Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2682 ATGGCAGAAAGAGTGGCAATAGGAATCGATTTAGGAACAACATACTCGTGCGTTGGTGTGTGGTGTCATGATCGAGTGGAGATCATTGTGAATGATCAAGGCAACAGAACAACACCCTCTTATGTTGCCTTCAATCGCACCCAAAGAATGATTGGTGATGCTGCTAAAAATCAAGCTGCAACCAACCCCACCAACACTGTCTTTGATGCAAAGCGATTAATAGGTAGAAGATTTAGTGATTCTGAGGTTCAGAATGACACGAAGCTATGGCCATTCAAGGTTATTAGTGATGATGAAAACAAACCCAAGATTGTTGTTAATCACAATTCTGAGGAAAAGCATTTTTCAGCTGAGGAAATCTCATCCATGGTCTTGGCAAAGATGCGCGAGATTGCAGAAGATTTCCTCAGATCAAAAGTGAAGAATGTTGTTATCACTGTGCCTGCTTATTTCAATGACTCTCAGCGCCAAGCTACCAAAGATGCTGGTGCCATTGCTGGCCTCAATGTTATGAGAATAATCAATGAACCTACTGCAGCAGCTATTGCATATGGCCTTGACATGGAATGTTGTAATTATGGAAGGAGAAATGTTTTTATCTTTGATCTGGGTGGTGGTACTTTGGATGTTTCTCTGCTCAAAATTGAGAAAAATAATATTGAAGTTAAGGCCATTACTGGAGACACTCACCTTGGTGGAGAGGATTTTGATAACAAAATGATGAACCATTTTGTAAAGGAGTTTGAAAGAATGAACAAAATGGACATTAGTGGAAACCCAAGAGCCCTTAGGAGGTTGAGGACTGCTTGTGAGAAAGCAAAGAGGGTACTCTCCAGCACTGATGAGACCATCATTGAGGTAGACTCTTTGTATCAAGGTATTGATCTCCATTCATCAATGAGTCGTGCAAAGTTTGAGGAACTTAACAAGGAGTACTTTAACAAGTGTATGGAGCTTGTAGAGAAGTGTCTAATAGATGCTAAGACGGACAAGAGTAGTGTTGATGATGTTGTCCTTGTGGGTGGTTCTACTAGGATTCCCAAAGTGCAACAGCTATTGAGGAACTTCTTTGATGGGAAAGATCTATGCAAGCGCATCAACCCTGATGAGGCTATTGCTTATGGTGCTGCTGTGTTAGCTTCTAAATTGAGTGGTGAGTGCTGTGAGAAAGTTAGAGACTTGTCACTTGGAGAAGTAACTCCTTTGTCCCTTGGACTACAGACACATGGAGGAATCATGAAAACAATAATTCCTAGGAACACTCTCATTCCTATAAAGATGGAAGAAGTGTTCACTACACATGTTGATAACCAAACCAATATCTTGATTCATGTTTACGAGGGTGAGAGGCAAACAGCTATGGACAACAACTTGTTAGGTAAGTTTGTGTTGGAAATTCCTCCAGCTCGAAGGTTTGTTCCTCAGATTAGTGTTGGCTTTGAACTAGATGATGATGGCATCTTACATGTCTCTGCTAAGGAGAAAAGCAGCGGAATAAATGAGAAGGTTACCGTAATAAATCACAAGGGAAGGTTATCAAGAGGAGAGATAGAAAGAATGATCTCAGAAGCTGAGAAGTACAAGGCTGCAGATGAGAGGTATAAGAAGAAAGTAGAAGCAAGGCATGTATTGGAGAGACATGCATTCAACTTGCAAAATGCTATAAATGATAAGGATATTAGTTTGAAGCTTTCCACAGAAGACGAGAAAAAAATTAAAAATGCAATTGAATTTGCCTTAAAATGGCTTGAGCTGAATGTGGATGCTAAACAAGAAGATTTTGACAATAGGCTGAGTGTTCTTTCAAATGTCTTTGATGAAATTATTGTGAAGATGATAAATTGTGAGGATAATCGTGTGGCTTCTGCAGGTACTGGCGCTGCCTCTTCCAGTAATAGTGGAAAGCATCGCTGGTTAAAAATATTGGCCAAATTTGCTCTCCAGGCAGTGTATTCAGCTATTACAGGAAATATCATTGGGTTTGTTTCTATAGTTCTTGACACTCTGTCAAATTAA 2016 0.3993 