Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2647 ATGGCGGACGCTGTCGTTAGCTCCCTCCTTCAGAACTTGTCACAGCTTCTGCGCGATGAATTCAAGTTGCTTTCGGGAGTGAAGGACAAAATAAATTCACTTAGGAATGACCTCAGGTTTATAGACATCTTCCTCAAGAGATCGATGGATAACCGCAACGACGACCTTGTCAAAGAAGTGGTCAATCAAATCAGAGATGTTGCCTTTAAGGCCGAGGATGTTGTTGACATCTACGTTGCCACTATTGCCGAACATAGAAGCAGAAACATAGTGAGCAAGTTATTCCATTTAAAAGAACGTTTCATGGTGCTTCACGAAGTCAATGATGAGATAGAGAAGATCAAGAACCGTATTGAAGAGATCTATAAAAACAGGGAGAGATACTGTATCACAGAACGTGCATCCACAAGTGAAGATGTTGATGCTATTGCTGCTAAATCACTCCGCGAAAGGAGGAAGGACGTGGAAGAAAAAGACGTAGTGGGGTTCGTGAATGACTTAAACTTCGTGATTGAGAAGCTCGTGGAAGAGGGTGATTCAGGTCGCAAAGTTGCTTCGATAGTCGGCATGGGAGGGTTGGGTAAGACCACTTTTGCCCGAAAGATTTATAACAACGAACAAGTGAAGAAGTGCTTTCCTCTTCGTGCATGGGGTTATGTGTCCAACGATTACAGAGCGAGGGAGCTTTTGCTGAGCCTTCTCAAGTGTTTGCTGTCCACATCTGAATATGATGATTTGTTCAAGAAGAAGGAAGATGAAGTTGAAGATATTGCTGGAAGTGAGGAAAAATTGAAGACAAAGGTGAGAGAATGCTTGAAAGGGAAGAAGTACTTTGTAGTGCTTGATGATATATGGAACACTGAAGTGTGGAACAGCATAGAGGATGCCTTCGCAGACGATGATGATGGCAGCGTTGGCAGAATACTAATAACTAGTCGTGAAATGGAAGTTGGAAACTATGTTGGAACCATATCTCCCTATCACCTTCCCTTTCTCAGTGTAGAAGAAAGTTGGCATCTCTTCTCTAAGAAAGTGTTTCGAGGTAATGAGTGTCCGTCAGATCTCGAGCCTCTCGGTAGATCCATTGTTGAGAGTTGCAAGGGCTTGCCACTTGCTATTGTGGTCTTAGCGGGACATGTTGCAAAGAAGGAGAAATCACAAAGAGAGTGGACAAAAATCAAGAACATCACTTGGCATCTTACTCAAGACAAGATTCAAGTTATGAATATACTAAGGCTTAGTTATGACAGCTTGCCTCGAAGATTGAAGCCATGCTTTCTGTATTTTGGAATCTACCCTGAGGACTATGAGATCAGGGCGAGGGATGTAATCCAAATGTGGATAGCTGAAGGGTTCATTCAACTACATGAAGCTGGAATCCCTAGTCCAGCAGAACCAGAAGATGTTGCAGAGTGCTACTTGGATGAGCTAGTGGATCGCAGCTTGGTGCAAGTGGCAAGCAGGAAGAGTGATGGGCGTGTCAAGACATGTCGAATTCATGATCTTCTCCGCGATCTCTGCATTTCAGAGAGCAAATCTGAGAAGTTTATGGAGGTTTGCACAGATCCCAACGACATGGATACGCTGGGCAATGCTACCCCTCGTAGATTGTCCATCCAATCCAAGGTAACGTCTAATGAGTCTGGATACAATGCGAATCTATCATGCGCTCGTTCCTTTTTCTTCTTTTCCGACGAGACCGACTACTCAATGGATCTTGGTGAGAAAAGCCTCAAGTTGGCTCGCGTTGTTTATTTAAAATGCGAGCAATTCTGCCTATTTTCACTACCTCCTGTTGATAGGAAAATGGTCCATCTAAGGTACTTGAGAGTAGATAAAATGGACCTTAGCATTCCAGCTTCCATACGCAACCTCATGAATCTAGAAACCCTTGATGTACGTTTTGCAGAGATGGTCTCCATCGAAATTTGGAAGCTCAAGCGACTGAAACATCTTTATATAAGGAGTCTTGAGAAGGTACAAGTCCTACCAGAATCACAACGGAAAATAAAGGGAAACTTGCAAACCCTCCTGTTAACCAGTTCCCATGATCCAGGAATGGTGTCCCTACTAAACAATGACATATTTCCCAGGTTGAGAAAATTAATTTTTTTTTGGTATGATACTTCCATCAAACAATTACCAAGTCTAGACCACCTCAGCAATCTCCATAGCCTGAAAATAAATACCTCCCTAGAACTTCCATCAGAAGCAAATGCGTTTCCATCAAATCTTACCAAGGTAACCTTCCAAGAAATATATGGGGAATCTGCACCCTTGTTTCTGAAGAATATGAAGGCTGTAGGACAACTTGCCAGCCTCCAAATTTTGAAACTAAAAGGGTTTTATCATGAGATTTGGTTTGACCTTAATGTTGACGCTGGAGAGTTCCCACAACTAAAAGTGTTTCAAATGAGTGGAATTCTAATCAATAGTTGGATATTAAAGGAAGGTGCAATGCCGTGTCTCCAAAATGTGGTCATCAAGGACTGCTCTTTGTTGAGATGGATTTCTGAACAACTCTGGTCTATCACTACCTTACGAGAAGTGCATGTTTTGAACCCGCGCAAACAATTAGCTGACAGACTCCGAAGGGTGGAGTTGAAGAATAGTTGTAAGCTCGTAATCTCAGGGGTTGTCAGGGAAAGCGAAGATGCGGTTTGGTCAGAAGGAGAAGATATAAATTAA 