Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2655 ATGGATTTTTCTTCTTTCATCTCTCACTTCAACTGCTTCAGAGCCTCTGCCAATTCGTTTCTCTCTCAATACGAACCTCTCGCTCTGCTTCTCCTTCCTCTGTTCTCTATCCTTCTCGCTCACTCTCTTCGTTCCTTCTTCAACCTCCTCCTCGATAAAGGACTCAAAGCTACACTCCTAGGGTTTCTCATTAACTCTGTCAAATTGATCCCTGGCGTGAAGAGATATATAGATGCGGAGAAACGGAAGGTTGTGGATAAGCTGCAGTCTGATAGTAAATCTAAAAGAGAAGGTTGGGAAACTGAGTTGCCAAGCATAGGATTAGGGACATCTGTCCTTGAAAAAATGACAGAAGAGAAAAGAAATGATGCAGTTTGGCGAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATCTGATGGACATTTTTCTCTGATAAATGAGGCATGTTCAATGTTCGCACATACCAATCCCCTGCATTTGGATGTATTCCAGAGTGTTGTGCGCTTTGAGGCAGAAGTGGTTGCAATGACAGCTTCACTTCTTGGAGGTAAGGAAAAGAGTTCTGGAGGACAAATATGTGGCAACATGACATCAGGGGGGACTGAAAGTATATTATTAGCGGTCAAATCATCCCGTGACTATATGAGATCTATGAAAGGAATTAGAAGACCTGAAATGGTAATTCCTGAGTCTGGACACTCAGCGTATGACAAGGCCGCACAGTATTTTAATATCAAACTATGGCGTATTCCCGTTAACAAAAATTTTCAAGCTGATGTGAAAGCAATTCGACGTCATATTAACAAAAATACCATTTTGATAGTTGGATCTGCTCCTGGCTTTCCTCATGGAATAATTGACCCCATCAAAGAACTTGGTCATCTGGCATCAATCTTTGGTATTTGTTTCCATGTGGATCTTTGCCTTGGTGGCTTTGTATTACCTTTTGCGCGTGAGCTTGGGTACCAAATTCCACCTTTTGATTTTTCTGTTAAAGGGGTTTCTTCAATATCAGTGGATGTGCATAAATATGGTTTAGCTCCCAAAGGAACAAGTGTAGTTCTGTATAGGAACCATGAAATCAGAAAGCATCAATTTGTTGCTGTTACTGAATGGTCTGGTGGGTTGTACGTGTCTCCCACCATAGCTGGAAGCAGGCCTGGAAGTCTTATTGCTGGTGCATGGGCAGCAGTGATGTCTCTAGGGAAAGAAGGTTACTTGGAAAATACAAAAGCAATTATGGAAGGGTCAAGAAAAATACAGAAAGGCATTGAGGAGATAGCTGAATTGTTTATTGTTGGAAGACCAGACATGACGATTGTGGCTTTTGGATCTGATGTTCTGGATATATTTGAAGTCAATGATGTTATGTCATCCAAAGGGTGGCACTTAAATGCATTGCAGAGACCCAACAGCATCCATATCTGTGTGACACTACAACATGTACCAATTGTTGACGACTTTCTCAAGGATTTGAAGGAATCTGTGAAAACTGTGAAAGAGAATCCAGGTCCAATAAGTGGAGGCCTAGCACCTATATATGGCGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTTTATGGACGGTACCTGCTAG 1626 0.4225 MDFSSFISHFNCFRASANSFLSQYEPLALLLLPLFSILLAHSLRSFFNLLLDKGLKATLLGFLINSVKLIPGVKRYIDAEKRKVVDKLQSDSKSKREGWETELPSIGLGTSVLEKMTEEKRNDAVWRGKCSGTVYIGGSESDGHFSLINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTASLLGGKEKSSGGQICGNMTSGGTESILLAVKSSRDYMRSMKGIRRPEMVIPESGHSAYDKAAQYFNIKLWRIPVNKNFQADVKAIRRHINKNTILIVGSAPGFPHGIIDPIKELGHLASIFGICFHVDLCLGGFVLPFARELGYQIPPFDFSVKGVSSISVDVHKYGLAPKGTSVVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAVMSLGKEGYLENTKAIMEGSRKIQKGIEEIAELFIVGRPDMTIVAFGSDVLDIFEVNDVMSSKGWHLNALQRPNSIHICVTLQHVPIVDDFLKDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDFMDGTC* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2655 541 Gene3D Aspartate Aminotransferase, domain 1 110 504 IPR015422 GO:0003824
Apr4g2655 541 SUPERFAMILY PLP-dependent transferases 124 504 IPR015424 -
Apr4g2655 541 Pfam Pyridoxal-dependent decarboxylase conserved domain 156 446 IPR002129 GO:0016830|GO:0019752|GO:0030170
Apr4g2655 541 Gene3D - 138 405 IPR015421 GO:0003824
Apr4g2655 541 Gene3D - 102 538 - -
Apr4g2655 541 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 21 541 - -
Apr4g2655 541 PANTHER - 21 541 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2655 157 501 Calmodulin-binding Proteins AT3G17760 26.027 4.19e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2655 K01634 - gmx:100794743 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2655 4 35291798 35298858 Apr4g2655 4 35291798 35298858 ECH