Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2648 ATGGCGGACGCCGTTGTTAGCCCCCTCCTTCAGAACTTGTCACAGCTTCTGCGCGATGAATTCAAGTTGCTTTCGGGCGTTGAGGACAAAATCAAGTCCCTCTGCAATGAACTCAAGTTTATAGACATCTTCCTCAAGAGCTCCATTGGTAAGCGCAACGACGAGCTTGTCAAAGAAGTGGTCAACCAAATCAGAGATGTTGGCTTTAAGGCCGAGGACGTTGTTGGCATCTATGTTGCCAGCGTTGCCCAACATAGAAGCAGAAACATAATCTGCAGGTTGTTCCATTTAACACAACGTGTCATGGTGCTTCGTGAAGTAAATGATGAGATAGAGAACATCAAGAACCGTATTGATAAGATCTATAAAAACAGGGAGAGATACGGCATCACAGAAGGCGCATCCACAAGTGAAGATGTTGATGCTATTGCTGCTGAATCACTCCGCGAAAGGAGGAAGGACGTGGAAGAAAAAGACGTAGTGGGGTTCGTGAATGACTCAAACTCCGTGATTGAGAAGCTCATGCAAGAAGGTGATTCAGGTCGCAAAGTTGCTTCCATAGTCGGCATGGGAGGGTTGGGTAAGACCACTCTTGCCCGTAAGATTTATAACAATGATCAAGTGAAGAACAGCTTTCCTACTCGTGCATGGGGTTATGTGTCCAACGATTACAGAGCGAGGGAGCTTTTGCTGAGCCTTCTCAAGTGTTTTCTGTCCACATGGGAATATGATGATTTGTTCAAGAAGAAGGAAGATGAAGTTGAAGCTATTGCTACAAGTGAGGAAAAACTGAAGACAAAGGTGAGAGAATGCTTGAAGGGGAAGAAGTACCTAATAGTGCTTGATGATATATGGAAAACTCAAGTGTGGAACAAGATAAAGGATGCCTTCCCAGATGATGATCACAGCATTGGCAGAATACTGATAACTAGTCGTGAAATGGAGGTCGCAAACTATGTAGGAACCACATCTCCCTATCATCTTTCCTTCCTCAACAAAGAAGAAAGTTGGCAACTCTTTTATAAGAAAGTGTTTCGAGATAAAGGGTGTCCTCCTGATCTTGAGCCTCTCGGCAAATCCATTGTTGAGAGTTGCAAGGGCTTACCACTTCCCATTGTGGTCTTAGCAGGACATGTTGCAAAGAAGGAGAAATCACAAAGAGAGTGGACAAGAATCAAGAACATCACTTGGCAGCTTACTCAAGACAAGATGGAAGTGATGGATATACTGAAGCTTAGCTACGACAGCCTGTCTCAAAGATTGAAGCCATGCTTTCTGTATTTTGGAATCTATCCTGAGGACTATGAGATCAGGGCCAGGGATGTGATCCAAATGTGGATGGCTGAAGGGTTCATTCAACCACGTGAAGCTGGAATCCAAGGTGCAGCTGAACCAGAAGATGTTGCAGAGTACTACTTGGATGAGCTAGTGGATCGGAGCTTGGCGCAAGTGGCAAGCAGGAAGAGCGATGGGCGTGTCAAGACATGTCGAATTCATGATCTTCTCCGCGATCTCTGCATTTCAGAGAGCAAATCAGAGAAGTTTGTGGAGGTTTGCAGAGATCCGAACGACATGGATACCCTGAGCAATGATAACCCTCGTAGATTGTCCATCCAATGCAAGGAATGGTCTAATTTCTCTACAAACAATTTGAATCAGTTGTGCACTCGTTCCTTGTTCTTCTTTTATGAGGGGGAAGAGTTCCCAGAGGATGTTCTTCTGAAAAGCTTCAAGTTGGCTCGCGTGATATATTTCAAAACCGAAGGACACTACTATAAGTCAGCAGCCATGACTGATTTCAAGAAAATGATCCATCTAAGGCACTTGAGAATAGATAAAACGGTGATTAGCATTCCAGCTTCTGTACGCAACCTCAGGAATCTAGAAACACTCGATGTAGGCGGGGCAGAGATGGTCTCCAACGAAATTTGGAAGCTCAAGCAACTGAAACATCTTTATATAAGGATGTATGCTTGGAAGGTAGAAATCCTACCGAAATTACAAAGGAAAATAAAGGGAAACTTGCAAACCCTCTTTTTAAGATGTTTTGAGGGTGAAGATTTGGTGTCCCTGCTAAACAATGACATATTTCCCAGGTTGAGAAAATTAATGTTTTCTTCGTATAATACTTCCCACGAACCCTTACCTAGTCTAAACCACCTCACCAATCTCCATAGCCTCAAAATTAATAACTGCCTAGAACTTCCATCAGACGCAAATGTTCCATCAAATCTTACCAAGATAACCCTCCAAGATTTCTCAGATCCGGTGAATGAACTCATATTTTTGAAGAATATGAAGATTGTAGGGAAGCTTGCCAGCCTCCAAGTTTTGAAACTAAAAGAGAATTATTTTAATGATGTTTTAAATGACCTTAAGGTTGGCGCTGGAGAGTTCCCACAACTAAAAGTGTTTAAGATGAGTTCAGTTAAGGTCAAAAGTTGGAGATTAGAGAAAGGTGCAATGCCGTGTCTCCAAAATCTGGTCATCAAGAACTGCCGTTGGTTGGAAGAGATTCCTGAAGAACTCTGGTCGTTGACTACCTTACGAGAAGCGCAGGTTTTGAACCCCAACAAAGAATTATCTGACAGACTCCGAAATGTGGAGTTGAAGAACGGTTGTAAGCTCATACTCTCGGGCCTTGCTTGGGAACTTACGTCCGAAGAAGAGGATATAAATTAA 