2688 0.4282 MADAVVSSLLQNLSQLLRDEFKLLSGVKDKINSLRNDLRFIDIFLKRSMDNRNDDLVKEVVNQIRDVAFKAEDVVDIYVATIAEHRSRNIVSKLFHLKERFMVLHEVNDEIEKIKNRIEEIYKNRERYCITERASTSEDVDAIAAKSLRERRKDVEEKDVVGFVNDLNFVIEKLVEEGDSGRKVASIVGMGGLGKTTFARKIYNNEQVKKCFPLRAWGYVSNDYRARELLLSLLKCLLSTSEYDDLFKKKEDEVEDIAGSEEKLKTKVRECLKGKKYFVVLDDIWNTEVWNSIEDAFADDDDGSVGRILITSREMEVGNYVGTISPYHLPFLSVEESWHLFSKKVFRGNECPSDLEPLGRSIVESCKGLPLAIVVLAGHVAKKEKSQREWTKIKNITWHLTQDKIQVMNILRLSYDSLPRRLKPCFLYFGIYPEDYEIRARDVIQMWIAEGFIQLHEAGIPSPAEPEDVAECYLDELVDRSLVQVASRKSDGRVKTCRIHDLLRDLCISESKSEKFMEVCTDPNDMDTLGNATPRRLSIQSKVTSNESGYNANLSCARSFFFFSDETDYSMDLGEKSLKLARVVYLKCEQFCLFSLPPVDRKMVHLRYLRVDKMDLSIPASIRNLMNLETLDVRFAEMVSIEIWKLKRLKHLYIRSLEKVQVLPESQRKIKGNLQTLLLTSSHDPGMVSLLNNDIFPRLRKLIFFWYDTSIKQLPSLDHLSNLHSLKINTSLELPSEANAFPSNLTKVTFQEIYGESAPLFLKNMKAVGQLASLQILKLKGFYHEIWFDLNVDAGEFPQLKVFQMSGILINSWILKEGAMPCLQNVVIKDCSLLRWISEQLWSITTLREVHVLNPRKQLADRLRRVELKNSCKLVISGVVRESEDAVWSEGEDIN* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2647 895 Gene3D - 1 127 - -
Apr4g2647 895 Gene3D Ribonuclease Inhibitor 572 864 IPR032675 -
Apr4g2647 895 Gene3D - 137 324 IPR027417 -
Apr4g2647 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 429 IPR027417 -
Apr4g2647 895 CDD RX-CC_like 2 121 IPR038005 -
Apr4g2647 895 SUPERFAMILY L domain-like 488 852 - -
Apr4g2647 895 Gene3D - 331 414 IPR042197 -
Apr4g2647 895 Pfam Rx N-terminal domain 5 87 IPR041118 -
Apr4g2647 895 PRINTS Disease resistance protein signature 184 199 - -
Apr4g2647 895 PRINTS Disease resistance protein signature 271 285 - -
Apr4g2647 895 PRINTS Disease resistance protein signature 366 380 - -
Apr4g2647 895 PRINTS Disease resistance protein signature 623 639 - -
Apr4g2647 895 PANTHER - 50 876 - -
Apr4g2647 895 Pfam NB-ARC domain 167 416 IPR002182 GO:0043531
Apr4g2647 895 Coils Coil 104 124 - -
Apr4g2647 895 Gene3D - 415 511 IPR036388 -
Apr4g2647 895 PANTHER DISEASE RESISTANCE PROTEIN RP 50 876 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2647 Apr-Chr4 35215652 35219034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2647 171 506 WRKY Transcription Factor Family AT5G45050 24.189 6.01e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2647 - - aprc:113862567 1149.81