Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2683 ATGCATTTGCAAAACACTTGTTTCTTTGAATCACCACATAACTTGACTGAGGAGATTGCAATGGCAGAGAGAGTGGCAATAGGAATTGATCTAGGAACCACAAACTCGTGCGTTGGTGTGTGGCGTCATGGTCGAGTGGAGATCATTGTGAACGATCAAGGCAACAGAACAACACCCTCTTACGTTGCCTTCAAAGGCACCAAAAGAATGATCGGTGATGCTGCTAAAAACCAGGCCACAACCAACCCCACTAACCCTGTCTTCGATGCAAAGCGATTAATAGGTAGAAGATTTGGCAATTCTGAGGTTCAGAATGACATGCAGCTATGGCCATTCAAAGTTATTAGTGATGCTAACAACAAACCCATGATTGTTGTTAATTACAATCGTGAGGAAAAACATTTTTGTGCTGAGGAAATCTCATCCATGGTCTTGGCAAAGATGCATGAGATTGCAGAAGATTTCCTCAGATCAAAAGTGAAGAATGTTGTAATCACTGTGCCTGCATGCTTCAATGACTCTCAGCGCCAAGCTACCAAAGATGCTGGAACCATTGCTGGCCTCAATGTCATGAGAATAATCCCTGAACCTACTGCAGCAGCTATTGCATATTGCCTCGACAAGAAATACTGTGGAAGAAAAAATGTTGTCATCTTTGATCTGGGTGGTGGTACTTTGGATGTTTCTCTTCTCACAATTGAGAAAAATAATATCGAAGTTAAGGCCATTGCTGGAGACACTCACCTTGGTGGAGTGGATTTTGATAACAAAATGATGAACCATTTTGTAAACGAGTTTGAAATGGACATTAGTGGGGACCCAAGAGCCCTTAGGAGGTTGAGGACTACTTGTGAGAAAGCAAAGAGGGAACTCTCTAGCACTAATGAGACCATCATTGAGGTAGACTCTTTGTATCAAGGTATTGATCTCCATTCATCAATGAGTCGTGCAGAGTTTGAGGAACTTAACCAGGAGTACTTTAACAGGTGTATGGAGCTTGTAGAGAAGTGTCTAATAGATGCTAAGATGGACAAGAGTAGTGTTGATGATGTTGTCCTTGTGGGTGGTTCTACTAAGATTCCCAAAGTGCAACAGCTATTGAGGAACTTCTTTGATGGCAAAGTTCTATGCAAGTGCATCAACCCTGATGAGGCTATTGCTTGTGGTGCTGCTGTGTTAGCTTCTAAATTGAGTGGTGAGTGCTGTGAGAAGGTTAGAGACTTGTCACTTGGAGAAGTAACTCCTTTGTCCCTTGGAGTACAGACACATGAAGGAATCATGAATACAATAATTCCTAGGAACACTCTCATTCCTATAAAGATGGAAGTAGTGTTCACTACACATGTTGATAACCAAACCAATATCTGGATTCAAGTTTACGAGGGTGAGAGGCAAACAGCTGTGGACAACAACTTTCTAGGTGAGTTGGTATTGGAAATTCCTCCAGCTAGAAGGTTTGTTGGGTTTGAAGTTGATTATGATGGCATCTTACATGTCTCTGCTAAGGAGAAAAGCAGTGGAGTAAATGAGAGGGTTACCGTAATAAATCACAAGGGAAGGTTATCAAGAGGAGAGATAAAAAGAATGATCTCAGAAGCTGAGAAATACAAGGATGAAGATGAGAGGTATAAGAAGAATGAAGAAGCATGGGATGAATTGGAGAGAGATGCATTCGAAATGAAAAATGATATAAATGATAAGGAGATTAATTGGACTCTTTCCAAGGAACAAGAGAGAAAAATCAACAATGCAATTGAATTTGCCTTAAAATTCCTTGAGGAGAATATGGATGCAAAAGAAGAAAAAAATATTGACAAAATACGGAGTGTTCTTTCATATGTCTCTGATGTAATTATTAAGAATCTCAAGTGTAAGGCTAATAGTGGGCCTTCAGGTACTGATGCTGCCTCGCCTTCAGGTATTCCTGCTGCCCGGCCTTCAGGTATGCCTGCTGCCTCTGCCAGTAAGGGTAGAAATCTTGGCTGGGTAAAAAAATTGGCCCACTTTGCTCTCCATGCATCTCATGCAGCTCATGCAGTTCATGGAGCTCATGTGGTTGTTTCTACAATTACTAACAGTATGTCAAATTAA 2091 0.4113 