Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2733 ATGAAACTTGTCCTTCACCCATCTTCCGTTTTCATATTATTGATCACTTGCATCATCTCAACCAATATTCGAACATGTCTTTGTGATGATGATAGCCACTACACCAACTGCAATAAGGCTTTCAATTGCGGAAGTAGCATCACAGACCTCAAATACCCATTTTGGGGAGGCAACAGAGAAAAGTATTGTGGTGATCCTGAATTGGAGGCACTCGCATGCGAAGAAAATGTCCCCAAGATAAACATCAGTGCCATCAACTACCGTATTCTGGGTTGGGATAATACAACAAACCAACTCACTGTGGCTAGGGACGATTACTGGGATAATATCTGCGTGAGTGATCCTAAAAACAACACGTTTGATAACACCCCGTTTCAGTATGATAATGGTCTGCTTGAGAACGTGACACTGTTTTATGATTGCCCTTCAATGCCAAATATGAATCCGTATTCTCAAAACTGCGGTTCTGGTAAATTTGTCTACTACGTTCTGGGACCTTCGTACCAGGTGGGTTCATGCACGATTGTGGTGATTCCAATTTTTAATTCCAATACTTCACTTGTAACTACCAATAGAGTAAGCGATGCATTAGATAACGGTTTTGGGTTGAAATGGACGGGAAATTATGAAGCGTGCAAGACATGCACTGATTCTGGTGGAGAGTGTGGCTTTGACGGAGAATTCAAATGTTTCTGCAAGGATGAACCTCATACAATTTCATGTTCTGACACGGAAAAAAAAAGCTCTAGCAAAGTTGGTGTTGCAATAGGCGCTAGTCTAGGAGTTGTAGCCCTTGTTGCCATTCTTGGCTGTGTGTACTTTATTGTGCGAAGAAGAAGAAACAATGCTGATAAATCAAGAAGCAAGGACCACTTCATGGCTCCTTCAAGCAGAGACGCTTTAACATCTACAACTAATACGTCTCGAACTGTCTCTTCTTACCCGTCTTCCAAGTCTGAAATAGTGCAAAGGAGTTCCTACTTTGGTGTACAAGTCTTCACCTATGATGAACTAGAGGAAGCTACCAAAAATTTTCACCCTTCTAGAGAACTTGGTGAGGGAGGTTTTGGCGCTGTTTACAAAGGTGAACTCCAAGATGGACGTGTGGTTGCAGTGAAACGCCTTTATGAAAGCAATTTCAAACGTGTTGAGCAGTTCATGAATGAAGTTGAGATTCTAGCCCGGTTAAGGCACAAGAACCTTGTGACACTCTTTGGATGCACCTCTAGACGTAGCAGAGAACTTCTCCTTGTTTATGAATTCATACCTAATGGAACAGTGGCTGATCATCTACAAGGAAACAGATCAAAATCAAGTTTTCTCCCATGGCCAGTGAGATTGAACATTGCAGTAGAAACAGCTGAGGCACTAGCTTACCTTCATTTATCTGATGTCATACACCGTGATGTTAAATCCAACAACATTCTCCTAGATGATAAATTTCAAGTCAAGGTTGCTGATTTTGGTCTCTCAAGGTTGTTCCCAAACCATGTCACTCATGTCTCAACTGCTCCACAAGGAACACCAGGTTATGTTGACCCTGAGTATTATCAATGCTACCAACTCACTGACAAAAGTGATGTTTATAGCTTTGGAGTGGTCTTAGTTGAGCTTATATCATCATTACAAGCTGTGGACATCAACAGGCACCGCAATGATGTGAACTTAGCTAACATGGCCATCAATAAGATTCAGAACCAGGAATTGCATGAGTTGGTTGATCCTTATCTTGGATTTGAAAAGGATTACGCTATAAGGAGGATGACAACAGCAGTGGCAGAATTAGCCTTTAGGTGCTTGCAGCAGCAAAGAGAGATGAGACCCTCCATGGATGAGGTGGTGGAGATCTTGAGAGGAATCAAAAGTGATGAACTTGGTGAAAGGGAAGAGGCAGTAGTAGTGGATGTTAGAACAGATGATGTTATACCTTTGAAGAAGGTTGCTTGCCCAGTTTCACCTGATTCTGTTGTTGATAAATGGGTTAGCGGCTCCTCTGTATCTAATTCCTCATAG 2013 0.4198 MKLVLHPSSVFILLITCIISTNIRTCLCDDDSHYTNCNKAFNCGSSITDLKYPFWGGNREKYCGDPELEALACEENVPKINISAINYRILGWDNTTNQLTVARDDYWDNICVSDPKNNTFDNTPFQYDNGLLENVTLFYDCPSMPNMNPYSQNCGSGKFVYYVLGPSYQVGSCTIVVIPIFNSNTSLVTTNRVSDALDNGFGLKWTGNYEACKTCTDSGGECGFDGEFKCFCKDEPHTISCSDTEKKSSSKVGVAIGASLGVVALVAILGCVYFIVRRRRNNADKSRSKDHFMAPSSRDALTSTTNTSRTVSSYPSSKSEIVQRSSYFGVQVFTYDELEEATKNFHPSRELGEGGFGAVYKGELQDGRVVAVKRLYESNFKRVEQFMNEVEILARLRHKNLVTLFGCTSRRSRELLLVYEFIPNGTVADHLQGNRSKSSFLPWPVRLNIAVETAEALAYLHLSDVIHRDVKSNNILLDDKFQVKVADFGLSRLFPNHVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLVELISSLQAVDINRHRNDVNLANMAINKIQNQELHELVDPYLGFEKDYAIRRMTTAVAELAFRCLQQQREMRPSMDEVVEILRGIKSDELGEREEAVVVDVRTDDVIPLKKVACPVSPDSVVDKWVSGSSVSNSS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2733 670 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 670 IPR044652 -
Apr4g2733 670 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Apr4g2733 670 ProSiteProfiles Protein kinase domain profile. 345 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2733 670 CDD STKc_IRAK 351 620 - -
Apr4g2733 670 MobiDBLite consensus disorder prediction 285 315 - -
Apr4g2733 670 MobiDBLite consensus disorder prediction 297 315 - -
Apr4g2733 670 Gene3D Phosphorylase Kinase; domain 1 316 421 - -
Apr4g2733 670 SMART serkin_6 345 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2733 670 Coils Coil 547 567 - -
Apr4g2733 670 Pfam Wall-associated receptor kinase C-terminal 169 234 IPR032872 -
Apr4g2733 670 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Apr4g2733 670 Pfam Protein kinase domain 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2733 670 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 5 670 - -
Apr4g2733 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Apr4g2733 670 SUPERFAMILY Protein kinase-like (PK-like) 318 617 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2733 Apr-Chr4 35878829 35887955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2733 35 670 Receptor kinase-like Gene Family AT1G25390 44.411 8.74e-167 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr4g2733 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2733 - - gmx:100811407 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2733 4 35878829 35887955 Apr4g2733 4 35878829 35887955 ECH