Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2651 ATGGCGGACGCTGTTGTTAGCCCCCTCCTTCAGAACTTGTCACAGCTTCTGCGCGATGAATTCAAGTTGCTTTCGGGCGTTGAGGACAAAATCAAGTTCCTCTGCGATGAGCTCAAGTTTATACACGTCTTCCTCAAGAGCTCCATTGGTAAGCGCAACGACGAGCTTGTCAAAGAAGTGGTCAACCAAATCAGAGATGTTGGCTTTAAGGCCGAGGATGTTGTTGACATCTATGTTGCCAGCGTCGCCCAACATAGAAGCAGAAACATAATCTGCAGGCTGTTTCATTTAAGACAACGTGTCATGGTGCTTCGTGAAGTCAATAATGAGATAGAGAAGATCAAGAACCGTATTGATGAGATCTATAAAAACAGGGAGAGATACGGCATCACAGAAGGTGCATCCACAAGTGAAGATGTTGATGCTATTGCTGCTGAATCACTCCGCGAAAGGAGGAAGGACGTGGAAGAAAAAGACGTAGTGGGGTTCGTGAATGACTCAAACTATGTGATTAAGAAGCTCATGCAAGAAGGTGATTCAGGTCGCAAAGTTGCTTCCATAATCGGCATGGGAGGGTTGGGTAAGACCACACTTGCCCGGAAGATTTATAACAATGATCAAGTGAAGAACAGCTTCCCCACTCGTGCATGGGGTTATGTTTCCAACGATTATAGAGCAAGGGAGTTTTTGCTGAGCCTTCTCAAGTGTTTGCTGTCCACATCGGAATATGATGGTTTGTTCAAGAAGAAGGAATATGAAGTTGAAGCTATTGTTTCAAGTGAGGAAATACTGAAGACAAAGGTGAAAGAATGTTTGAAGGGGAAGAAGTACCTAATAGTGCTTGATGATATATGGAAAACTCAAGTGTGGAACAAGATACAAGATGCCTTCCCAGATGATGACCACAGCATTGGCAGAATACTGATAACTAGTCGTGAAATGGAGGTCGCAAACTATGTAGGAACCACATCTCCCTACTATCTTCCCTTCCTCAATGAAGAAGAAAGTTGACAACTCTTTTCTAAGAAAGTGTTTCGAAGTAAAGAGTGTCCTCATGATCTCGAGCCTATCGGTAAATCCATTGTTGAGAGTTGCAAGGGCTTGCCACTTGCCATTGTGGTCTTAGCGGGACATGTTGCAAAGAAGGAGAAATCACAAAGAGAGTGGACAAGAATCAAGAACATCACTTGGCATCTTACTCAAGACAAGATGGAAGTGATGGATATACTGAAGCTTAGCTACGACAGCCTGCCTCAAAGATTGAAGCCATGCTTTCTGTATTTTGGAATCTATCCTGAGGACTATGAGATAAGGGCCAGGGATGTGATCCAAATGTGGATGGCTGAAGGGTTCATTCAACCACATGAAGCTGGAATCCCAAGTGCAGCTGAACCAGAAGATGTTGCAGAGTACTACTTGGATGAGCTAGTGGATCGGAGCTTGGTGCAAGTGGCAAGCAAGAAGAGCGATGGGCGTGTCAAGACATGTCGAATTCATGATCTTCTCCGCGATCTCTGCATTTCAGAGAGCAAATCAGAGAAGTTTGTGGAGGTTTGCAGAGATCCGAACGACATGGATACCCTGAGCAATGATAACCCTCGTAGATTGTCCATCCAATGCAAGGAATGGTCTAATTTCTCTACAAACAATTTGAATCAGTTGTGCACTCGTTCCTTGTTCTTCTTTTATGAGGGGGAAGAGTTCCCAGAGGATGTTCTTCTGAAAAGCTTCAAGTTGGCTCGCGTGATATATTTCAAAACCGAAGGACACTACTATAAGTCAGCAGCCATGACTGATTTCAAGAAAATGATCCATCTAAGGTACTTGAGAATAGATAAAACGGTGATTAGCATTCCAGCTTCTGTACGCAACCTCAGGAATCTAGAAACCTTGATGTACGACATGTAA 1908 0.4382 MADAVVSPLLQNLSQLLRDEFKLLSGVEDKIKFLCDELKFIHVFLKSSIGKRNDELVKEVVNQIRDVGFKAEDVVDIYVASVAQHRSRNIICRLFHLRQRVMVLREVNNEIEKIKNRIDEIYKNRERYGITEGASTSEDVDAIAAESLRERRKDVEEKDVVGFVNDSNYVIKKLMQEGDSGRKVASIIGMGGLGKTTLARKIYNNDQVKNSFPTRAWGYVSNDYRAREFLLSLLKCLLSTSEYDGLFKKKEYEVEAIVSSEEILKTKVKECLKGKKYLIVLDDIWKTQVWNKIQDAFPDDDHSIGRILITSREMEVANYVGTTSPYYLPFLNEEES*QLFSKKVFRSKECPHDLEPIGKSIVESCKGLPLAIVVLAGHVAKKEKSQREWTRIKNITWHLTQDKMEVMDILKLSYDSLPQRLKPCFLYFGIYPEDYEIRARDVIQMWMAEGFIQPHEAGIPSAAEPEDVAEYYLDELVDRSLVQVASKKSDGRVKTCRIHDLLRDLCISESKSEKFVEVCRDPNDMDTLSNDNPRRLSIQCKEWSNFSTNNLNQLCTRSLFFFYEGEEFPEDVLLKSFKLARVIYFKTEGHYYKSAAMTDFKKMIHLRYLRIDKTVISIPASVRNLRNLETLMYDM* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2651 634 Pfam Rx N-terminal domain 5 87 IPR041118 -
Apr4g2651 634 Gene3D - 418 507 IPR036388 -
Apr4g2651 634 Gene3D - 139 324 IPR027417 -
Apr4g2651 634 PRINTS Disease resistance protein signature 184 199 - -
Apr4g2651 634 PRINTS Disease resistance protein signature 364 378 - -
Apr4g2651 634 PRINTS Disease resistance protein signature 271 285 - -
Apr4g2651 634 PRINTS Disease resistance protein signature 622 634 - -
Apr4g2651 634 PANTHER DISEASE RESISTANCE PROTEIN RP 52 630 IPR044974 GO:0006952
Apr4g2651 634 PANTHER - 52 630 - -
Apr4g2651 634 Pfam NB-ARC domain 168 414 IPR002182 GO:0043531
Apr4g2651 634 Coils Coil 104 124 - -
Apr4g2651 634 Gene3D - 331 417 IPR042197 -
Apr4g2651 634 CDD RX-CC_like 2 121 IPR038005 -
Apr4g2651 634 Gene3D - 5 118 - -
Apr4g2651 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2651 Apr-Chr4 35260046 35261953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2651 171 504 WRKY Transcription Factor Family AT5G45050 26.409 1.92e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2651 - - aprc:113862578 1255.74