MHLQNTCFFESPHNLTEEIAMAERVAIGIDLGTTNSCVGVWRHGRVEIIVNDQGNRTTPSYVAFKGTKRMIGDAAKNQATTNPTNPVFDAKRLIGRRFGNSEVQNDMQLWPFKVISDANNKPMIVVNYNREEKHFCAEEISSMVLAKMHEIAEDFLRSKVKNVVITVPACFNDSQRQATKDAGTIAGLNVMRIIPEPTAAAIAYCLDKKYCGRKNVVIFDLGGGTLDVSLLTIEKNNIEVKAIAGDTHLGGVDFDNKMMNHFVNEFEMDISGDPRALRRLRTTCEKAKRELSSTNETIIEVDSLYQGIDLHSSMSRAEFEELNQEYFNRCMELVEKCLIDAKMDKSSVDDVVLVGGSTKIPKVQQLLRNFFDGKVLCKCINPDEAIACGAAVLASKLSGECCEKVRDLSLGEVTPLSLGVQTHEGIMNTIIPRNTLIPIKMEVVFTTHVDNQTNIWIQVYEGERQTAVDNNFLGELVLEIPPARRFVGFEVDYDGILHVSAKEKSSGVNERVTVINHKGRLSRGEIKRMISEAEKYKDEDERYKKNEEAWDELERDAFEMKNDINDKEINWTLSKEQERKINNAIEFALKFLEENMDAKEEKNIDKIRSVLSYVSDVIIKNLKCKANSGPSGTDAASPSGIPAARPSGMPAASASKGRNLGWVKKLAHFALHASHAAHAVHGAHVVVSTITNSMSN* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2683 696 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 410 548 IPR029047 -
Apr4g2683 696 Gene3D - 88 143 - -
Apr4g2683 696 Gene3D Actin; Chain A, domain 4 250 329 - -
Apr4g2683 696 ProSitePatterns Heat shock hsp70 proteins family signature 3. 351 365 IPR018181 -
Apr4g2683 696 SUPERFAMILY Actin-like ATPase domain 24 208 IPR043129 -
Apr4g2683 696 ProSitePatterns Heat shock hsp70 proteins family signature 2. 218 231 IPR018181 -
Apr4g2683 696 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 23 626 - -
Apr4g2683 696 ProSitePatterns Heat shock hsp70 proteins family signature 1. 29 36 IPR018181 -
Apr4g2683 696 SUPERFAMILY Actin-like ATPase domain 213 396 IPR043129 -
Apr4g2683 696 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 548 621 IPR029048 -
Apr4g2683 696 Gene3D - 549 651 IPR029048 -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 25 38 - -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 53 65 - -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 75 83 - -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 163 183 - -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 224 234 - -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 348 364 - -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 380 400 - -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 407 426 - -
Apr4g2683 696 PRINTS 70kDa heat shock protein signature 482 498 - -
Apr4g2683 696 Pfam Hsp70 protein 26 615 IPR013126 GO:0005524|GO:0140662
Apr4g2683 696 Coils Coil 526 556 - -
Apr4g2683 696 MobiDBLite consensus disorder prediction 627 654 - -
Apr4g2683 696 Coils Coil 277 297 - -
Apr4g2683 696 Gene3D - 27 394 - -
Apr4g2683 696 Gene3D - 209 377 - -
Apr4g2683 696 Coils Coil 582 609 - -
Apr4g2683 696 PANTHER HEAT SHOCK PROTEIN 70KDA 23 626 IPR013126 GO:0005524|GO:0140662
Apr4g2683 696 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 403 551 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2683 Apr-Chr4 35489645 35493690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2683 22 620 Calmodulin-binding Proteins AT3G12580 62.520 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2683 K03283 - gmx:100783822 746.888