Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2678 ATGTCTTTTCAGCATAAAAGCTTTTGGATGCTACGGGATGCTGGCTGCTTGGCTGAAGAAAATGTGGGATATGAGAATTCTTCCAGAATTGAACCAAAGAGAAGTCATCAGTGGTTTATGGATACAGGTGAGGCAGAAATATTCAGCAACAAGAAACAAGCAATTGAAGCTGTTAGTGGCAGGCCAATTTCAGGAGTTTCAACCGTGAATGTTTCCCAATGGGAAACCAATACAGGATTTCACTCAGTCACAGGTCAGTTTTCTGACCGCCTTTTTGGATCTGATCTTGTTAGGACTGCTAATTTGGTTGATAAGAACATGTCATCAATTGGAAGTGGAAATCCAAACATGGAAAGGAAGGATTTTGAAAATCAATATGGTAATGATCCATCTGTGGGGTTGTCAATATCTCATTCCATAGCAGACCCTTCAGCATGTTTAAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAACTGCATGCCTGCTGCATCTATGGGCCACTCCTATAGTAGGGCTGATAGTAGTACCATTTCAGTAGGTGCTGGCTACAATAAGAACAATGGAAATATTTCATTGGGCTCAACTTATAACAATGGAAATGACAACGCCATTGCTATGGGGACGAGAATAAGTAAGACTGATGACAATCTCCTTTCAATGGCTCACACCTTCAATAAAGGGGATGGAAATTTTATGTTGATGGGCCACAACTATGGCAAGGGAGATGAAAGTATCTTATCAATGGGTCAGCCCTTTGATAGGGGAGATGGAAATTTCATATCAATGGGTCAATCATATGAAAAGGAAGACGGCAGTTTAATATCTCTGGGTACCTCATATACCAAGGGGCACGAGAGCTTTATATCAATGGGTCCAACCTATGGTAAATCAGGAGAAAATTTCATATCCGTTGCTCCTTATGACAAGGGCACTGATCATATAATATCAATGGGTCCAACATATGATAAGGTGGATTCTAATATCGCACCAACCGTTCCATCATATGACAGGAGAGATTCTAGTTCTTTACCTGTGGGTCAGAACCACCACAAGGGTCAGAGCAGCACCATATCTTTTGGAGGTTTTCACGATGACCCTGAACCAAATCCCTCTGGTGGAATCATCAGTGGATATGATCTCTTGATAGGAAGCCAGAACTCAGCTCAAGGTTTGGATAGCCAGAAGGATTTGACTGAGTCGAACTCTGAATCACTTGTAAATAGCATTCCAAAACCCAATACTAAAAATGATACTGTTGCCAAGAACAAAGAGCCAAAGACAACCAAGAAGGCTCCTCCTAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAATCTCAAAGGAATCATAAAAGGAACTGGTTATTTGTGTTCATGTGATGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAATTTGAGCGTCATGCTGGTGCCAAGACAAAGCACCCTAACAATCACATATACTTTGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAGTTGAAAAACACTCCGCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCCACCATCAATCAAAAGAACTTTCGTTTGTGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTACAGCGAATCTATGGAAAGGATGAAGTGAGCATACCATCTTGA 1746 0.4089 MSFQHKSFWMLRDAGCLAEENVGYENSSRIEPKRSHQWFMDTGEAEIFSNKKQAIEAVSGRPISGVSTVNVSQWETNTGFHSVTGQFSDRLFGSDLVRTANLVDKNMSSIGSGNPNMERKDFENQYGNDPSVGLSISHSIADPSACLNFGGIRKVKVNQVRDSDNCMPAASMGHSYSRADSSTISVGAGYNKNNGNISLGSTYNNGNDNAIAMGTRISKTDDNLLSMAHTFNKGDGNFMLMGHNYGKGDESILSMGQPFDRGDGNFISMGQSYEKEDGSLISLGTSYTKGHESFISMGPTYGKSGENFISVAPYDKGTDHIISMGPTYDKVDSNIAPTVPSYDRRDSSSLPVGQNHHKGQSSTISFGGFHDDPEPNPSGGIISGYDLLIGSQNSAQGLDSQKDLTESNSESLVNSIPKPNTKNDTVAKNKEPKTTKKAPPNNFPSNVKSLLSTGIFDGVQVKYVSWSREKNLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRLWKASYQAATRELQRIYGKDEVSIPS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2678 581 Pfam Tify domain binding domain 474 529 IPR032308 -
Apr4g2678 581 MobiDBLite consensus disorder prediction 340 367 - -
Apr4g2678 581 PANTHER N-LYSINE METHYLTRANSFERASE 1 581 - -
Apr4g2678 581 MobiDBLite consensus disorder prediction 387 423 - -
Apr4g2678 581 MobiDBLite consensus disorder prediction 325 444 - -
Apr4g2678 581 PANTHER AUTOIMMUNE REGULATOR 1 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2678 Apr-Chr4 35458434 35464690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2678 433 562 PHD Transcription Factor Family AT3G53680 55.385 5.53e-41 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2678 - - gmx:100782217 1070.84