Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2650 ATGGTGGACGCTACTGTTAGCTTCCTGCTACAGAACTTGTCACGGCTTCTTGAGGATGAAATAAAGTTGCTTTCGGGCGTTAAGAACAAAATCAACTTACTGAGCAATGAGCTCAGGTTTTTAAAGATCTTCCTCAAAGACTCCACAGGCAAGCGCAGTGATGAGGTTGTCAAAGAAGTGGTCAACCAAATCAGAGATGTTGTCTTTATGGCCGAGGATGTTGTTGACATCTACGTTGCCAGCGTCGCCAAACATAGGAGCAGAAACATAGTAAGCAAGTTGTTCCACTTGAAACAACGTGTCATGGTGCTTCAGGACGTGGATGCTGAGATAGAGAACATCAAGAACCGTATTGATGAGATCTATAAAAACAGGGAGAGATACGGCATCACAGAAGGTGCATCCACACGTGAAGATGTTGATGCTATTGCTGCTGAATCACTCCGCGAAAAGAGGAAGGACGTGGAAGAAAAAGACGTAGTGGGGTTCGTGAATGACTCAAACTCTGTGATTAAGGAGCTCATGGAAGAAGGTGATTCAGGTCGCAAAGTTGCTTCCATAATCGGCATGGGAGGGTTGGGTAAGACCACTCTTGCCCGGAAGATTTATAACAACGAACAAGTGAAGAAGTGCTTTACTCTTCGTGCATGGGGTTATGTTTCCAACGATTACAGAGCGAGGGAGCTTTTGCTGAGCCTTCTCAAATGTTTGCTGTCCACATCTGAATATGATGATTTGTTCAAGAAGAAGGAATATGAAGTTGAAGCTATTGCTACAAGTGAGGAAAAACTGAAGACAAAAGTGAGAGAATACTTGAAGGGGAAAAAGTACCTTGTAGTGCTCGATGATATATGGAAAACTGAAGTGTGGGACAGCATAGCGGATGCCTTTCCAGACGATGATCACAGCATTGGCAGAATACTGATAACTAGCCGTGGAGTGGAAGTCGCAAACTATGTAGGAACCACATCTCCCTACCATCTTCCCTTCCTCAACAAAAAAGAAAGTTGGCAACTTTTTTCTAAGAAAGTGTTTCAAGGTAAAGGGTGTCCTCCTGATCTGGAGCCTCTCGGCAAATCTATTGTTGAGAGTTGCAAGGGCTTGCCACTTGCCATTGTGGTCTTGGCAGGATATGTGTCGAAGAAAGAGAAGTCAGAAAGAGAGTGGACAAGAATCAAGAACATCACTTGGCATCTTACTCAAGACAAAATGGAAGTGATGGATATACTAAAGCTTATCTACGACAGCCTGCTTCAAAGATTGAAGCCGTGCTTTCTGTATTTTGGAATCTATCCCGAGGACTATGAGATCAGGGCGAGGGATGTGATCCAAATGTGGATGGCTGAAGGGTTCATTCAACCGCAAGAAGCTGGAATCCAAGGTGCAGCTGAACCAGAGGATGTTGCAGAGTACTACCTGGATGAGCTAGTGGATCGCAGCTTAGTGCAAGTGGCAAGCAGGAAGAGCGATGGGCGTGTCAAGACATGTCGAATTCATGATCTTCTTCGCGATCTCTGCATATCAGATAGCAAATCTGAGAAGTTTATGGAGATTTGCACAGATCCCAACAACGTGGATACCCTGAGCAATGCTAATCGTAGATTGTCCATCCAATGCAAGAAATCATCTACTGTGTCTATAAACAATTTGAATCAGTTGTGCACTCGTTCCTTGTTCTTCTTTTCTGAGGGGAAAAAGTTCCGAGAGGATGTTCGTCTGAATAGCTTCAAGTTGGCTCGCGTGATATATTCAAACACCGAAGGTTACTATAATTCAGCACTCATGATTGATTTCAAGAAAATGATCCATCTAAGGTACTTGAGAATAGATGCAGGGATCAGTAGCATTCCAGCTTCTATACGTAACCTCAGGAATCTAGAAACACTCGAGGTACGAAAAGCAGAGTGGGTCTCCAACGAAATCTGGAAGCTCAAGCGACTGAAACTTCTTTATATAAGGGATGTTAAGAAGATACAAATCCTACCAAAATCACAAAGGAAAATAAAGGGAAACTTGCAAACCCTCTTTCTAAGCTGTTTTGAGCGTGAAGATTTGGTGTCCCTGCTAAACAATGGGATATTTTCCAGGTTGAGAAAATTAGTGTTATTTTCTGAGAATGATTATCCGCAAGTACGTAAGCCCGTACTAAGTCTAAACCACCTCACCAATCTCCATAGCCTCAAAATTAATAACTTCCTAGAACTTCCGTCAGTCGGAAATGTGTTTCCATCAAATCTTAAAAAGATAACCCTCCATGTTTTCATGCATCCGGGGAATGTATTCATATTTTTGAAGAATATGAAGACTGTAGGACAGCTTGCCAGACTCCAAATTTTGAAACTAAAGGGGAATTATTATGGTGATCCTTTAAATCACCTCACGGTTGGCGCTGGAGAGTTCCCACGACTAAAAGTGTTTCAGATGAGTGGAGTGGGTGTCATCAGATGGAGATTAGAGAAAGGTGCAATGCCGCGTCTCCAAAATCTGGTCATCAAGAACTGCGATGAGCTGGAAGAGATTCCTGAACAACTCTGGTCGTTGACTACCTTACGAGAAGTGCATGTTTCGAACCCCAACCGAAGATTAGCTCACAGACTCCGAAGCGTTGGGTTGAAGAACGGTTGTAAGCTCATACTCTCGGAACTTAGGTCCGAAGAAGAGGGTATAAATTAA 