Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g2671 | ATGGTGGGCAACGACGAAGCGTGCCCAATCTCCGCTTCCCGGAAAATGTTCTGGCGGTCGGCGTCGTGGTCCTCTTCCCGCTCCGCCGCCGCCGGAAACAACCCTTCCGGCGAGGCTGCAAAGGGTTTTGCTGATCCCGATTCCGGCGCCGACGCTGCGAACGGGCAGAATCGGCGGTTTCCTCCGCCACCATTGACCCCTCGATCGCAGCAAAATTGCAAGGCTCGGTCGTGTTTGCCGCCGCTGCAGCCCCTTTCCATCGCTCGCCGGAGCTTGGACGAGTGGCCGAAGGCGAGCTCGGACGACATAGGTGAGTGGCCGCAGCCACCCACCACCCCCGGTGGGAGAGGTAATGGTAGTAATGGTGAAAGGTTGAAACTTGATTTGTCTTCAATTCAGCAGAACCCTGATCATAAGAACAATAATGGTGGGCTTGTGAAGAGGGATAAAATTGCTTTTTTTGATAAGGAATGTTCAAAGGTTGCTGATCATGTGTATCTTGGTGGTGATGCTGTTGCTAGGGACAGGGATATTTTGAAACAGAATGGTATCACTCATGTCTTGAATTGTGTGGGTTTTGTGTGTCCTGAGTACTTTAAGGCTGATTTTGTGTATAGGACATTGTGGCTGCAGGATAGTCCCTCTGAGGATATTACTAGTATTTTGTATGATGTGTTTGATTACTTTGAGGATGTCAGGGAAAAAAGTGGGAGGGTGTTTGTACACTGTTGTCAAGGGGTGTCTAGGTCTACCTCTTTAGTGATTGCTTACCTTATGTGGAGGGAAGGTCAGAGTTTTGATGATGCTTTTCAGTTTGTGAAGGCGGCGAGAGGGATTGCGGATCCGAATATGGGTTTTGCTTGCCAGTTGTTACAGTGCCAGAAAAGGGTTCATGCGTTCCCTCTAAGCCCTAGCTCTTTGCTGAGGATGTACAGAATTGCTCCTCACTCACCGTATGATCCTTTGCATCTTGTTCCCAAAATGTTGACGGACCCTTCCTCGTCTGCTCTGGATTCCAGGGGTGCATTTATTATACACATTCCTTCTGCTATATATGTTTGGATTGGTAAGAGTTGTGAGACCATCATGGAAAGGGATGCCAGAGGGGCTGTGGGCCAGATTGTTCGTTATGAAAAAGTACAAGGACCTATAGTAGTGATTAGGGAAGGCGAGGAACCGCCTTATTTTTGGGACGCTTTCTCAAATTTTTTGCCTTTGATGGACAAATCCGGCAATAGAGTAGAAAATAGCAAATCAAGTTTTAAAATTGTGCCTGGTGAGAGGAAAGTGGATGCATATGATGTTGATTTTGAAGTTTTCAAAAAAGCAATCATTGGAGGTTTTGTGCCTCCATTTGCGTCATCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGTTTTAAGGCGTAAAAATTCGTCTCCTAGTATGAAGGAGTTTGTCTCAGCCCCTAAGTTATCCTTTCCCAGGGTCTTTTCAGATTCCATGTTGTGTATTCATACATCAGCAAAGTCATCACCATCTCCATCGCTGTCGTCATCATCATCATCTTTATCATCATCTTCTTCACCATCTTATGTCTCTCCAGATTCAATTTCTTCTGATTCTAGCACTCATTCAAAGTTTTTGTCAGAATTGTCCTTGGATTCTTCAGCTGCAGTTTTGACTTCTGTATCTTCACCTTTGTCTAATTTTTCTAATTTATCTCTGTCATCAAATTCTAGTTCTCCAACAGTGTCTAACACTATAGATATCCATCGTTTCAAGTTATCAGATCCTCATTCTCTGTCAGCCTCTTTATCATTGAAAAAACCATCAACTTCCCTTGCTGAACGCAGAGGGAGTCTGTCAAAATCTTTAAAGCTGCCGGTAATGAATGATAAGACACAAGTAATAGATAAACCTTTGGCTCTTCATGCTAGTCGACAACATGGTGTTGTTAATGGCGATGTTAGCTATTTGCAACAATCAGATAATATAGATTATTTATGTGAGTCTAACAACCGAGCCAAGGATGGAGGTGTGAATTCAATTCAACAGTGTAAGCTGGCATTATGTCCAACCATTGTTGATAGTGTGCACTGCAAGGAATCGTCACTTGTCAGGAACTGTGTTGAGCCTTCGATAGATAGTTTCCCAAGAGAAGACTTAAATTCTACATCATCAAAGGGAACTAATGAGAGTGGCTCATTGCAGTATAGTGTGACACAAGCTTCGGTATATCTCTGGCCCAGTTTAGAAAAGCTTGAGACATTTGGTGCAAGTCATTTGGATTCTAAAGCTGCTTTTGTCATATTATCTCCAAGTATGCCTGTACATGCAGGAAACATTTTATATTTTTGGGTAGGGAGGTCTTTCAATTGTGACACCTCAAAGGCTCCCTTTGATAGTGATAGACAGTCAGATTTTCTAGGAGCTGTTGACTGGAATCGAATTGGTTGTGATCTCCTTGCTCGGTTTAGTTTGTTGAAGAATACAGTCATCAAGATTGTTAAAGAGAATGAAGAACCTCCAGAGTTCCTTGCTTTGCTGAGTTCATTGTAG | 2559 | 0.4392 | MVGNDEACPISASRKMFWRSASWSSSRSAAAGNNPSGEAAKGFADPDSGADAANGQNRRFPPPPLTPRSQQNCKARSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPTTPGGRGNGSNGERLKLDLSSIQQNPDHKNNNGGLVKRDKIAFFDKECSKVADHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKSGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSSSALDSRGAFIIHIPSAIYVWIGKSCETIMERDARGAVGQIVRYEKVQGPIVVIREGEEPPYFWDAFSNFLPLMDKSGNRVENSKSSFKIVPGERKVDAYDVDFEVFKKAIIGGFVPPFASSEDEHETHLPARESSWSVLRRKNSSPSMKEFVSAPKLSFPRVFSDSMLCIHTSAKSSPSPSLSSSSSSLSSSSSPSYVSPDSISSDSSTHSKFLSELSLDSSAAVLTSVSSPLSNFSNLSLSSNSSSPTVSNTIDIHRFKLSDPHSLSASLSLKKPSTSLAERRGSLSKSLKLPVMNDKTQVIDKPLALHASRQHGVVNGDVSYLQQSDNIDYLCESNNRAKDGGVNSIQQCKLALCPTIVDSVHCKESSLVRNCVEPSIDSFPREDLNSTSSKGTNESGSLQYSVTQASVYLWPSLEKLETFGASHLDSKAAFVILSPSMPVHAGNILYFWVGRSFNCDTSKAPFDSDRQSDFLGAVDWNRIGCDLLARFSLLKNTVIKIVKENEEPPEFLALLSSL* | 853 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g2671 | 852 | SMART | dsp_5 | 157 | 296 | IPR020422 | GO:0006470|GO:0008138 | |
Apr4g2671 | 852 | MobiDBLite | consensus disorder prediction | 508 | 530 | - | - | |
Apr4g2671 | 852 | SUPERFAMILY | Actin depolymerizing proteins | 755 | 850 | - | - | |
Apr4g2671 | 852 | SMART | VILL_6 | 306 | 403 | IPR007122 | GO:0051015 | |
Apr4g2671 | 852 | Gene3D | Severin | 308 | 404 | IPR029006 | - | |
Apr4g2671 | 852 | Gene3D | Protein tyrosine phosphatase superfamily | 132 | 299 | IPR029021 | - | |
Apr4g2671 | 852 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 241 | 251 | IPR016130 | GO:0016311|GO:0016791 | |
Apr4g2671 | 852 | MobiDBLite | consensus disorder prediction | 19 | 80 | - | - | |
Apr4g2671 | 852 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 157 | 299 | IPR020422 | GO:0006470|GO:0008138 | |
Apr4g2671 | 852 | MobiDBLite | consensus disorder prediction | 19 | 33 | - | - | |
Apr4g2671 | 852 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 216 | 277 | IPR000387 | GO:0016311|GO:0016791 | |
Apr4g2671 | 852 | SUPERFAMILY | Actin depolymerizing proteins | 304 | 409 | - | - | |
Apr4g2671 | 852 | Pfam | Dual specificity phosphatase, catalytic domain | 165 | 295 | IPR000340 | GO:0008138|GO:0016311 | |
Apr4g2671 | 852 | MobiDBLite | consensus disorder prediction | 93 | 124 | - | - | |
Apr4g2671 | 852 | PANTHER | MKPA PROTEIN | 1 | 845 | - | - | |
Apr4g2671 | 852 | CDD | DSP | 158 | 292 | - | - | |
Apr4g2671 | 852 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE MKP1 | 1 | 845 | - | - | |
Apr4g2671 | 852 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 151 | 298 | IPR029021 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g2671 | Apr-Chr4 | 35407920 | 35412635 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g2671 | 2 | 193 | Protein tyrosine phosphatase (PTP) family | AT3G55270 | 61.979 | 1.81e-66 | 235 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g2671 | - | - | mtr:MTR_7g023250 | 1226.46 |