MAERVAIGIDLGTTYSCVGVWCHDRVEIIVNDQGNRTTPSYVAFNRTQRMIGDAAKNQAATNPTNTVFDAKRLIGRRFSDSEVQNDTKLWPFKVISDDENKPKIVVNHNSEEKHFSAEEISSMVLAKMREIAEDFLRSKVKNVVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDMECCNYGRRNVFIFDLGGGTLDVSLLKIEKNNIEVKAITGDTHLGGEDFDNKMMNHFVKEFERMNKMDISGNPRALRRLRTACEKAKRVLSSTDETIIEVDSLYQGIDLHSSMSRAKFEELNKEYFNKCMELVEKCLIDAKTDKSSVDDVVLVGGSTRIPKVQQLLRNFFDGKDLCKRINPDEAIAYGAAVLASKLSGECCEKVRDLSLGEVTPLSLGLQTHGGIMKTIIPRNTLIPIKMEEVFTTHVDNQTNILIHVYEGERQTAMDNNLLGKFVLEIPPARRFVPQISVGFELDDDGILHVSAKEKSSGINEKVTVINHKGRLSRGEIERMISEAEKYKAADERYKKKVEARHVLERHAFNLQNAINDKDISLKLSTEDEKKIKNAIEFALKWLELNVDAKQEDFDNRLSVLSNVFDEIIVKMINCEDNRVASAGTGAASSSNSGKHRWLKILAKFALQAVYSAITGNIIGFVSIVLDTLSN* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 5 18 - -
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 33 45 - -
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 55 63 - -
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 143 163 - -
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 206 216 - -
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 334 350 - -
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 366 386 - -
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 393 412 - -
Apr4g2682 671 PRINTS 70kDa heat shock protein signature 473 489 - -
Apr4g2682 671 ProSitePatterns Heat shock hsp70 proteins family signature 2. 200 213 IPR018181 -
Apr4g2682 671 Gene3D - 68 123 - -
Apr4g2682 671 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 389 545 IPR029047 -
Apr4g2682 671 SUPERFAMILY Actin-like ATPase domain 4 188 IPR043129 -
Apr4g2682 671 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 3 620 - -
Apr4g2682 671 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Apr4g2682 671 Coils Coil 517 537 - -
Apr4g2682 671 PANTHER HEAT SHOCK PROTEIN 70KDA 3 620 IPR013126 GO:0005524|GO:0140662
Apr4g2682 671 Gene3D Actin; Chain A, domain 4 232 315 - -
Apr4g2682 671 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 388 540 IPR029047 -
Apr4g2682 671 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 539 614 IPR029048 -
Apr4g2682 671 ProSitePatterns Heat shock hsp70 proteins family signature 3. 337 351 IPR018181 -
Apr4g2682 671 Gene3D - 541 614 IPR029048 -
Apr4g2682 671 SUPERFAMILY Actin-like ATPase domain 195 385 IPR043129 -
Apr4g2682 671 Pfam Hsp70 protein 6 612 IPR013126 GO:0005524|GO:0140662
Apr4g2682 671 Gene3D - 189 363 - -
Apr4g2682 671 Gene3D - 7 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2682 Apr-Chr4 35484906 35487798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2682 2 624 Calmodulin-binding Proteins AT3G12580 66.667 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2682 K03283 - gmx:100798636 938.332