2673 0.4321 MVDATVSFLLQNLSRLLEDEIKLLSGVKNKINLLSNELRFLKIFLKDSTGKRSDEVVKEVVNQIRDVVFMAEDVVDIYVASVAKHRSRNIVSKLFHLKQRVMVLQDVDAEIENIKNRIDEIYKNRERYGITEGASTREDVDAIAAESLREKRKDVEEKDVVGFVNDSNSVIKELMEEGDSGRKVASIIGMGGLGKTTLARKIYNNEQVKKCFTLRAWGYVSNDYRARELLLSLLKCLLSTSEYDDLFKKKEYEVEAIATSEEKLKTKVREYLKGKKYLVVLDDIWKTEVWDSIADAFPDDDHSIGRILITSRGVEVANYVGTTSPYHLPFLNKKESWQLFSKKVFQGKGCPPDLEPLGKSIVESCKGLPLAIVVLAGYVSKKEKSEREWTRIKNITWHLTQDKMEVMDILKLIYDSLLQRLKPCFLYFGIYPEDYEIRARDVIQMWMAEGFIQPQEAGIQGAAEPEDVAEYYLDELVDRSLVQVASRKSDGRVKTCRIHDLLRDLCISDSKSEKFMEICTDPNNVDTLSNANRRLSIQCKKSSTVSINNLNQLCTRSLFFFSEGKKFREDVRLNSFKLARVIYSNTEGYYNSALMIDFKKMIHLRYLRIDAGISSIPASIRNLRNLETLEVRKAEWVSNEIWKLKRLKLLYIRDVKKIQILPKSQRKIKGNLQTLFLSCFEREDLVSLLNNGIFSRLRKLVLFSENDYPQVRKPVLSLNHLTNLHSLKINNFLELPSVGNVFPSNLKKITLHVFMHPGNVFIFLKNMKTVGQLARLQILKLKGNYYGDPLNHLTVGAGEFPRLKVFQMSGVGVIRWRLEKGAMPRLQNLVIKNCDELEEIPEQLWSLTTLREVHVSNPNRRLAHRLRSVGLKNGCKLILSELRSEEEGIN* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2650 890 Gene3D - 413 509 IPR036388 -
Apr4g2650 890 PRINTS Disease resistance protein signature 184 199 - -
Apr4g2650 890 PRINTS Disease resistance protein signature 271 285 - -
Apr4g2650 890 PRINTS Disease resistance protein signature 365 379 - -
Apr4g2650 890 PRINTS Disease resistance protein signature 621 637 - -
Apr4g2650 890 PANTHER - 42 879 - -
Apr4g2650 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 428 IPR027417 -
Apr4g2650 890 Gene3D - 142 324 IPR027417 -
Apr4g2650 890 CDD RX-CC_like 3 121 IPR038005 -
Apr4g2650 890 Gene3D - 330 412 IPR042197 -
Apr4g2650 890 PANTHER DISEASE RESISTANCE PROTEIN RP 42 879 IPR044974 GO:0006952
Apr4g2650 890 Gene3D - 4 107 - -
Apr4g2650 890 Gene3D Ribonuclease Inhibitor 538 868 IPR032675 -
Apr4g2650 890 SUPERFAMILY L domain-like 487 857 - -
Apr4g2650 890 Pfam Rx N-terminal domain 6 88 IPR041118 -
Apr4g2650 890 Coils Coil 104 124 - -
Apr4g2650 890 Pfam NB-ARC domain 168 415 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2650 Apr-Chr4 35230799 35233754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2650 183 505 WRKY Transcription Factor Family AT5G45050 25.538 3.05e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2650 - - aprc:113862567 1184.47