Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2704 ATGCATACAGTTGCAATTGGAAGAGAATGGCCAAAAAAATATGAGGGACATGCAGTAGGAATTGATCTTGGCACTACTTATTCATGTGTGGCAATATGGCAGGATCAAAATAACAGAGCTGAAATCGTACACAACGAACAAGGAAACAGAACAACACCTTCTTCTGTTGCTTTCACGAGTACTCATAGGCTCATTGGGGATGCTGCAAAAAATCAAGCTGCTTCTAACCCTTCCAACACTGTCTTTGATGCAAAGAGGTTGATCGGAAGGAAATACAGTGATCCCGTCATTCAGAATGACGTGAAGCTGTGGCCATTCAATGTGATTGCTGGCAAAGATGACAAACCCATGATTGTTGTTAAGTACAAGGGTGAGGAAAAGGAACTTGCTGCTGAGGAAATCTCAGCTATGATTCTCTCAAAGATGCGTGAGATTGCTGAGGCATTTTTGGGTTCACCTGTGAAGAATGCAGTTGTTACTGTGCCTGCTTATTTCAATGACTCTCAACGTAAAGCTACCAAAGATGCTGGTGCCATTGCTGGCCTCAATGTTATGCGGATAATCAATGAACCCACTGCTGCAGCTCTTGCTTATGGCCTTCAAAAGAAAGGAAGTTTTGTTGTAAAGAGAAATGTTTTTATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTCTTCTCACAATTAAGAATGAGACTTTTGAAGTTAAGGCCACCGCAGGAGACACTCATCTTGGAGGAGAGGACTTTGATAACCGAATGGTGAACCATTTTGTGCAAGAGTTCAGGACAAAGAACAAAGTTGACATTAGTGGGAACCCAAGAGCCCTGAGGAGGTTGAGAACTGCATGTGAGAAGGCAAAAAGGACACTTTCATTTGATACTGAGACCACGATTGATGTAGATTCTATAAGTGTTGGTCTTGATCTATGTTTCCCACTCTCTCGTGCAAGGTTTGAGGAGCTAAACATGGACCTATTTAGAAAGTGCATGGACACTGTTGAGAAGTGTCTTAATGATGCCGAGATGGACAAGAGTGAGGTACATGAAGTAGTACTTGTTGGTGGTTCGTCCAGGATTCCCAAAGTGCAAAAACTATTGCAAGATTTCTTTAGTGGGAAGGATCTTTGCAAAGGTATAAACCCTGATGAGGCTGTTGCTTATGGGGCTGCTGTGCAGGCTGCTATGTTGGGTGAAGGCATTAATCTTCTTCACAATTTAGTGCTAATGGATGTTACCCCGCTTTCACTGGGTATATCGACAAAAGGAGATCTCATGAGTGTAGTAATACCTAGGAATACTACCATTCCTACTAAGAAGAAAGAAGTATATTTAACAGCTGCAGATTTTCAATCTGGAGTGTCTATCAGTGTTTATGAGGGTGAGAGGACAAGAGCAAGTGATAATAACTTGCTGGGTTTGTTTAATCTTTCAGTTTCTCTTGCTCCTCGAGGTCTTCCACTAAAGGTAAGTTTTTCTATAGATGCCAATAGTATATTAAACGTCTCTGCTAAGGAAGAAACATCAGGGAATAAGAAAGATATTACTATAAAGAATGAAAGAGGAAGATTGTCAGCGGAAGAAATTGAGAGAATGATTGAAGAAGCTGAGACTTACAAGGTTAACGATATGAAGTACATAAAGAAGGTTAAGGCAATGAATAATTTGGATGATTACCTTTACTATATGAATAAAGTTATGAATGATAAGTTTTTGAGTTCTGTACTTTCCCCACTAGACAAGATGAAGATCAAAGCTGGAATTAAAAAGGGCCAAAATTTGATTGGTGACAAAGATCAGGTTGAAACATTTGAGTTTGTGAACTATTTGAGCCAGCTCGAGAGTGCGTTTGATTCAATTCTGGGCAAGAACAATACTAGTTGGATCTATGATGAAAGTGATGAGGATTATTACTAA 1917 0.4006 MHTVAIGREWPKKYEGHAVGIDLGTTYSCVAIWQDQNNRAEIVHNEQGNRTTPSSVAFTSTHRLIGDAAKNQAASNPSNTVFDAKRLIGRKYSDPVIQNDVKLWPFNVIAGKDDKPMIVVKYKGEEKELAAEEISAMILSKMREIAEAFLGSPVKNAVVTVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAALAYGLQKKGSFVVKRNVFIFDLGGGTFDVSLLTIKNETFEVKATAGDTHLGGEDFDNRMVNHFVQEFRTKNKVDISGNPRALRRLRTACEKAKRTLSFDTETTIDVDSISVGLDLCFPLSRARFEELNMDLFRKCMDTVEKCLNDAEMDKSEVHEVVLVGGSSRIPKVQKLLQDFFSGKDLCKGINPDEAVAYGAAVQAAMLGEGINLLHNLVLMDVTPLSLGISTKGDLMSVVIPRNTTIPTKKKEVYLTAADFQSGVSISVYEGERTRASDNNLLGLFNLSVSLAPRGLPLKVSFSIDANSILNVSAKEETSGNKKDITIKNERGRLSAEEIERMIEEAETYKVNDMKYIKKVKAMNNLDDYLYYMNKVMNDKFLSSVLSPLDKMKIKAGIKKGQNLIGDKDQVETFEFVNYLSQLESAFDSILGKNNTSWIYDESDEDYY* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2704 638 Gene3D - 203 377 - -
Apr4g2704 638 ProSitePatterns Heat shock hsp70 proteins family signature 3. 351 365 IPR018181 -
Apr4g2704 638 SUPERFAMILY Actin-like ATPase domain 210 397 IPR043129 -
Apr4g2704 638 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 396 522 IPR029047 -
Apr4g2704 638 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 552 623 IPR029048 -
Apr4g2704 638 Pfam Hsp70 protein 18 602 IPR013126 GO:0005524|GO:0140662
Apr4g2704 638 Gene3D - 19 395 - -
Apr4g2704 638 SUPERFAMILY Actin-like ATPase domain 17 202 IPR043129 -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 17 30 - -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 47 59 - -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 69 77 - -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 157 177 - -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 220 230 - -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 348 364 - -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 380 400 - -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 406 425 - -
Apr4g2704 638 PRINTS 70kDa heat shock protein signature 485 501 - -
Apr4g2704 638 ProSitePatterns Heat shock hsp70 proteins family signature 1. 21 28 IPR018181 -
Apr4g2704 638 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 406 557 IPR029047 -
Apr4g2704 638 ProSitePatterns Heat shock hsp70 proteins family signature 2. 214 227 IPR018181 -
Apr4g2704 638 Gene3D Actin; Chain A, domain 4 246 329 - -
Apr4g2704 638 PANTHER HEAT SHOCK 70 KDA PROTEIN 13 625 - -
Apr4g2704 638 PANTHER HEAT SHOCK PROTEIN 70KDA 13 625 IPR013126 GO:0005524|GO:0140662
Apr4g2704 638 Gene3D - 524 625 IPR029048 -
Apr4g2704 638 Gene3D - 82 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2704 Apr-Chr4 35656776 35658876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2704 13 623 Calmodulin-binding Proteins AT3G12580 66.612 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2704 K03283 - gmx:102667578 806.979