAAGGAGCACTTGAGTCAGTGCCATATCCTCCAAAGCCTGTCTTGTGTTCTCCAGCTAGGCCACCTTTACAAATTTCAGATATATCTTCTAGCAATATGCAGGATACAAATTCAATAACAATTCAAAAGGGTGGTTCCATTGAATTGAATGAGTTAAGCAAAAGCATAGAGGTAAGTGTGTAG 1965 0.3858 MKPLIIFMFGVTIVTSTNIRTCLSDDHSHYTNCNKAFSCGSSITDLKYPFWGGNREKYCGDSELEALACEENVPKINISAINYRILGWDNTTNQLTVARDDYWDNICVSDPKNNTFDNTPFQYDNGLLENVTLFYDCPSMPNMNPYSQNCGSGKFVYYVLGPSYQVGSCTIVVIPIFNSNSSLVTTNRVSDALDNGFGLKWTGNSEACKTCTDSGGECGFDGEFKCFCKDELSCSVSDTGSSSKRNRRLTIAIGASAAGFGVVVFLMIICYHKRLLSFGKRRIFTKRRKFVDNSVEVFMQSYGSLAPKRYSYPEVKRITNTFLNKLGQGGYGVVYKATLPDGRPVAVKVISENKGNGEEFINEVASISRTSHVNIVSLLGFCYDMEKRALIYEFMPNGSLDNFIYKSGYPNAICNLDWYTLYQIGIGIARGLEYLHRGCNTRILHLDIKPQNILLDEDFCPKISDFGLAKICLKKESIVSILGTRGTIGYIAPEVLSRTFGGVSHKSDVYSYGMLILEMIGARKNYDSGGSHTSEMYFPDWIYKDLEQGDIPSSCLVTTEEENEKVRKMTLVSLWCVQINPSDRPSMSKVVEMLEGALESVPYPPKPVLCSPARPPLQISDISSSNMQDTNSITIQKGGSIELNELSKSIEVSV* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2736 654 PANTHER TYROSINE KINASE FAMILY PROTEIN 16 634 - -
Apr4g2736 654 Pfam Wall-associated receptor kinase C-terminal 166 230 IPR032872 -
Apr4g2736 654 Gene3D Transferase(Phosphotransferase) domain 1 395 602 - -
Apr4g2736 654 Gene3D Phosphorylase Kinase; domain 1 295 394 - -
Apr4g2736 654 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Apr4g2736 654 Pfam Protein kinase domain 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2736 654 SUPERFAMILY Protein kinase-like (PK-like) 296 595 IPR011009 -
Apr4g2736 654 ProSiteProfiles Protein kinase domain profile. 320 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2736 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Apr4g2736 654 SMART serkin_6 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2736 654 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 634 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2736 Apr-Chr4 35906619 35913993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2736 18 627 Receptor kinase-like Gene Family AT1G66910 42.573 3.80e-154 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr4g2736 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2736 - - aprc:113862598 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2736 4 35906619 35913993 Apr4g2736 4 35906619 35913993 ECH