Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2684 ATGAGGAGAAATCAGAAGCTAAGCGATAAAGTTACTATTCTTCAAAAGTTGGTTTCACCTTTTGGCAAGACTGACACTGCTTCAGTTCTTCATGAGGCTTCTCTTTATATAAAGCTTCTTCAAGCACAAATCCAGACATTGTTTCAGATGCTGAGTTTCTCTTACACTAGTACGACTAAAGTCCCTCATATGCAGGATTGTGGGGACAAATTGCTGGTTGACCTAAGGAGCAGAGGACTTTGTTTGGTCCCCATATCAATCACACAGACAGTAACAATGGAAGACCAGATTCATCATGCTTCAGCCTCAAGAATTATTCTACCCTGA 327 0.4067 MRRNQKLSDKVTILQKLVSPFGKTDTASVLHEASLYIKLLQAQIQTLFQMLSFSYTSTTKVPHMQDCGDKLLVDLRSRGLCLVPISITQTVTMEDQIHHASASRIILP* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2684 108 CDD bHLH_AtbHLH_like 2 47 IPR045239 -
Apr4g2684 108 Gene3D - 1 59 IPR036638 GO:0046983
Apr4g2684 108 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 3 95 - -
Apr4g2684 108 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 40 IPR011598 GO:0046983
Apr4g2684 108 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 59 IPR036638 GO:0046983
Apr4g2684 108 PANTHER TRANSCRIPTION FACTOR BHLH112 3 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2684 Apr-Chr4 35498979 35499806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2684 3 88 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21340 48.980 1.71e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2684 - - aprc:113862587 212.231