Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2735 ATGAAACCTCTGATTATTTTCATGTTTTGGTTTACTATTGTCATCTCAATAAATATTACAACAATCCTTTGTGATGATGATAGCCACTACACCAACTGCAATAAGGCTTTTAGCTGCGGAAACAGCACTATCTCAAACCTCAGATACCCCTTTTGGGGAGACAACAGAGAAAAGTATTGTGGTGATCCTGGATTGGAGGCACTCACATGCGAAGAAAGTGTCCCCAAGATAAGCATCAATGCCATCAAATACCGTATTCTGGGTTGGGATACTACAACAAACCAACTCACTGTGGCTAGGGACGATTACTGGGATAATATCTGCGTGAGTGATCCTAAAAACAACACGTTTGATAACACCCTGTTTCAGGTTGATTATCTTATGCTTGAGAACGTGACACTGTTTTATAATTGCTCTTCAATGCCAAATGTGGGTTCATGCACGATTGTGGTGATTCCCATTTTTAATTCCAATTCTGCACTTGTAACTACCAATAGAGTAAGCGATGCATTAGATACCGGTTTTGGGTTGAAATGGACGGGAAATTATGAACAGTGCAAGACATGCTCTGATTCTGGTGGAGTGTGTGGCTTTGATGGACAATTCAAATGTTTCTGCAAGGATGGACCTCAAACAATTTCATGTCCAGTTTCAGGATCATCTTCAAAAAGGAACCGGAGGCTTACGATTGCGATAGGTGCATCAACAGCTGGTTTTGGAGGAGTAGTAGTAGTGTTTCTTATGATAATTTGTTACCATAAGAGGCGTCTAAGTTTTGGAAAAAGAAGGATCTTCATAAAGAGAAGAAAATTTGTTGACGATAGTGTGGAGGTTTTCATGAAGAGTTATGGTTCTTTGGCACCAAAGCGATATAGTTATCCAGAAGTGAAAAGGATCACCAAAACATTTCTAAATAAACTAGGCCAAGGAGGATATGGTGTCGTCTATAAAGCTACATTATCTGATGGTCGTCCTGTTGCAGTAAAAGTAATTAATGAGACTATGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGTATTAGTAGAACATCCCACGTAAACATTGTCTCACTATTGGGTTTTTGTTATGAGATGGAGAAAAGAGCACTAATATATGAATTTATGCCTAATGGATCATTGGATAATTTCATATATAAAAGTGGTTATCCAAATGCTATTTGTAATTTGGATTGGTACACATTGTACCAAATTGGAATTGGCATTGCTCGAGGACTAGAATACTTGCATAGAGGATGTAACACAAGGATTTTGCATCTTGATATCAAACCCCAAAATATTCTTTTGGATGAAGATTTTCGCCCTAAAATATCTGACTTTGGACTAGCAAAAATATGTCTAAGGAAAGAGAGTATTGTATCCATATTGGGCACAAGAGGAACTATAGGGTACATTGCACCTGAAGTGCTTAGCCGATTATTTGGTGGAGTTTCACACAAATCTGATGTGTATAGTTATGGCATGTTGATTCTTGAAATGATTGGAGCAAGAAAGAATTATGATAGTGGAGGATCACATACGAGTGAAATGTATTTTCCAGATTGGATTTACAAGGATCTTGAACAAGGTGATATTCCTTCCAGTTGTTTGGTTGCCACAGAAGAAGAAAATGAAAAGGTAAGAAAGATGACTTTGGTGAGTCTATGGTGTGTTCAAATAAATCCATCAGATAGGCCGTCAATGACTAAAGTAGTAGAGATGTTAGAAGGAGCACTTGAGTCAGTGCCATATCCTCCAAAGCCTGTCTTGTGTTCTCCAGCTAGGCCACCTTTACAAATTTCAGATACATCTTCCACCAATATGCAGGATACAAATTCAATAACAATTCAAAAGGATGGTTCCATTGAATTGAATGAATTAAGCAAAAGCATAGAAATAAGTTGTGGGAATATAAGAAACATTGGTTTTCCATTTTGGGGAGATAACCGTCCAAGTTGGTGTGGCCACCCTTCGTTGCATCTCATTTGCATGAAAAATATCAGCTACATAACCATCCATAATGTCAATTACCAGGTTTTGGTGGCCAACCCAATTGAACATACTATGAAAATCACCAGAGTGGACTACTTACAGTTACAAGGAATATGCCCTTCAAAACTTTTCAACACCAGCCTTGACACTGAGCTCTTTGTTTATGGGTCAGAGGATAAGCATCTTACCCTCTTCTATGGTTGCACTCCTTCAAATGCTGGACTTCTTCCTTGTAACCTAAATGGAGCTATTGATTATGTTTATCCTCAGTTTGGGTTTTCCCCTCCTCCTATGTTTTGCAAAGCAAGTGTGGTAGTTCCAGTTTCTCCATCATTGGTTGATATTAGAGATTTCACCAACATACAGAAGGCAATCAGAGATGGATTTATGGTGAAATGGATAGCAGGTATTGAAGAATGTGAGAAATGTGTAAAATCAGATGGAATCTGCGGTTATGACTCGAAATCAAATCAACCAACTTGTTCAAATTCATCACCAGATGCCAAAGCACCTCCACCATCCCAAGAGCCTCCTCCTCCAGGTATGGCTAAGATCATTGATATTTGGATTTTTTATTTGTTAATGAAGACTGTGTTTTGA 2592 0.3831 