Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2674 ATGATGATATCGAGGGGATTGTTCGGGTGGTCCCCGCCGCACGTGCAACCTCTCACGCCCGTGTCCGAGGTTTCCGAGCCGCCGGAGTCTCCGTCGCCGTACCTCGACCCCGGCGCCGAAACCTCCGCGTCGCAGCAGGTGGAGGTTGAGGAGGAGATGGAGGAGCCGGAGGAGATCGAGCCGCCGCCTGCCGCGGTTCCTTTCTCGCGGCTCTTTGCATGCGCCGACAGCTTTGATTGGTTCCTCATGGCCGTCGGTTCCGTCGCCGCCGCGGCTCACGGCACCGCGCTCGTCGTTTACTTGCACTACTTCGCGAAGATTATTCATGTGCTGCGGATGGATCCCCAGCATGGCACGTCGCAGGAGCAATTTCACAGGTTCACAGAGCTTGCTTTAACCATTGTTTATATTGCTGTGGGAGTTTTTGTTGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACGGGAGAACGACAGACTGCTGTCATCAGGTCAAACTATGTTCAAGTATTATTAAATCAAGATATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTGTTGAGTGATGTGCTGCTTATCCAGTCTGCCCTTAGTGAAAAGGTTGGAAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTCATTGGCCTTATCAATTGTTGGCAGATTGCTTTGATAACATTAGCTACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTCCATAGGCTTGCAGAGAATATCCAAGATGCATATGCTGAAGCAGCTAGCATTGCTGAGCAGGCAGTTTCCTATATAAGGACATTGTATGCATTTACAAATGAAACATTGGCCAAATATTCATATGCTACGTCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCGTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTATTCATGAAAAAGCGCATGGTGGTGAAATTATAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGGTTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAGGGGCGAATAGCTGCTTATAGACTATTTGAGATGATAAGTCGGTCATCGTCATCTATTAATCATGATGGTACTGCACCTGATTCTGTGCAAGGAAATATCGAGTTTCGGAATGTTTATTTCAGCTATCTATCTCGGCCTGAAATCCCTATCTTAAGTGGATTTTATCTCACTGTACCTGCTAAGAAAGCTGTAGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCACTAATGGAGCGTTTTTATGATCCTACATTAGGGGAAGTTCTTCTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGCTGAGGAGCCAAATTGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGTTTGAGTATAAGAGATAACATTGCTTATGGGAGGGATGCCAACATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCGTTAGAGAAAGGCTATGACACACAGGTTGGTAGGGCTGGTCTAGCTTTGACTGAGGAGCAGAAAATAAAACTGTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAGGGAGCTCTGGATTTGCTTATGTTGGGACGCTCGACAATAATAATTGCTCGAAGGCTTAGTCTCATAAGGAATGCTGACTATATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCATGATGAATTATTAACCCTGGATGGCTTATACGCGGAACTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCCGTTCGAAACTACAAGGAGACTGCAGTGTTCCAAATTGAGAAGGATTCTTCAGCAAGTCATAGCTTCAAAGAACCATCATCTCCTAAAATGATGAAGTCACCCTCTCTTCAAAGAATATCTAATGTATCCCGACCTCCGGATGGTGTCTTTAACTTGCAAGAATCACCCAAAGTCCGGAGCCCTCCACCGGAGAAGATGCTGGAAAATGGTCAGGCTTTGGATGCCGCTCATAAGGAGCCATCAATAAGGAGGCAGGATAGTTTTGAAATGAGACTGCCAGAGTTACCCAAGATTGATGTTCAGTCTGTGCATCGACAAACATCAAATGATTCTGATCCAGAATCCCCTGTTTCACCTCTTTTAACATCAGATCCTAAAAATGAACGCTCCCATTCACAGACTTTTAGTAGACCACATAGTCATTCTGATGATGTTTCAGTTAAAATGAGAGAAACAAATGGTGCACAGCATCGAAAACCACCATCACTGCAGAAGCTGGCTGAGCTTAGTTTTGCGGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGTTCTTTCAATCCTCTTCTAGCTTATGTTATTGGTCTTGTGGTGACAGCTTACTATAGAATTGATGATCATCACCACCTAGAACGGGAGGTAGACAAGTGGTGCTTGATCATTGGCTGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTAGGATGGTTTGACAATGAGGAAAACAGTGTGGACAATTTGTCCATGCGATTGGCCAATGATGCTACTTTTGTACGAGCTGCTTTTAGCAACAGGCTTTCCATATTTATACAGGATAGTGCTGCAGTTATTGTTGGTCTTCTCATTGGTGCTTTGCTGCACTGGCGATTAGCACTTGTCGCTTTTGCAACCCTTCCAATTCTCTGTGTTTCTGCTATTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGCATCCAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGATGCTGTTAGAAACATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAGCTCTATAGGCTGCAGTTAAAGAAAATATTTAAGCAGAGCTTTCTTCATGGGATGGCAATTGGTTTTGCATTTGGCTTTTCACAGTTTTTACTTTTTGCTTGTAATGCCTTGCTACTTTGGTACACTGCAATATGTATAAAACATGGTTACATGGATCCACCTACTGCACTCAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCTCTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTTAAACGACGAAAATCTCTCATATCAGTGTTTGAAATTATAGATCGTGTGCCTAAAATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTGTATGGCAGCATTGACTTAAAAAATATTGATTTTTGTTACCCATCTCGCCCAGAAGTGTTGGTATTGAGCAATTTTAGTCTCAAAGTCAATGGGGGCCAAACAGTTGCTATTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCTTTGATCGAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTCCTGGACGGGAGGGATTTAAAGCTCTATAACTTAAGGTGGTTGAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATTATATATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCTCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGGTGTCGACTTAACTCCAGGACAGAAACAGAGAATTGCAATTGCAAGGGTGGTGCTAAAAAATGCACCTATCTTATTGTTGGATGAAGCAAGTTCATCAATCGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACGCTAATAATGGGAAACAAGACCACCATTTTAATAGCGCATAGGGCTGCAATGATGAGGCACGTGGACAATATTGTCGTGCTTAATGGAGGACGTATAGTGGAGGAGGGCACTCATGATTCGTTGGTGGCAAAGAATGGTCTGTATGTCCGATTAATGCAACCTCATTTTGGCAAGGCTTTGCGTCAGCATCGGCTTGTTTAG 