2682 0.4318 MADAVVSPLLQNLSQLLRDEFKLLSGVEDKIKSLCNELKFIDIFLKSSIGKRNDELVKEVVNQIRDVGFKAEDVVGIYVASVAQHRSRNIICRLFHLTQRVMVLREVNDEIENIKNRIDKIYKNRERYGITEGASTSEDVDAIAAESLRERRKDVEEKDVVGFVNDSNSVIEKLMQEGDSGRKVASIVGMGGLGKTTLARKIYNNDQVKNSFPTRAWGYVSNDYRARELLLSLLKCFLSTWEYDDLFKKKEDEVEAIATSEEKLKTKVRECLKGKKYLIVLDDIWKTQVWNKIKDAFPDDDHSIGRILITSREMEVANYVGTTSPYHLSFLNKEESWQLFYKKVFRDKGCPPDLEPLGKSIVESCKGLPLPIVVLAGHVAKKEKSQREWTRIKNITWQLTQDKMEVMDILKLSYDSLSQRLKPCFLYFGIYPEDYEIRARDVIQMWMAEGFIQPREAGIQGAAEPEDVAEYYLDELVDRSLAQVASRKSDGRVKTCRIHDLLRDLCISESKSEKFVEVCRDPNDMDTLSNDNPRRLSIQCKEWSNFSTNNLNQLCTRSLFFFYEGEEFPEDVLLKSFKLARVIYFKTEGHYYKSAAMTDFKKMIHLRHLRIDKTVISIPASVRNLRNLETLDVGGAEMVSNEIWKLKQLKHLYIRMYAWKVEILPKLQRKIKGNLQTLFLRCFEGEDLVSLLNNDIFPRLRKLMFSSYNTSHEPLPSLNHLTNLHSLKINNCLELPSDANVPSNLTKITLQDFSDPVNELIFLKNMKIVGKLASLQVLKLKENYFNDVLNDLKVGAGEFPQLKVFKMSSVKVKSWRLEKGAMPCLQNLVIKNCRWLEEIPEELWSLTTLREAQVLNPNKELSDRLRNVELKNGCKLILSGLAWELTSEEEDIN* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2648 893 PANTHER DISEASE RESISTANCE PROTEIN RP 33 878 IPR044974 GO:0006952
Apr4g2648 893 Pfam NB-ARC domain 168 415 IPR002182 GO:0043531
Apr4g2648 893 SUPERFAMILY L domain-like 487 850 - -
Apr4g2648 893 CDD RX-CC_like 2 121 IPR038005 -
Apr4g2648 893 Gene3D - 330 418 IPR042197 -
Apr4g2648 893 Gene3D - 136 325 IPR027417 -
Apr4g2648 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 428 IPR027417 -
Apr4g2648 893 PRINTS Disease resistance protein signature 184 199 - -
Apr4g2648 893 PRINTS Disease resistance protein signature 271 285 - -
Apr4g2648 893 PRINTS Disease resistance protein signature 365 379 - -
Apr4g2648 893 PRINTS Disease resistance protein signature 623 639 - -
Apr4g2648 893 Gene3D - 5 107 - -
Apr4g2648 893 Gene3D Ribonuclease Inhibitor 766 871 IPR032675 -
Apr4g2648 893 Gene3D Ribonuclease Inhibitor 593 765 IPR032675 -
Apr4g2648 893 Coils Coil 104 124 - -
Apr4g2648 893 Gene3D - 419 508 IPR036388 -
Apr4g2648 893 Pfam Rx N-terminal domain 5 87 IPR041118 -
Apr4g2648 893 PANTHER - 33 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2648 Apr-Chr4 35222477 35225158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2648 171 505 WRKY Transcription Factor Family AT5G45050 24.556 1.38e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2648 - - aprc:113862567 1234.17