MKPLIIFMFWFTIVISINITTILCDDDSHYTNCNKAFSCGNSTISNLRYPFWGDNREKYCGDPGLEALTCEESVPKISINAIKYRILGWDTTTNQLTVARDDYWDNICVSDPKNNTFDNTLFQVDYLMLENVTLFYNCSSMPNVGSCTIVVIPIFNSNSALVTTNRVSDALDTGFGLKWTGNYEQCKTCSDSGGVCGFDGQFKCFCKDGPQTISCPVSGSSSKRNRRLTIAIGASTAGFGGVVVVFLMIICYHKRRLSFGKRRIFIKRRKFVDDSVEVFMKSYGSLAPKRYSYPEVKRITKTFLNKLGQGGYGVVYKATLSDGRPVAVKVINETMGNGEEFINEVASISRTSHVNIVSLLGFCYEMEKRALIYEFMPNGSLDNFIYKSGYPNAICNLDWYTLYQIGIGIARGLEYLHRGCNTRILHLDIKPQNILLDEDFRPKISDFGLAKICLRKESIVSILGTRGTIGYIAPEVLSRLFGGVSHKSDVYSYGMLILEMIGARKNYDSGGSHTSEMYFPDWIYKDLEQGDIPSSCLVATEEENEKVRKMTLVSLWCVQINPSDRPSMTKVVEMLEGALESVPYPPKPVLCSPARPPLQISDTSSTNMQDTNSITIQKDGSIELNELSKSIEISCGNIRNIGFPFWGDNRPSWCGHPSLHLICMKNISYITIHNVNYQVLVANPIEHTMKITRVDYLQLQGICPSKLFNTSLDTELFVYGSEDKHLTLFYGCTPSNAGLLPCNLNGAIDYVYPQFGFSPPPMFCKASVVVPVSPSLVDIRDFTNIQKAIRDGFMVKWIAGIEECEKCVKSDGICGYDSKSNQPTCSNSSPDAKAPPPSQEPPPPGMAKIIDIWIFYLLMKTVF* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2735 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Apr4g2735 863 Pfam Protein kinase domain 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2735 863 Pfam Wall-associated receptor kinase C-terminal 143 209 IPR032872 -
Apr4g2735 863 Pfam Wall-associated receptor kinase C-terminal 763 826 IPR032872 -
Apr4g2735 863 SMART serkin_6 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2735 863 PANTHER TYROSINE KINASE FAMILY PROTEIN 624 825 - -
Apr4g2735 863 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 615 - -
Apr4g2735 863 MobiDBLite consensus disorder prediction 825 844 - -
Apr4g2735 863 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Apr4g2735 863 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Apr4g2735 863 Gene3D Phosphorylase Kinase; domain 1 277 375 - -
Apr4g2735 863 Pfam Wall-associated receptor kinase galacturonan-binding 33 99 IPR025287 GO:0030247
Apr4g2735 863 Pfam Wall-associated receptor kinase galacturonan-binding 634 692 IPR025287 GO:0030247
Apr4g2735 863 ProSiteProfiles Protein kinase domain profile. 301 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2735 863 Gene3D Transferase(Phosphotransferase) domain 1 376 583 - -
Apr4g2735 863 PANTHER RUST RESISTANCE KINASE LR10-RELATED 624 825 IPR045874 GO:0004672
Apr4g2735 863 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 615 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2735 Apr-Chr4 35896191 35907533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2735 621 825 Receptor kinase-like Gene Family AT1G66910 24.786 1.60e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr4g2735 Pkinase 4.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2735 - - aprc:113862598 1745.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2735 4 35896191 35907533 Apr4g2735 4 35896191 35907533 ECH