4212 0.4345 MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQVEVEEEMEEPEEIEPPPAAVPFSRLFACADSFDWFLMAVGSVAAAAHGTALVVYLHYFAKIIHVLRMDPQHGTSQEQFHRFTELALTIVYIAVGVFVAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHEKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSINHDGTAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDANMDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAVFQIEKDSSASHSFKEPSSPKMMKSPSLQRISNVSRPPDGVFNLQESPKVRSPPPEKMLENGQALDAAHKEPSIRRQDSFEMRLPELPKIDVQSVHRQTSNDSDPESPVSPLLTSDPKNERSHSQTFSRPHSHSDDVSVKMRETNGAQHRKPPSLQKLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDDHHHLEREVDKWCLIIGCMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDNEENSVDNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATLPILCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKHGYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDSSALKPPNVYGSIDLKNIDFCYPSRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVFLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLV* 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2674 1403 Gene3D - 397 644 IPR027417 -
Apr4g2674 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g2674 1403 MobiDBLite consensus disorder prediction 668 701 - -
Apr4g2674 1403 CDD ABC_6TM_Pgp_ABCB1_D2_like 826 1137 - -
Apr4g2674 1403 Pfam ABC transporter transmembrane region 836 1100 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g2674 1403 Pfam ABC transporter transmembrane region 86 357 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g2674 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 407 642 IPR003439 GO:0005524
Apr4g2674 1403 MobiDBLite consensus disorder prediction 668 720 - -
Apr4g2674 1403 Gene3D ABC transporter type 1, transmembrane domain 1001 1151 IPR036640 GO:0005524|GO:0016021
Apr4g2674 1403 Gene3D ABC transporter type 1, transmembrane domain 769 999 IPR036640 GO:0005524|GO:0016021
Apr4g2674 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 831 1123 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g2674 1403 PANTHER ABC TRANSPORTER B FAMILY 19 1399 - -
Apr4g2674 1403 SUPERFAMILY ABC transporter transmembrane region 818 1139 IPR036640 GO:0005524|GO:0016021
Apr4g2674 1403 SUPERFAMILY ABC transporter transmembrane region 69 382 IPR036640 GO:0005524|GO:0016021
Apr4g2674 1403 SMART AAA_5 434 747 IPR003593 -
Apr4g2674 1403 SMART AAA_5 1181 1368 IPR003593 -
Apr4g2674 1403 Pfam ABC transporter 428 572 IPR003439 GO:0005524
Apr4g2674 1403 Pfam ABC transporter 1172 1320 IPR003439 GO:0005524
Apr4g2674 1403 MobiDBLite consensus disorder prediction 747 799 - -
Apr4g2674 1403 MobiDBLite consensus disorder prediction 13 60 - -
Apr4g2674 1403 Gene3D ABC transporter type 1, transmembrane domain 70 660 IPR036640 GO:0005524|GO:0016021
Apr4g2674 1403 MobiDBLite consensus disorder prediction 783 799 - -
Apr4g2674 1403 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 382 - -
Apr4g2674 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1143 1390 IPR027417 -
Apr4g2674 1403 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1399 - -
Apr4g2674 1403 Gene3D - 1152 1391 IPR027417 -
Apr4g2674 1403 MobiDBLite consensus disorder prediction 754 782 - -
Apr4g2674 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1154 1391 IPR003439 GO:0005524
Apr4g2674 1403 Coils Coil 253 273 - -
Apr4g2674 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 641 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2674 Apr-Chr4 35425903 35435852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2674 53 699 Calmodulin-binding Proteins AT2G36910 43.645 4.28e-167 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2674 K05658 - gmx:100789116 2573.89